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Oryza sativa
cluster # 177 cluster # 177       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_177#0 length = 2517 sequences # 2  

consensusID : consensus_177#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2517
fasta sequence
                              [CTACTGGCTTCAATTTATCTATAGCTAATCTAATAGCTTATTTATAGAATAGTTACATACTACACTATTAATATCTGGTCGCACATGTCATACACACAATGTGTCTTGCAGTTCGTGCTACAGTTGCTCTTCTCTCTTCTTATTTATCTCCTTAAAATATATTTGGAGCTGACTTATAGCCTGCTGTTATACATGCTCTAAGAGAAACTATAGATTATCCCCGATGATGGACAGAATCACAGGAGGTTCACTAGCAGCTTAGCTTGGGAGATTGAAGCCCACAAGGTGGATAGAGGATTTTTTGGAGGCGGAGATGAACCTGAGGCGGCTATGGGAGGTGTGGGGGGAGTGGGAGATCCGCGTGCTCGTCCTGTCCAGCCTGTCCCTGCAGGTCTTCCTCCTCTTCACCGGCGGCCTGCGCAAGCGCAAAGCCGCTTGGTGGCTGCGCATGCCGCTCTGGCTCGCCTACCTCCTCGCCGACTACATCGCCATCTACGCGCTGGGCAACCTTTCCAAGAAGCAGAAGCTCTGCGACGGCTCATTCGATGGCGAGATGCACCTCCTCGTCTTCTGGGCCCCTTTCCTCATCCTTCATCTCGGGGGGCAGGACACCATCACCGCCTTCGCCGTGGAGGACAACGAGCTCTGGCTGCGTCACTTCCTGAGCCTGCTGTCGCAGGTCGCGTTAGCCGGGTACGTCTACTGGAAGTCGCGGCCCAGCATGCGGCTCATGTCCCCGGCGATAATCATGTTCGTCGCCGGCGTCACCAAGTACGGCGAGCGGACGCTGGCGCTCAGGGCGGCGAGCATGGACTGCCTTCGCAGCTCCATGGTCACGCAGCCGGATCCGGGCCCGAACTACGCCAAATTCGTGGAGGAGTGCCAGTCGAGGACGGAGTCCGGACTGGTCGCCAAGATCGTCATCGTGCAGGAGCGGCCTCCAGATGACGAGGACCATGTCGAAGTCAAGCGAGAGGAGTACGGCGACCTGGTGTACAGTGCGCACAGGTTCTTTCACACCTTCCGCCGCCTCTTCGTCGACCTCATCCTCAGCTTCCAGGACCGCATCGACAGCCTCGCCTTCTTCCGGAGGTTGGAGATGGAGCAGGCGTACAAGGTGGTGGAGATCGAGCTGGTGCTCATGTACGAGTGCCTCCACTCCAAGGCACTCGTGATTCATGGTCTTCTCGGCCGCAGCCTACGCTTGTTCAGCCTCGCCGCGCCGGTCGTGTCGCTCGTGCTCTTCACCCGCGCGTTGGGCGACATGCGAGAAGGCTACAACCAGGTTGACATCAACATCTCCTTCGTCCTGCTGGGAGGAGCCATCTTCTTGGAGACATACGCGATCCTACTGATCTTCATCTCCTCCTGGACCTACACCGACATGCGCGGCAGAGAAGCGCTCCGGCCCGTGGCGGCGGCGGTGTTTTGGCTGATCGCCCTATTCCAGCCGGAGAAGAGGCCTAGGTGGTCGAACAAGATATCTCAGTACAACCTGATCAGCTATTGTGTCAAGGACAAGTCCCGTCGGTACAAGAAACCCATGGAGTGGCTGGAGTGGAGGTGGAACTTCCGCGTGAAGACGATGTGGGACAGCTGGAGGTACAAGACGAGCATCGGCGTGTCGGAGCTGCTGAAGAGCCACATCTTCGAACAGCTCAAGAGCAAAGCAAGCAGCATCAGCAAGGACCCCAAGAGCTACCGGAAGGCTGGCGAGCACCGTGGCCAGTGGGCGCTCCAGCGCAAGGGCCTCTACCAGAAGCTGGGCTGGAGCGTCGACTGCGAGTTTGACGAGAGCATCCTCCTCTGGCACATCGCCACAGACCTCTGCTTCTACGCCAATCATCCGGCGGACAAAGATGATGACGGATGCTGCAGCTGCTCCTCGTCGTCCAAGTGTCTCCGTTGCCTCTGCAGCTCCAGCTCGGGCTATCCTGATGCCGAGGCTCGAGGGCGTGACTCGAATAAGCTGGCGACGATGAGCAGGGAGATATCAAACTACATGCTGTTCCTGCTTGTCATGCGCCCGTTCATGATGACGGCCAGCATCGGGCAGATCCGCTTCGGCGACACCTGCTCGGAGGCCAAGAACTTCTTCCGGCGAGACGACGAGGAGATCGGGGACGAGGAGCGGTGTGCCAAGAGGCTCACGAAGGTGGACACGTCGATTGCAGAGCCGCGGGACGTGAAGGGGGACAGGAGCAAGTCGGTGCTCTTCCAGGCGTGCAAACTCGTGAGACAGCTCAACGAGCTGGAGGGCATCACGGAGGAGAGGAGGTGGAGGCTCATTGCTGGCGTGTGGGTGGAGATGCTATGCTACGCGGCCGGCAAGTGCAGCGGCAATGCCCACGCGAGGCAGCTCAGCCAGGGAGGCGAGATGCTCACCGTGGTGTGGCTGCTCATGGCGCATTTCGGAATGGGAGACCAGTATAGGGTGGAGTCTGGCCACGCCAGGGCCAAGCTTATTGTTCATCATAATCATAGTACCATGTAGGCCTGTTTGGTCCATTTTCTCTG]

[-] EMBL CB097011             [CTACTGGCTTCAATTTATCTATAGCTAATCTAATAGCTTATTTATAGAATAGTTACATACTACACTATTAATATCTGGTCGCACATGTCATACACACAATGTGTCTTGCAGTTCGTGCTACAGTTGCTCTTCTCTCTTCTTATTTATCTCCTTAAAATATATTTGGAGCTGACTTATAGCCTGCTGTTATACATGCTCTAAGAGAAACTATAGATTATCCCCGATGATGGACAGAATCACAGGAGGTTCACTAGCAGCTTAGCTTGGGAGATTGAAGCCCACAAGGTGGATAGAGGATTTTTTGGAGGCGGAGATGAACCTGAGGCGGCTATGGGAGGTGTGGGGGGAGTGGGAGATCCGCGTGCTCGTCCTGTCCAGCCTGTCCCTGCAGGTCTTCCTCCTCTTCACCGGCGGCCTGCGCAAGCGCAAAGCCGCTTGGTGGCTGCGCATGCCGCTCTGGCTCGCCTACCTCCTCGCCGACTACATCGCCATCTACGCGCTGGGCAACCTTTCCAAGAAGCAGAAGCTCTGCGACGGCTCATTCGATGGCGAGATGCACCTCCTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK102044             [                                                                                                                                                                                                                                                                                                          TTTTTGGAGGCGGAGATGAACCTGAGGCGGCTATGGGAGGTGTGGGGGGAGTGGGAGATCCGCGTGCTCGTCCTGTCCAGCCTGTCCCTGCAGGTCTTCCTCCTCTTCACCGGCGGCCTGCGCAAGCGCAAAGCCGCTTGGTGGCTGCGCATGCCGCTCTGGCTCGCCTACCTCCTCGCCGACTACATCGCCATCTACGCGCTGGGCAACCTTTCCAAGAAGCAGAAGCTCTGCGACGGCTCATTCGATGGCGAGATGCACCTCCTCGTCTTCTGGGCCCCTTTCCTCATCCTTCATCTCGGGGGGCAGGACACCATCACCGCCTTCGCCGTGGAGGACAACGAGCTCTGGCTGCGTCACTTCCTGAGCCTGCTGTCGCAGGTCGCGTTAGCCGGGTACGTCTACTGGAAGTCGCGGCCCAGCATGCGGCTCATGTCCCCGGCGATAATCATGTTCGTCGCCGGCGTCACCAAGTACGGCGAGCGGACGCTGGCGCTCAGGGCGGCGAGCATGGACTGCCTTCGCAGCTCCATGGTCACGCAGCCGGATCCGGGCCCGAACTACGCCAAATTCGTGGAGGAGTGCCAGTCGAGGACGGAGTCCGGACTGGTCGCCAAGATCGTCATCGTGCAGGAGCGGCCTCCAGATGACGAGGACCATGTCGAAGTCAAGCGAGAGGAGTACGGCGACCTGGTGTACAGTGCGCACAGGTTCTTTCACACCTTCCGCCGCCTCTTCGTCGACCTCATCCTCAGCTTCCAGGACCGCATCGACAGCCTCGCCTTCTTCCGGAGGTTGGAGATGGAGCAGGCGTACAAGGTGGTGGAGATCGAGCTGGTGCTCATGTACGAGTGCCTCCACTCCAAGGCACTCGTGATTCATGGTCTTCTCGGCCGCAGCCTACGCTTGTTCAGCCTCGCCGCGCCGGTCGTGTCGCTCGTGCTCTTCACCCGCGCGTTGGGCGACATGCGAGAAGGCTACAACCAGGTTGACATCAACATCTCCTTCGTCCTGCTGGGAGGAGCCATCTTCTTGGAGACATACGCGATCCTACTGATCTTCATCTCCTCCTGGACCTACACCGACATGCGCGGCAGAGAAGCGCTCCGGCCCGTGGCGGCGGCGGTGTTTTGGCTGATCGCCCTATTCCAGCCGGAGAAGAGGCCTAGGTGGTCGAACAAGATATCTCAGTACAACCTGATCAGCTATTGTGTCAAGGACAAGTCCCGTCGGTACAAGAAACCCATGGAGTGGCTGGAGTGGAGGTGGAACTTCCGCGTGAAGACGATGTGGGACAGCTGGAGGTACAAGACGAGCATCGGCGTGTCGGAGCTGCTGAAGAGCCACATCTTCGAACAGCTCAAGAGCAAAGCAAGCAGCATCAGCAAGGACCCCAAGAGCTACCGGAAGGCTGGCGAGCACCGTGGCCAGTGGGCGCTCCAGCGCAAGGGCCTCTACCAGAAGCTGGGCTGGAGCGTCGACTGCGAGTTTGACGAGAGCATCCTCCTCTGGCACATCGCCACAGACCTCTGCTTCTACGCCAATCATCCGGCGGACAAAGATGATGACGGATGCTGCAGCTGCTCCTCGTCGTCCAAGTGTCTCCGTTGCCTCTGCAGCTCCAGCTCGGGCTATCCTGATGCCGAGGCTCGAGGGCGTGACTCGAATAAGCTGGCGACGATGAGCAGGGAGATATCAAACTACATGCTGTTCCTGCTTGTCATGCGCCCGTTCATGATGACGGCCAGCATCGGGCAGATCCGCTTCGGCGACACCTGCTCGGAGGCCAAGAACTTCTTCCGGCGAGACGACGAGGAGATCGGGGACGAGGAGCGGTGTGCCAAGAGGCTCACGAAGGTGGACACGTCGATTGCAGAGCCGCGGGACGTGAAGGGGGACAGGAGCAAGTCGGTGCTCTTCCAGGCGTGCAAACTCGTGAGACAGCTCAACGAGCTGGAGGGCATCACGGAGGAGAGGAGGTGGAGGCTCATTGCTGGCGTGTGGGTGGAGATGCTATGCTACGCGGCCGGCAAGTGCAGCGGCAATGCCCACGCGAGGCAGCTCAGCCAGGGAGGCGAGATGCTCACCGTGGTGTGGCTGCTCATGGCGCATTTCGGAATGGGAGACCAGTATAGGGTGGAGTCTGGCCACGCCAGGGCCAAGCTTATTGTTCATCATAATCATAGTACCATGTAGGCCTGTTTGGTCCATTTTCTCTG]


>consensus_177#0 CTACTGGCTTCAATTTATCTATAGCTAATCTAATAGCTTATTTATAGAATAGTTACATAC TACACTATTAATATCTGGTCGCACATGTCATACACACAATGTGTCTTGCAGTTCGTGCTA CAGTTGCTCTTCTCTCTTCTTATTTATCTCCTTAAAATATATTTGGAGCTGACTTATAGC CTGCTGTTATACATGCTCTAAGAGAAACTATAGATTATCCCCGATGATGGACAGAATCAC AGGAGGTTCACTAGCAGCTTAGCTTGGGAGATTGAAGCCCACAAGGTGGATAGAGGATTT TTTGGAGGCGGAGATGAACCTGAGGCGGCTATGGGAGGTGTGGGGGGAGTGGGAGATCCG CGTGCTCGTCCTGTCCAGCCTGTCCCTGCAGGTCTTCCTCCTCTTCACCGGCGGCCTGCG CAAGCGCAAAGCCGCTTGGTGGCTGCGCATGCCGCTCTGGCTCGCCTACCTCCTCGCCGA CTACATCGCCATCTACGCGCTGGGCAACCTTTCCAAGAAGCAGAAGCTCTGCGACGGCTC ATTCGATGGCGAGATGCACCTCCTCGTCTTCTGGGCCCCTTTCCTCATCCTTCATCTCGG GGGGCAGGACACCATCACCGCCTTCGCCGTGGAGGACAACGAGCTCTGGCTGCGTCACTT CCTGAGCCTGCTGTCGCAGGTCGCGTTAGCCGGGTACGTCTACTGGAAGTCGCGGCCCAG CATGCGGCTCATGTCCCCGGCGATAATCATGTTCGTCGCCGGCGTCACCAAGTACGGCGA GCGGACGCTGGCGCTCAGGGCGGCGAGCATGGACTGCCTTCGCAGCTCCATGGTCACGCA GCCGGATCCGGGCCCGAACTACGCCAAATTCGTGGAGGAGTGCCAGTCGAGGACGGAGTC CGGACTGGTCGCCAAGATCGTCATCGTGCAGGAGCGGCCTCCAGATGACGAGGACCATGT CGAAGTCAAGCGAGAGGAGTACGGCGACCTGGTGTACAGTGCGCACAGGTTCTTTCACAC CTTCCGCCGCCTCTTCGTCGACCTCATCCTCAGCTTCCAGGACCGCATCGACAGCCTCGC CTTCTTCCGGAGGTTGGAGATGGAGCAGGCGTACAAGGTGGTGGAGATCGAGCTGGTGCT CATGTACGAGTGCCTCCACTCCAAGGCACTCGTGATTCATGGTCTTCTCGGCCGCAGCCT ACGCTTGTTCAGCCTCGCCGCGCCGGTCGTGTCGCTCGTGCTCTTCACCCGCGCGTTGGG CGACATGCGAGAAGGCTACAACCAGGTTGACATCAACATCTCCTTCGTCCTGCTGGGAGG AGCCATCTTCTTGGAGACATACGCGATCCTACTGATCTTCATCTCCTCCTGGACCTACAC CGACATGCGCGGCAGAGAAGCGCTCCGGCCCGTGGCGGCGGCGGTGTTTTGGCTGATCGC CCTATTCCAGCCGGAGAAGAGGCCTAGGTGGTCGAACAAGATATCTCAGTACAACCTGAT CAGCTATTGTGTCAAGGACAAGTCCCGTCGGTACAAGAAACCCATGGAGTGGCTGGAGTG GAGGTGGAACTTCCGCGTGAAGACGATGTGGGACAGCTGGAGGTACAAGACGAGCATCGG CGTGTCGGAGCTGCTGAAGAGCCACATCTTCGAACAGCTCAAGAGCAAAGCAAGCAGCAT CAGCAAGGACCCCAAGAGCTACCGGAAGGCTGGCGAGCACCGTGGCCAGTGGGCGCTCCA GCGCAAGGGCCTCTACCAGAAGCTGGGCTGGAGCGTCGACTGCGAGTTTGACGAGAGCAT CCTCCTCTGGCACATCGCCACAGACCTCTGCTTCTACGCCAATCATCCGGCGGACAAAGA TGATGACGGATGCTGCAGCTGCTCCTCGTCGTCCAAGTGTCTCCGTTGCCTCTGCAGCTC CAGCTCGGGCTATCCTGATGCCGAGGCTCGAGGGCGTGACTCGAATAAGCTGGCGACGAT GAGCAGGGAGATATCAAACTACATGCTGTTCCTGCTTGTCATGCGCCCGTTCATGATGAC GGCCAGCATCGGGCAGATCCGCTTCGGCGACACCTGCTCGGAGGCCAAGAACTTCTTCCG GCGAGACGACGAGGAGATCGGGGACGAGGAGCGGTGTGCCAAGAGGCTCACGAAGGTGGA CACGTCGATTGCAGAGCCGCGGGACGTGAAGGGGGACAGGAGCAAGTCGGTGCTCTTCCA GGCGTGCAAACTCGTGAGACAGCTCAACGAGCTGGAGGGCATCACGGAGGAGAGGAGGTG GAGGCTCATTGCTGGCGTGTGGGTGGAGATGCTATGCTACGCGGCCGGCAAGTGCAGCGG CAATGCCCACGCGAGGCAGCTCAGCCAGGGAGGCGAGATGCTCACCGTGGTGTGGCTGCT CATGGCGCATTTCGGAATGGGAGACCAGTATAGGGTGGAGTCTGGCCACGCCAGGGCCAA GCTTATTGTTCATCATAATCATAGTACCATGTAGGCCTGTTTGGTCCATTTTCTCTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)