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Oryza sativa
cluster # 1775 cluster # 1775       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1775#0 length = 1853 sequences # 2  

consensusID : consensus_1775#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1853
fasta sequence
                              [CAAGCTCTCGTCCTCCACCAATGTCGGCCACCACCACCGCGCCGTCCCCGACCCCGATCCCCATCACCACCATCGCCGAGCTGAGGCAGCACCACTCCCAGCTCGTCCGCCTCGGCCTCGCCTCCCACCCGCCCCACGCGCGCCGCCTCCTCGCCTTCCTCGCCCGCGACCCCGCCCACCTCCCCTACGCCGCGCGCCTCCTCGCCCACCACCCGGACCCCCGCCCCGCCCTCCTCAACCCGCTCTTCGCCTCCCTCCCGCCGCGCGCCGCCGCGTCGCTCCTCGCCCTCATGCTCTCCCTCCCGCTCCTCCACGACCACTTCACCTTCCCCCGCCTCCTCCCCGCCGCGCCGCTCCCGCTCGCCGCCCAGCTCCACGCGCTCCTCCTCAAGCTCAACCTCCACTCCCACGCCCACTCGCTCAACGCGCTCCTCGCCGCCTACCTCGCCGCCGCGCGCCCCGACCTCGCCCGCGTGCTCTTCCGCACCAGCGGCGGCGGCGCGCTCGACGTCGTGTCGTGGACGACAATGGTGGGCGGGCTGTGCAGGCTCGGCCTCGTGGACGATGCGCGGGAGGTGTTCGATGCGATGCCCGCGAGGAACCTGGTCTCCTGGAACTCCATGATCTCGGGCTACGTCAAGGCCGACCGGTTCTTGGATGCGTTGGAGGTGTTCGACGAAATGCGGGCGCTGGGAGTGGAGGGGAACGGGTTTGTGGCGACGAGCGCGCTGGTGGCTTGCACGGGCGCGGGCGCGCTGGGTCGCGGTAGGGAGATATACAGGTGGGTGGAGCAGAGCGGGATCGAGGTGGACGCCAAGCTGGCGACGGCGGTGGTCGACATGTACTGCAAGTGCGGGTGCGTCGACGAGGCATGGGGCGTGTTCGACTCGCTGCCGGCGAGGGGGCTCACGACGTGGAACTGCATGATCGGCGGGTTCGCGGTGCACGGGAGGTGCGACGACGCGCTCGAGCTATTCCACCAAATGGAGGCCGCAGGCGTGGCGCCCGACGACGTCACGCTGCTGAACGTGCTCACGGCGTGCGCGCACGCCGGCGAGGTCAGCGAAGGCCGCCGCTACCTCAACCACATCGTGTCTCGCCACGGCATCGAGCCCAAGGGAGAGCACTACGGCTGCATGGTCGACCTGTTCGGGAGAGCAGGCCAGCTAGACGAAGCCAAGAAGGTGATCGACGAAATGCCAATGGATCCCGACCTCGCCGTCCTCGGCGCGCTCCTCGGCGCATGCAAGATCCACGGCGACGTCGACCTCGGCGAGGCGATCGGGTGGCGCGTCATAGACCTCGACCCGGACAACAGCGGCCGCTACGTGCTCCTCGCAAACCTGCTCGCCGGCGCCGGCCGGTGGGACGAGGTGGGCAAGGTCCGGCGGCTGATGGACGAGCGGAACGTGAGCAAGGAGGCCGGGCGGTCGGTGATCGAGGTCGACGGCGAGGCCTGCGAGTTCCGGTGCGGGAACCTGCGCCACCCACAGGCTCGGGAGATCTACGCCATGGCCGTGGACATGGTGAGCAGGATCCGGGCCGAGGGGTACGTGCCGGACACCGGCGAGGCGCTGCACGACGTCGCCGAGGAAGACAAGGAGGCGGCGCTGCTGTGCCACAGCGAGAAGCTCGCGATCGCCTTCGGGCTGCTGCGCGCGAGGCCGCGCGAGACGCTGCGAATCACCAAGAACTTGAGAGTTTGTAGGGATTGCCACGAGGCGACCAAGTACGTGTCTCGCGTGTTTGGGCGTGAGATCGTGGTTAGGGACAGGAGCCGGTTCCATCATTTCAAGGATGGCATGTGTTCGTGTAAAGATTACTGGTAAGAAAAATAGACGTGATGATGCAGA]

[+] EMBL AK072084             [CAAGCTCTCGTCCTCCACCAATGTCGGCCACCACCACCGCGCCGTCCCCGACCCCGATCCCCATCACCACCATCGCCGAGCTGAGGCAGCACCACTCCCAGCTCGTCCGCCTCGGCCTCGCCTCCCACCCGCCCCACGCGCGCCGCCTCCTCGCCTTCCTCGCCCGCGACCCCGCCCACCTCCCCTACGCCGCGCGCCTCCTCGCCCACCACCCGGACCCCCGCCCCGCCCTCCTCAACCCGCTCTTCGCCTCCCTCCCGCCGCGCGCCGCCGCGTCGCTCCTCGCCCTCATGCTCTCCCTCCCGCTCCTCCACGACCACTTCACCTTCCCCCGCCTCCTCCCCGCCGCGCCGCTCCCGCTCGCCGCCCAGCTCCACGCGCTCCTCCTCAAGCTCAACCTCCACTCCCACGCCCACTCGCTCAACGCGCTCCTCGCCGCCTACCTCGCCGCCGCGCGCCCCGACCTCGCCCGCGTGCTCTTCCGCACCAGCGGCGGCGGCGCGCTCGACGTCGTGTCGTGGACGACAATGGTGGGCGGGCTGTGCAGGCTCGGCCTCGTGGACGATGCGCGGGAGGTGTTCGATGCGATGCCCGCGAGGAACCTGGTCTCCTGGAACTCCATGATCTCGGGCTACGTCAAGGCCGACCGGTTCTTGGATGCGTTGGAGGTGTTCGACGAAATGCGGGCGCTGGGAGTGGAGGGGAACGGGTTTGTGGCGACGAGCGCGCTGGTGGCTTGCACGGGCGCGGGCGCGCTGGGTCGCGGTAGGGAGATATACAGGTGGGTGGAGCAGAGCGGGATCGAGGTGGACGCCAAGCTGGCGACGGCGGTGGTCGACATGTACTGCAAGTGCGGGTGCGTCGACGAGGCATGGGGCGTGTTCGACTCGCTGCCGGCGAGGGGGCTCACGACGTGGAACTGCATGATCGGCGGGTTCGCGGTGCACGGGAGGTGCGACGACGCGCTCGAGCTATTCCACCAAATGGAGGCCGCAGGCGTGGCGCCCGACGACGTCACGCTGCTGAACGTGCTCACGGCGTGCGCGCACGCCGGCGAGGTCAGCGAAGGCCGCCGCTACCTCAACCACATCGTGTCTCGCCACGGCATCGAGCCCAAGGGAGAGCACTACGGCTGCATGGTCGACCTGTTCGGGAGAGCAGGCCAGCTAGACGAAGCCAAGAAGGTGATCGACGAAATGCCAATGGATCCCGACCTCGCCGTCCTCGGCGCGCTCCTCGGCGCATGCAAGATCCACGGCGACGTCGACCTCGGCGAGGCGATCGGGTGGCGCGTCATAGACCTCGACCCGGACAACAGCGGCCGCTACGTGCTCCTCGCAAACCTGCTCGCCGGCGCCGGCCGGTGGGACGAGGTGGGCAAGGTCCGGCGGCTGATGGACGAGCGGAACGTGAGCAAGGAGGCCGGGCGGTCGGTGATCGAGGTCGACGGCGAGGCCTGCGAGTTCCGGTGCGGGAACCTGCGCCACCCACAGGCTCGGGAGATCTACGCCATGGCCGTGGACATGGTGAGCAGGATCCGGGCCGAGGGGTACGTGCCGGACACCGGCGAGGCGCTGCACGACGTCGCCGAGGAAGACAAGGAGGCGGCGCTGCTGTGCCACAGCGAGAAGCTCGCGATCGCCTTCGGGCTGCTGCGCGCGAGGCCGCGCGAGACGCTGCGAATCACCAAGAACTTGAGAGTTTGTAGGGATTGCCACGAGGCGACCAAGTACGTGTCTCGCGTGTTTGGGCGTGAGATCGTGGTTAGGGACAGGAGCCGGTTCCATCATTTCAAGGATGGCATGTGTTCGTGTAAAGATTACTGGTAAGAAAAATAGACGTGATGATGCAGA]
[+] EMBL AK120621             [CAAGCTCTCGTCCTCCACCAATGTCGGCCACCACCACCGCGCCGTCCCCGACCCCGATCCCCATCACCACCATCGCCGAGCTGAGGCAGCACCACTCCCAGCTCGTCCGCCTCGGCCTCGCCTCCCACCCGCCCCACGCGCGCCGCCTCCTCGCCTTCCTCGCCCGCGACCCCGCCCACCTCCCCTACGCCGCGCGCCTCCTCGCCCACCACCCGGACCCCCGCCCCGCCCTCCTCAACCCGCTCTTCGCCTCCCTCCCGCCGCGCGCCGCCGCGTCGCTCCTCGCCCTCATGCTCTCCCTCCCGCTCCTCCACGACCACTTCACCTTCCCCCGCCTCCTCCCCGCCGCGCCGCTCCCGCTCGCCGCCCAGCTCCACGCGCTCCTCCTCAAGCTCAACCTCCACTCCCACGCCCACTCGCTCAACGCGCTCCTCGCCGCCTACCTCGCCGCCGCGCGCCCCGACCTCGCCCGCGTGCTCTTCCGCACCAGCGGCGGCGGCGCGCTCGACGTCGTGTCGTGGACGACAATGGTGGGCGGGCTGTGCAGGCTCGGCCTCGTGGACGATGCGCGGGAGGTGTTCGATGCGATGCCCGCGAGGAACCTGGTCTCCTGGAACTCCATGATCTCGGGCTACGTCAAGGCCGACCGGTTCTTGGATGCGTTGGAGGTGTTCGACGAAATGCGGGCGCTGGGAGTGGAGGGGAACGGGTTTGTGGCGACGAGCGCGCTGGTGGCTTGCACGGGCGCGGGCGCGCTGGGTCGCGGTAGGGAGATATACAGGTGGGTGGAGCAGAGCGGGATCGAGGTGGACGCCAAGCTGGCGACGGCGGTGGTCGACATGTACTGCAAGTGCGGGTGCGTCGACGAGGCATGGGGCGTGTTCGACTCGCTGCCGGCGAGGGGGCTCACGACGTGGAACTGCATGATCGGCGGGTTCGCGGTGCACGGGAGGTGCGACGACGCGCTCGAGCTATTCCACCAAATGGAGGCCGCAGGCGTGGCGCCCGACGACGTCACGCTGCTGAACGTGCTCACGGCGTGCGCGCACGCCGGCGAGGTCAGCGAAGGCCGCCGCTACCTCAACCACATCGTGTCTCGCCACGGCATCGAGCCCAAGGGAGAGCACTACGGCTGCATGGTCGACCTGTTCGGGAGAGCAGGCCAGCTAGACGAAGCCAAGAAGGTGATCGACGAAATGCCAATGGATCCCGACCTCGCCGTCCTCGGCGCGCTCCTCGGCGCATGCAAGATCCACGGCGACGTCGACCTCGGCGAGGCGATCGGGTGGCGCGTCATAGACCTCGACCCGGACAACAGCGGCCGCTACGTGCTCCTCGCAAACCTGCTCGCCGGCGCCGGCCGGTGGGACGAGGTGGGCAAGGTCCGGCGGCTGATGGACGAGCGGAACGTGAGCAAGGAGGCCGGGCGGTCGGTGATCGAGGTCGACGGCGAGGCCTGCGAGTTCCGGTGCGGGAACCTGCGCCACCCACAGGCTCGGGAGATCTACGCCATGGCCGTGGACATGGTGAGCAGGATCCGGGCCGAGGGGTACGTGCCGGACACCGGCGAGGCGCTGCACGACGTCGCCGAGGAAGACAAGGAGGCGGCGCTGCTGTGCCACAGCGAGAAGCTCGCGATCGCCTTCGGGCTGCTGCGCGCGAGGCCGCGCGAGACGCTGCGAATCACCAAGAACTTGAGAGTTTGTAGGGATTGCCACGAGGCGACCAAGTACGTGTCTCGCGTGTTTGGGCGTGAGATCGTGGTTAGGGACAGGAGCCGGTTCCATCATTTCAAGGATGGCATGTGTTCGTGTAAAGATTACTGGTAAGAAAAATAGACGTGATGATGCAGA]


>consensus_1775#0 CAAGCTCTCGTCCTCCACCAATGTCGGCCACCACCACCGCGCCGTCCCCGACCCCGATCC CCATCACCACCATCGCCGAGCTGAGGCAGCACCACTCCCAGCTCGTCCGCCTCGGCCTCG CCTCCCACCCGCCCCACGCGCGCCGCCTCCTCGCCTTCCTCGCCCGCGACCCCGCCCACC TCCCCTACGCCGCGCGCCTCCTCGCCCACCACCCGGACCCCCGCCCCGCCCTCCTCAACC CGCTCTTCGCCTCCCTCCCGCCGCGCGCCGCCGCGTCGCTCCTCGCCCTCATGCTCTCCC TCCCGCTCCTCCACGACCACTTCACCTTCCCCCGCCTCCTCCCCGCCGCGCCGCTCCCGC TCGCCGCCCAGCTCCACGCGCTCCTCCTCAAGCTCAACCTCCACTCCCACGCCCACTCGC TCAACGCGCTCCTCGCCGCCTACCTCGCCGCCGCGCGCCCCGACCTCGCCCGCGTGCTCT TCCGCACCAGCGGCGGCGGCGCGCTCGACGTCGTGTCGTGGACGACAATGGTGGGCGGGC TGTGCAGGCTCGGCCTCGTGGACGATGCGCGGGAGGTGTTCGATGCGATGCCCGCGAGGA ACCTGGTCTCCTGGAACTCCATGATCTCGGGCTACGTCAAGGCCGACCGGTTCTTGGATG CGTTGGAGGTGTTCGACGAAATGCGGGCGCTGGGAGTGGAGGGGAACGGGTTTGTGGCGA CGAGCGCGCTGGTGGCTTGCACGGGCGCGGGCGCGCTGGGTCGCGGTAGGGAGATATACA GGTGGGTGGAGCAGAGCGGGATCGAGGTGGACGCCAAGCTGGCGACGGCGGTGGTCGACA TGTACTGCAAGTGCGGGTGCGTCGACGAGGCATGGGGCGTGTTCGACTCGCTGCCGGCGA GGGGGCTCACGACGTGGAACTGCATGATCGGCGGGTTCGCGGTGCACGGGAGGTGCGACG ACGCGCTCGAGCTATTCCACCAAATGGAGGCCGCAGGCGTGGCGCCCGACGACGTCACGC TGCTGAACGTGCTCACGGCGTGCGCGCACGCCGGCGAGGTCAGCGAAGGCCGCCGCTACC TCAACCACATCGTGTCTCGCCACGGCATCGAGCCCAAGGGAGAGCACTACGGCTGCATGG TCGACCTGTTCGGGAGAGCAGGCCAGCTAGACGAAGCCAAGAAGGTGATCGACGAAATGC CAATGGATCCCGACCTCGCCGTCCTCGGCGCGCTCCTCGGCGCATGCAAGATCCACGGCG ACGTCGACCTCGGCGAGGCGATCGGGTGGCGCGTCATAGACCTCGACCCGGACAACAGCG GCCGCTACGTGCTCCTCGCAAACCTGCTCGCCGGCGCCGGCCGGTGGGACGAGGTGGGCA AGGTCCGGCGGCTGATGGACGAGCGGAACGTGAGCAAGGAGGCCGGGCGGTCGGTGATCG AGGTCGACGGCGAGGCCTGCGAGTTCCGGTGCGGGAACCTGCGCCACCCACAGGCTCGGG AGATCTACGCCATGGCCGTGGACATGGTGAGCAGGATCCGGGCCGAGGGGTACGTGCCGG ACACCGGCGAGGCGCTGCACGACGTCGCCGAGGAAGACAAGGAGGCGGCGCTGCTGTGCC ACAGCGAGAAGCTCGCGATCGCCTTCGGGCTGCTGCGCGCGAGGCCGCGCGAGACGCTGC GAATCACCAAGAACTTGAGAGTTTGTAGGGATTGCCACGAGGCGACCAAGTACGTGTCTC GCGTGTTTGGGCGTGAGATCGTGGTTAGGGACAGGAGCCGGTTCCATCATTTCAAGGATG GCATGTGTTCGTGTAAAGATTACTGGTAAGAAAAATAGACGTGATGATGCAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)