cluster # 1782

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Oryza sativa
cluster # 1782 cluster # 1782 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1782#0 length = 1829 sequences # 2
consensusID : consensus_1782#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1829
fasta sequence
                              [AGCACTACCTGTCAGTACTCGGAGTAGCAAATTATCAATCTTTGCATGGACAAAGCTATGGCGTTCATCCCGCCGCGAGACCTCGTCGTCGTCCTCCCCTTCCTCGCGCTTCTCCTCCCCTTGTACATCTACCTGAGGTACTCGAGGAGTGCAAAGGCTAACCCGTCGCTTCCCACCGAGTGGCCGTTGGTCGGCATGCTCCCTTCCCTCGTTGCCAACATCCACAACCTGTTCGACTACGCCACCGCGCTCCTCGCCGCCTCCGGCAACAGCTTCGAGGCCCGCGGCCCGCCGATGTCCAGCCTCCGGTTCTTCGTGACGTGCGACCCGGACAACGTGCGCCACATCTTCATCAACAACTTCGCCAACTACCCCAAGGGCGAGGAGTTCGCCTCCTTCTTCGACGTCATGGGCGACAGCTTCTTCAACGCCGACGGCGAGTCGTGGCGCCGCCAGCGCGCCAGGGTGCAGCACGTCATGAGCAACCCGCGGCTGCTCGCGTCCATGGCCGCGTGCTGCCGCGGCAAGGTGGAGAAGGGCCTGCTGCCCATCCTGGACCGCATGGCGAGCGCCGGCGCGCCGTTCGACCTGCAGCGCCTGCTCACCAGGTTCGCGTTCGACGTGACGGCCATGGCGGTCTTTGGGGTGGACACGTGCCGCCTGTCCATCGACATGCCGCCGCTCGACGTCGCGAACGCCATGGACGCCGTCATGGAGGTCGGCTTCTTCCGGCACACCGTGCCGGTCTCTTGCTGGAAGCTGATGAGGAGTCTAAGAATCGGCCCGGAGAGGAAGCTCACAGCTGCACAGCGGTTGCTACGCCGGTTCGTCGCGGAGATGATCGAGAAAAGACGAGTAGCCGGCGGCGCCTGCAAGGCCACCGACGACGAGCAAGGAGGTGTACCGCCGCCGGCGGACATCGTGTCCTCCTACATCAACGACCCGGAGTACGTCGACGAGGACGGGAACCCCAGGGAGTTCATGTACGCGACCTTCATCAACTACATGGTCGCCGGGCGCGACACGGTCGGCACTGCGCTGTCGTGGCTCTTCTTCAACCTCACCGAGCACCCGCGCGTCGTGGCGAGAATCAGGGAGGAGCTGGAGCCGATCGCGTCGAGCAAAGCCGGCGGCGGCGGCATGGTGGTGTTCGACCCCGAGGAGACGAAGCCCCTGGTGTACCTGCAGGCGGCGCTGTTCGAGTCGATGCGGCTGTACCCGCCGGGGCCGATCGAGCGGAAGGCGACGCTGGCGGAAGACGTGCTCCCGAGTGGGCACACGGTGCGCGCGGGGGACAACATCCTGATACCGGTGTACTCCATGGGCAGGATGGCGAGCGTGTGGGGGAAGGACAGCGGCGAGTACAGGCCGGAGCGGTGGGTGACGGAGGACGGCAAACTGCGGCACGTGCCGGCGCACAGGTTCATGCCGTTCAACGCCGGG-CCGAGGCTGTGCCTCGGGAAGGACATCTCGGTGCTG-CAGATGAAGAGCGTCGCCGCCGCCGTGGCCTGGAACTTCGACCTCGAGGTGGTGGCCGGCCACGCCGTGGAGCCCAAGGTGTCGATCGTGATGCAGATCAAGAACGGCCTCATGGTGAAGGTGAAGAAGCGGTAGATCGACCGTGTGCCAATTAACCCATCGGTGAAAACATATCGTACGTGTTTGTACACGGGCATGTACGGTTTTCACTATGCATGGCCTACGTATCTCTATCACCGTGTTGTAAAATGTAAACGGTCTGTTCGATTTCACCAGGCGAGACCCTCTCTGTACGCTAGTTCTCACGTGTGTTCCATAAAAACGTTAGNGTTGAAAAAAAAAAAAAAAAA]

[+] EMBL AK105857             [AGCACTACCTGTCAGTACTCGGAGTAGCAAATTATCAATCTTTGCATGGACAAAGCTATGGCGTTCATCCCGCCGCGAGACCTCGTCGTCGTCCTCCCCTTCCTCGCGCTTCTCCTCCCCTTGTACATCTACCTGAGGTACTCGAGGAGTGCAAAGGCTAACCCGTCGCTTCCCACCGAGTGGCCGTTGGTCGGCATGCTCCCTTCCCTCGTTGCCAACATCCACAACCTGTTCGACTACGCCACCGCGCTCCTCGCCGCCTCCGGCAACAGCTTCGAGGCCCGCGGCCCGCCGATGTCCAGCCTCCGGTTCTTCGTGACGTGCGACCCGGACAACGTGCGCCACATCTTCATCAACAACTTCGCCAACTACCCCAAGGGCGAGGAGTTCGCCTCCTTCTTCGACGTCATGGGCGACAGCTTCTTCAACGCCGACGGCGAGTCGTGGCGCCGCCAGCGCGCCAGGGTGCAGCACGTCATGAGCAACCCGCGGCTGCTCGCGTCCATGGCCGCGTGCTGCCGCGGCAAGGTGGAGAAGGGCCTGCTGCCCATCCTGGACCGCATGGCGAGCGCCGGCGCGCCGTTCGACCTGCAGCGCCTGCTCACCAGGTTCGCGTTCGACGTGACGGCCATGGCGGTCTTTGGGGTGGACACGTGCCGCCTGTCCATCGACATGCCGCCGCTCGACGTCGCGAACGCCATGGACGCCGTCATGGAGGTCGGCTTCTTCCGGCACACCGTGCCGGTCTCTTGCTGGAAGCTGATGAGGAGTCTAAGAATCGGCCCGGAGAGGAAGCTCACAGCTGCACAGCGGTTGCTACGCCGGTTCGTCGCGGAGATGATCGAGAAAAGACGAGTAGCCGGCGGCGCCTGCAAGGCCACCGACGACGAGCAAGGAGGTGTACCGCCGCCGGCGGACATCGTGTCCTCCTACATCAACGACCCGGAGTACGTCGACGAGGACGGGAACCCCAGGGAGTTCATGTACGCGACCTTCATCAACTACATGGTCGCCGGGCGCGACACGGTCGGCACTGCGCTGTCGTGGCTCTTCTTCAACCTCACCGAGCACCCGCGCGTCGTGGCGAGAATCAGGGAGGAGCTGGAGCCGATCGCGTCGAGCAAAGCCGGCGGCGGCGGCATGGTGGTGTTCGACCCCGAGGAGACGAAGCCCCTGGTGTACCTGCAGGCGGCGCTGTTCGAGTCGATGCGGCTGTACCCGCCGGGGCCGATCGAGCGGAAGGCGACGCTGGCGGAAGACGTGCTCCCGAGTGGGCACACGGTGCGCGCGGGGGACAACATCCTGATACCGGTGTACTCCATGGGCAGGATGGCGAGCGTGTGGGGGAAGGACAGCGGCGAGTACAGGCCGGAGCGGTGGGTGACGGAGGACGGCAAACTGCGGCACGTGCCGGCGCACAGGTTCATGCCGTTCAACGCCGGG CCGAGGCTGTGCCTCGGGAAGGACATCTCGGTGCTG CAGATGAAGAGCGTCGCCGCCGCCGTGGCCTGGAACTTCGACCTCGAGGTGGTGGCCGGCCACGCCGTGGAGCCCAAGGTGTCGATCGTGATGCAGATCAAGAACGGCCTCATGGTGAAGGTGAAGAAGCGGTAGATCGACCGTGTGCCAATTAACCCATCGGTGAAAACATATCGTACGTGTTTGTACACGGGCATGTACGGTTTTCACTATGCATGGCCTACG                                                                                                                             ]
[+] EMBL AU031131             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GACGGCAAACTGCGGCACGTGCCGGCGCACAGGTTCATGCCGTTCAACGCCGGGCCCGAGGCTNTNCCTCGGGAAGGACATCTCGGTGCTGCCAGATGAAGAGCGTCGCCGCCGCCGTGGCCTGGAACTTCGACCTCGAGGTGGTGGCCGGCCACGCCGTGGAGCCCAAGGTGTCGATCGTGATGCAGATCAAGAACGGCCTCATGGTGAAGGTGAAGAAGCGGTAGATCGACCGTGTGCCAATTAACCCATCGGTGAAAACATATCGTACGTGTTTGTACACGGGCATGTACGGTTTTCACTATGCATGGCCTACGTATCTCTATCACCGTGTTGTAAAATGTAAACGGTCTGTTCGATTTCACCAGGCGAGACCCTCTCTGTACGCTAGTTCTCACGTGTGTTCCATAAAAACGTTAGNGTTGAAAAAAAAAAAAAAAAA]




>consensus_1782#0
AGCACTACCTGTCAGTACTCGGAGTAGCAAATTATCAATCTTTGCATGGACAAAGCTATG
GCGTTCATCCCGCCGCGAGACCTCGTCGTCGTCCTCCCCTTCCTCGCGCTTCTCCTCCCC
TTGTACATCTACCTGAGGTACTCGAGGAGTGCAAAGGCTAACCCGTCGCTTCCCACCGAG
TGGCCGTTGGTCGGCATGCTCCCTTCCCTCGTTGCCAACATCCACAACCTGTTCGACTAC
GCCACCGCGCTCCTCGCCGCCTCCGGCAACAGCTTCGAGGCCCGCGGCCCGCCGATGTCC
AGCCTCCGGTTCTTCGTGACGTGCGACCCGGACAACGTGCGCCACATCTTCATCAACAAC
TTCGCCAACTACCCCAAGGGCGAGGAGTTCGCCTCCTTCTTCGACGTCATGGGCGACAGC
TTCTTCAACGCCGACGGCGAGTCGTGGCGCCGCCAGCGCGCCAGGGTGCAGCACGTCATG
AGCAACCCGCGGCTGCTCGCGTCCATGGCCGCGTGCTGCCGCGGCAAGGTGGAGAAGGGC
CTGCTGCCCATCCTGGACCGCATGGCGAGCGCCGGCGCGCCGTTCGACCTGCAGCGCCTG
CTCACCAGGTTCGCGTTCGACGTGACGGCCATGGCGGTCTTTGGGGTGGACACGTGCCGC
CTGTCCATCGACATGCCGCCGCTCGACGTCGCGAACGCCATGGACGCCGTCATGGAGGTC
GGCTTCTTCCGGCACACCGTGCCGGTCTCTTGCTGGAAGCTGATGAGGAGTCTAAGAATC
GGCCCGGAGAGGAAGCTCACAGCTGCACAGCGGTTGCTACGCCGGTTCGTCGCGGAGATG
ATCGAGAAAAGACGAGTAGCCGGCGGCGCCTGCAAGGCCACCGACGACGAGCAAGGAGGT
GTACCGCCGCCGGCGGACATCGTGTCCTCCTACATCAACGACCCGGAGTACGTCGACGAG
GACGGGAACCCCAGGGAGTTCATGTACGCGACCTTCATCAACTACATGGTCGCCGGGCGC
GACACGGTCGGCACTGCGCTGTCGTGGCTCTTCTTCAACCTCACCGAGCACCCGCGCGTC
GTGGCGAGAATCAGGGAGGAGCTGGAGCCGATCGCGTCGAGCAAAGCCGGCGGCGGCGGC
ATGGTGGTGTTCGACCCCGAGGAGACGAAGCCCCTGGTGTACCTGCAGGCGGCGCTGTTC
GAGTCGATGCGGCTGTACCCGCCGGGGCCGATCGAGCGGAAGGCGACGCTGGCGGAAGAC
GTGCTCCCGAGTGGGCACACGGTGCGCGCGGGGGACAACATCCTGATACCGGTGTACTCC
ATGGGCAGGATGGCGAGCGTGTGGGGGAAGGACAGCGGCGAGTACAGGCCGGAGCGGTGG
GTGACGGAGGACGGCAAACTGCGGCACGTGCCGGCGCACAGGTTCATGCCGTTCAACGCC
GGGCCGAGGCTGTGCCTCGGGAAGGACATCTCGGTGCTGCAGATGAAGAGCGTCGCCGCC
GCCGTGGCCTGGAACTTCGACCTCGAGGTGGTGGCCGGCCACGCCGTGGAGCCCAAGGTG
TCGATCGTGATGCAGATCAAGAACGGCCTCATGGTGAAGGTGAAGAAGCGGTAGATCGAC
CGTGTGCCAATTAACCCATCGGTGAAAACATATCGTACGTGTTTGTACACGGGCATGTAC
GGTTTTCACTATGCATGGCCTACGTATCTCTATCACCGTGTTGTAAAATGTAAACGGTCT
GTTCGATTTCACCAGGCGAGACCCTCTCTGTACGCTAGTTCTCACGTGTGTTCCATAAAA
ACGTTAGNGTTGAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case