cluster # 1752

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Oryza sativa
cluster # 1752 cluster # 1752 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1752#0 length = 699 sequences # 2

consensusID : consensus_1752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 699
fasta sequence

                              [AGTTCACAACTTTTTGGAGAAGTTGAATCCTTTGATCTTTAAATCAATTGAGAGTAGACAAGGGGGGTGCTACTCGACCNGNGANNNGGGTGNTGCCNTCAGCTACCCCCCATTTGTGCATTCTTGNGAAGTCTGAATGGNAATTCGNGTGTTTGGNATTGTTGATCTGTATCTTCTTTGTCAATAATTGCCATGGTAATTCTAGAGATAGTTCTGTTCATTATGAAGAGCATTTATCAGNNNGGGGCTTTGTAATCTTACCTGTGTTGATTGGTCTTGCAAAAGATATCAGCAAGTCCCTTTCTGTCAACGTCTGTTCCAGCTGGNTGATCT-CCAGAAGCAACTGGTACTAAATGATCAACATAGCTTGCAATTTTGTACATTTTCATGTGGGTTTTTGGTGAGCCTGCTAAGGGGAAAAACATTGAGTATCTTCAGCTCAGCAAATCTTCCAAGGNAGAACTTGTTTTACATCAGNTACTTTTAAATATGNCCATGAATTGGTAGTTTAGGGTCCTGNCTAGNGNAGAGAANCTAANNTTGNTACNTCATATANGGGCCCACTCCCATATGNCCTAAAATATAGCCACCNAANAANCTTTTTTGAGGNAGAANCCTTCNTTTCCTTCCTCNCTANCGGNGCTAAGCATTGGGNTCCCAGGGNAAAAAAGGGGGACCTGGGATATATTCCNCCCTATT]

[+] EMBL CA765559             [                                                       AGACAAGGGGGGTGCTACTCGACCNGNGANNNGGGTGNTGCCNTCAGCTACCCCCCATTTGTGCATTCTTGNGAAGTCTGAATGGNAATTCGNGTGTTTGGNATTGTTGATCTGTATCTTCTTTGTCAATAATTGCCATGGTAATTCTAGAGATAGTTCTGTTCATTATGAAGAGCATTTATCAGNNNGGGGCTTTGTAATCTTACCTGTGTTGATTGGTCTTGCAAAAGATATCAGCAAGTCCCTTTCTGTCAACGTCTGTTCCAGCTGGNTGATCT CCAGAAGCAACTGGTACTAAATGATCAACATAGCTTGCAATTTTGTACATTTTCATGTGGGTTTTTGGTGAGCCTGCTAAGGGGAAAAACATTGAGTATCTTCAGCTCAGCAAATCTTCCAAGGNAGAACTTGTTTTACATCAGNTACTTTTAAATATGNCCATGAATTGGTAGTTTAGGGTCCTGNCTAGNGNAGAGAANCTAANNTTGNTACNTCATATANGGGCCCACTCCCATATGNCCTAAAATATAGCCACCNAANAANCTTTTTTGAGGNAGAANCCTTCNTTTCCTTCCTCNCTANCGGNGCTAAGCATTGGGNTCCCAGGGNAAAAAAGGGGGACCTGGGATATATTCCNCCCTATT]
[+] EMBL BI813222             [agttcacaactttttggagaagttgaatcctttgatctttaaatcaattgagagttttgcttatGGGTGCTACTCGACCTTTGAATTGGCTGTTGCCATCAGCTACCCCCCATTTGTGCATTCTTGTGAAGTCTGAATGGTAATTCGTGTGTTTGGTATTGTTGATCTGTATCTTCTTTGTCAATAATTGCCATGGTAATTCTAGAGATAGTTCTGTTCATTATGAAGAGCATTTATCAGCACATGACTTTGTAATCTTACCTGTGTTGATTGGTCTTGC AAAGATATCAGCAAGTCCCTTTCTGTCAACGTCTGTTCCAGCTGGTTGATCTGCCAGAAGCAACTGGTACTAAATGATCAACATAGCTTGCAATTTTGTACATTTTCATGT GGTTTTTGTTGAGCCTGCTAAGGGGAAAAACATTGAGTATCTTCAGCTCAGCAAATCTTCCAAGGAAGAACTTGTTTTAaaaaa                                                                                                                                                                                                                               ]




>consensus_1752#0
AGTTCACAACTTTTTGGAGAAGTTGAATCCTTTGATCTTTAAATCAATTGAGAGTAGACA
AGGGGGGTGCTACTCGACCNGNGANNNGGGTGNTGCCNTCAGCTACCCCCCATTTGTGCA
TTCTTGNGAAGTCTGAATGGNAATTCGNGTGTTTGGNATTGTTGATCTGTATCTTCTTTG
TCAATAATTGCCATGGTAATTCTAGAGATAGTTCTGTTCATTATGAAGAGCATTTATCAG
NNNGGGGCTTTGTAATCTTACCTGTGTTGATTGGTCTTGCAAAAGATATCAGCAAGTCCC
TTTCTGTCAACGTCTGTTCCAGCTGGNTGATCTCCAGAAGCAACTGGTACTAAATGATCA
ACATAGCTTGCAATTTTGTACATTTTCATGTGGGTTTTTGGTGAGCCTGCTAAGGGGAAA
AACATTGAGTATCTTCAGCTCAGCAAATCTTCCAAGGNAGAACTTGTTTTACATCAGNTA
CTTTTAAATATGNCCATGAATTGGTAGTTTAGGGTCCTGNCTAGNGNAGAGAANCTAANN
TTGNTACNTCATATANGGGCCCACTCCCATATGNCCTAAAATATAGCCACCNAANAANCT
TTTTTGAGGNAGAANCCTTCNTTTCCTTCCTCNCTANCGGNGCTAAGCATTGGGNTCCCA
GGGNAAAAAAGGGGGACCTGGGATATATTCCNCCCTATT

clustalw multiple alignements is not computed in this case