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Oryza sativa
cluster # 1759 cluster # 1759       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1759#0 length = 1310 sequences # 2  

consensusID : consensus_1759#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1310
fasta sequence
                              [AAACCTTTAAACGCGAACCGACTGCGAGTAGTAAGTAAGGCTAAGCATCCGTCTCCCCCCTTCTCGATTGTTCTCGATCTGCGGCGGCGGCGGCGGCGGCGGCGATGGCCGACGGCGGGAAGCCCCCGACGCCGGAGAAGAAGTCGTGGGCCGACGTAGAGGAGGAGGAGGAGGCCAAGGCGAAGGCGGCCGCGGCGGCGGAGGCGGCCTCCTCGTCTTCGTCGAACGAGCCGGCGGTGGACGCGCAGGCAAAGCAGATTGAGGCGCTGTCTCTCTCCGTGCCGGAGGAGCATGGCGGCAGCGGCGGCGGCGGGGACGACCAGGGCCCGCCTCTCCTCGACGACTCGGATGAGTCCCAAATCCAAGCCGTGACCTCGGGCGGCACGGTGTACGAGTCGGCGGCGGCCTTCGAGGATCTGAAGCTGACGCCGGAGCTGCTCAAGGGGCTCCACGACGAGATGGGGTTCAGCCGGCCGAGTAAGATCCAGGCGGTGACCCTCCCCATGATCCTCACGCCGCCATACAAGGACCTGATCGCGCAGGCGCACAACGGCTCCGGGAAGACCACCTGCTTCGTCCTCGGCATGCTCAGCCGCGTCGACCCTAACCGGAAGGTCACGCAGGCCATCTGCATCTGCCCCACCAGGGAGCTTGCCCAGCAGAATAAATCGGTGCTTATGAGAATGGGGAAGTTTACTGGCATTACCTGTGCATGTGCGATCCCACCGGCTCAGAAAGATTATGTGCCGATCGCTAAAATGCCAAAGATTACTGACCAGGTGGTGATCGGCACTTCTGGGACACTTATGAAGTGGATTAATCATAAGAAGATCTTGACAAATGATATCAAGATACTTGTGTTTGATGAGGCAGACCATATGCTTGCCGAGGATGGCTTCAGGAGTGATTCTGAAAGGATTATGAGGGATATACAAAGAAGCGCTGGTGGCTGTCAGGTGCTTCTCTTTTCTGCGACATTCAATGAGAGAGTTAAAGAATTTGTAACAGGGGTCATTAAGGATGGGAAGTCAATATTTGTGAAGAAGGACGAGCTTACTTTGGAAAAAGTCAAGCAATATTAAGTCCAAGTCCCTGATGAAAGGGGCAAAATAGCAGTCATANAGGGACAGATNNTGAGTNTGGACAAAAAGTNGGACCNGGGTATCATNNNNTGTAGAACCANGCAAAGTACTAAGGATGGTCCCNTGCTTTGACATTAAGGAACTCGTATGCTCCCCAATCANGGGATCCTGACCCNTCAAGAGGGANNGATNATCNNGANTCCANANGTGGTACCCAAGGTCTAATTT]

[+] EMBL CB621854             [AAACCTTTAAACGCGAACCGACTGCGAGTAGTAAGTAAGGCTAAGCATCCGTCTCCCCCCTTCTCGATTGTTCTCGATCTGCGGCGGCGGCGGCGGCGGCGGCGATGGCCGACGGCGGGAAGCCCCCGACGCCGGAGAAGAAGTCGTGGGCCGACGTAGAGGAGGAGGAGGAGGCCAAGGCGAAGGCGGCCGCGGCGGCGGAGGCGGCCTCCTCGTCTTCGTCGAACGAGCCGGCGGTGGACGCGCAGGCAAAGCAGATTGAGGCGCTGTCTCTCTCCGTGCCGGAGGAGCATGGCGGCAGCGGCGGCGGCGGGGACGACCAGGGCCCGCCTCTCCTCGACGACTCGGATGAGTCCCAAATCCAAGCCGTGACCTCGGGCGGCACGGTGTACGAGTCGGCGGCGGCCTTCGAGGATCTGAAGCTGACGCCGGAGCTGCTCAAGGGGCTCCACGACGAGATGGGGTTCAGCCGGCCGAGTAAGATCCAGGCGGTGACCCTCCCCATGATCCTCACGCCGCCATACAAGGACCTGATCGCGCAGGCGCACAACGGCTCCGGGAAGACCACCTGCTTCGTCCTCGGCATGCTCAGCCGCGTCGACCCTAACCGGAAGGTCACGCAGGCCATCTGCATCTGCCCCACCAGGGAGCTTGCCCAGCAGAATAAATCGGTGCTTATGAGAATGGGGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CA753013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGGTCACGCAGGCCATCTGCATCTGCCCCACCAGGGAGCTTGCCCAGCAGAATAAATCGGTGCTTATGAGAATGGGGAAGTTTACTGGCATTACCTGTGCATGTGCGATCCCACCGGCTCAGAAAGATTATGTGCCGATCGCTAAAATGCCAAAGATTACTGACCAGGTGGTGATCGGCACTTCTGGGACACTTATGAAGTGGATTAATCATAAGAAGATCTTGACAAATGATATCAAGATACTTGTGTTTGATGAGGCAGACCATATGCTTGCCGAGGATGGCTTCAGGAGTGATTCTGAAAGGATTATGAGGGATATACAAAGAAGCGCTGGTGGCTGTCAGGTGCTTCTCTTTTCTGCGACATTCAATGAGAGAGTTAAAGAATTTGTAACAGGGGTCATTAAGGATGGGAAGTCAATATTTGTGAAGAAGGACGAGCTTACTTTGGAAAAAGTCAAGCAATATTAAGTCCAAGTCCCTGATGAAAGGGGCAAAATAGCAGTCATANAGGGACAGATNNTGAGTNTGGACAAAAAGTNGGACCNGGGTATCATNNNNTGTAGAACCANGCAAAGTACTAAGGATGGTCCCNTGCTTTGACATTAAGGAACTCGTATGCTCCCCAATCANGGGATCCTGACCCNTCAAGAGGGANNGATNATCNNGANTCCANANGTGGTACCCAAGGTCTAATTT]


>consensus_1759#0 AAACCTTTAAACGCGAACCGACTGCGAGTAGTAAGTAAGGCTAAGCATCCGTCTCCCCCC TTCTCGATTGTTCTCGATCTGCGGCGGCGGCGGCGGCGGCGGCGATGGCCGACGGCGGGA AGCCCCCGACGCCGGAGAAGAAGTCGTGGGCCGACGTAGAGGAGGAGGAGGAGGCCAAGG CGAAGGCGGCCGCGGCGGCGGAGGCGGCCTCCTCGTCTTCGTCGAACGAGCCGGCGGTGG ACGCGCAGGCAAAGCAGATTGAGGCGCTGTCTCTCTCCGTGCCGGAGGAGCATGGCGGCA GCGGCGGCGGCGGGGACGACCAGGGCCCGCCTCTCCTCGACGACTCGGATGAGTCCCAAA TCCAAGCCGTGACCTCGGGCGGCACGGTGTACGAGTCGGCGGCGGCCTTCGAGGATCTGA AGCTGACGCCGGAGCTGCTCAAGGGGCTCCACGACGAGATGGGGTTCAGCCGGCCGAGTA AGATCCAGGCGGTGACCCTCCCCATGATCCTCACGCCGCCATACAAGGACCTGATCGCGC AGGCGCACAACGGCTCCGGGAAGACCACCTGCTTCGTCCTCGGCATGCTCAGCCGCGTCG ACCCTAACCGGAAGGTCACGCAGGCCATCTGCATCTGCCCCACCAGGGAGCTTGCCCAGC AGAATAAATCGGTGCTTATGAGAATGGGGAAGTTTACTGGCATTACCTGTGCATGTGCGA TCCCACCGGCTCAGAAAGATTATGTGCCGATCGCTAAAATGCCAAAGATTACTGACCAGG TGGTGATCGGCACTTCTGGGACACTTATGAAGTGGATTAATCATAAGAAGATCTTGACAA ATGATATCAAGATACTTGTGTTTGATGAGGCAGACCATATGCTTGCCGAGGATGGCTTCA GGAGTGATTCTGAAAGGATTATGAGGGATATACAAAGAAGCGCTGGTGGCTGTCAGGTGC TTCTCTTTTCTGCGACATTCAATGAGAGAGTTAAAGAATTTGTAACAGGGGTCATTAAGG ATGGGAAGTCAATATTTGTGAAGAAGGACGAGCTTACTTTGGAAAAAGTCAAGCAATATT AAGTCCAAGTCCCTGATGAAAGGGGCAAAATAGCAGTCATANAGGGACAGATNNTGAGTN TGGACAAAAAGTNGGACCNGGGTATCATNNNNTGTAGAACCANGCAAAGTACTAAGGATG GTCCCNTGCTTTGACATTAAGGAACTCGTATGCTCCCCAATCANGGGATCCTGACCCNTC AAGAGGGANNGATNATCNNGANTCCANANGTGGTACCCAAGGTCTAATTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)