cluster # 1784

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1784 cluster # 1784 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1784#0 length = 687 sequences # 2

consensusID : consensus_1784#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 687
fasta sequence

                              [TTTTTTTTTTTTTTTTCAATAAGAGAATATTAAAAATTGATTATACGTCCAGGCTCCAAGCGGCGCCAAAAAAGGGAAGCGAAAAAATATAGACTAACGGAAAATAAGGCAATGAAATCTGATGCATATTTATAGCTAATCAACTCCGGCAACTTGCACCGATTAGCTGGCATCTTGATCACAATTTACAAACAAGACCGAGCAATAAACAGTCCTTTTTGCCGTCTGTGTCCAAACCATCCTTTTTGCCTGCTAGCTATTTGCACAAGGCTGAACTAATAATTGATTAATTAACTAAAAACTAAATTACAAAACGATGCAGGGGTTTAAGCTATAGCACTAAGGCCACCATGAGCTTCAGTCGCCCAGCTACAGGGTTCCCCATCTCTGAAAACAAAAGGGAACAGCATTGGGATCAATTCCATAAAGAATCATGATACTCTGTAAAGGCATTAAAAAAAACCCTTTGTGGTGCTGATTAGAAACATGACCTGCTTACAGGGACATAATGCTCAAATCTAAGGTTGTGAAAATAAAACTTGTGATAGAACTAACCATCGAAAATACTGTTATGAAACTTCCATTTTTCTGCACAATATCTCAGACCAAAGCAGGACCATCAAGTTAAAATCCGTACATATTACCAGACTTAACCGGGAACTTAGATCAGCGCCGCTGGAATTTTTT]

[+] EMBL CA761618             [TTTTTTTTTTTTTTTTCAATAAGAGAATATTAAAAATTGATTATACGTCCAGGCTCCAAGCGGCGCCAAAAAAGGGAAGCGAAAAAATATAGACTAACGGAAAATAAGGCAATGAAATCTGATGCATATTTATAGCTAATCAACTCCGGCAACTTGCACCGATTAGCTGGCATCTTGATCACAATTTACAAACAAGACCGAGCAATAAACAGTCCTTTTTGCCGTCTGTGTCCAAACCATCCTTTTTGCCTGCTAGCTATTTGCACAAGGCTGAACTAATAATTGATTAATTAACTAAAAACTAAATTACAAAACGATGCAGGGGTTTAAGCTATAGCACTAAGGCCACCATGAGCTTCAGTCGCCCAGCTACAGGGTTCCCCATCTCTGAAAACAAAAGGGAACAGCATTGGGATCAATTCCATAAAGAATCATGATACTCTGTAAAGGCATTAAAAAAAACCCTTTGTGGTGCTGATTAGAAACATGACCTGCTTACAGGGACATAATGCTCAAATCTAAGGTTGTGAAAATAAAACTTGTGATAGAACTAACCATCGAAAATACTGTTATGAAACTTCCATTTTTCTGCACAATATCTCAGACCAAAGCAGGACCATCAAGTTAAAATCCGTACATATTACCAGACTTAACCGGGAACTTAGATCAGCGCCGCTGGAATTTTTT]
[-] EMBL OS1831A              [                              TAGAAATTGATTATACGTCCAGGCTCCAAGCGGCGCCGAAAAATGGAAGCGAAAAAATATAGACTAACGGAAAATAATGCAATGAAATCTGATGCATATCTATAGCTAATCAACTCCGGCAACTTGCACCGATTAGCTGGCATCTTGATCACAATTTACAAACAAGACCGAGCAATAAACAGTCCTTTTTGCCGTCTGTGTCCAAACCATCCTTTTTGCCTGCTAGCTATTTGCACAATGCTGAACTAATAATTGATTAATTAACTAAGAACTAAATTACAAAACGATGCAAGTGTTTA                                                                                                                                                                                                                                                                                                                                                                      ]




>consensus_1784#0
TTTTTTTTTTTTTTTTCAATAAGAGAATATTAAAAATTGATTATACGTCCAGGCTCCAAG
CGGCGCCAAAAAAGGGAAGCGAAAAAATATAGACTAACGGAAAATAAGGCAATGAAATCT
GATGCATATTTATAGCTAATCAACTCCGGCAACTTGCACCGATTAGCTGGCATCTTGATC
ACAATTTACAAACAAGACCGAGCAATAAACAGTCCTTTTTGCCGTCTGTGTCCAAACCAT
CCTTTTTGCCTGCTAGCTATTTGCACAAGGCTGAACTAATAATTGATTAATTAACTAAAA
ACTAAATTACAAAACGATGCAGGGGTTTAAGCTATAGCACTAAGGCCACCATGAGCTTCA
GTCGCCCAGCTACAGGGTTCCCCATCTCTGAAAACAAAAGGGAACAGCATTGGGATCAAT
TCCATAAAGAATCATGATACTCTGTAAAGGCATTAAAAAAAACCCTTTGTGGTGCTGATT
AGAAACATGACCTGCTTACAGGGACATAATGCTCAAATCTAAGGTTGTGAAAATAAAACT
TGTGATAGAACTAACCATCGAAAATACTGTTATGAAACTTCCATTTTTCTGCACAATATC
TCAGACCAAAGCAGGACCATCAAGTTAAAATCCGTACATATTACCAGACTTAACCGGGAA
CTTAGATCAGCGCCGCTGGAATTTTTT

clustalw multiple alignements is not computed in this case