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Oryza sativa
cluster # 1806 cluster # 1806       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1806#0 length = 1667 sequences # 1  
consensus_1806#1 length = 1608 sequences # 1  

consensusID : consensus_1806#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1667
fasta sequence
                              [GGGCAGATTAAGATCGATGCAACAAGCAGAACGGCTAATCCGCAGCGTTGGACGACATGCACGTACGATCGCCGGCAAGGTCCATGGACACCTCCCTCTCCATCGCCGTCGCAGCCGCCGCCGTCGTGCTGCTGCTCCTCGTGCGGGGCGCCGATGCCGAGATCAGGACGACGCTCATCGTGTCGGACGCTCGGCCTCTCATTCTGTTCGAGCAGTTTGGCTTCGAGCGTGGCGGGAAGGCGACCATCTCCATACGCCGCTCGTTTTGGAATCTCCGGCGGGGGTCACGGCGCACCGCGGTTGACCCCAGCCTCATGGGGTTCGTCCTCATCTCCGGAACCCAGTTCCCGAAGATCAACAACGCGTCCGCGTACGCGGCCGCCGACCCGGGGGACAACGGCGACGACGGCGGGGGCAGTTACTGCGTGCTGACGAGCGAGTACGCCCTCCCGGTGCTCCGGCTCGGCGACGTCCCGCCCGGCGGCGTCACCACCACCGTGAGCATCGACGACCCAGACCAGTACGCCGTCGTGTTCAGCAACTGCCAGGACGGCGTGGAGGTCACCGTCGACGTGTACACCGAGATGTACAACGTGCGGGACGGCATCTCCGACGGGCCCAGGGACTACCTACCCGTGGGCCTGCGGCCGCTGCCGACCATCTACACGGTCGTGTCGGAGGTGTACTTCGCGTTCCTGGCGCTGTGGGCGTGCGTGTGCGTGCGGCACCGCGCGACGGTGGAGCGGATCCACGCCGTCATGGGCGCGCTGCTGCTGTTCAAGGCGCTCAAGATGGCGTGCGCGGCGGAGGACTCGTGGTACGTGGAGCGCACCGGCACGCCGCACGGCTGGGACGTGGCGTTCTACGTCTTCGGCTTCTTCAAGGGCGTCCTGCTCTTCACCGTCATCATCCTCATCGGCACCGGCTGGTCCATCCTCAAGCCCTACCTCCAGGAGAGGGAGAAGAACATGCTTATGATCGTGATCCCGCTGCAAGTGGTCGAGAACCTGTTGCTGGTGGTGATCGGGGAGACGGGGCCGACGGGGCAGGACTGGGTCGTGTGGAACCAGGTGTTCCTGCTGGTGGACGTCATCTGCTGCTGCGCCGTGTTCTTCCCGATCATCTGGTCGATCCGCAGCATGCGCGAGGCATCCAAGACCGATGGCAAGGCGGCGCTCAACCTCCAGAAGCTCACGCTGTTCAAGCGCTTCTACCTCGTCGTCGTCGGCTACCTCTACTTCACCCGGATCATCGCGTCGGCGTTCCTCGCCTTGCTCAGCTACAAGTACCAGTGGGGCGTCAACGTGGCCATCGAGGCCGCCAGCCTCGCCTTCTACCTGTTCGTTTTCTACAACTTCCAGCCGGTGGCGAAGAACCCGTACTTGTACATTGGCGACACGGTGGAGGACGCGGCGGTCGAGCGTGAGATGGACGACGAAGGTCGATTTTGAGCGCCCTCGTGGATCGTCCATATGATTTTTCCCCCCAAGTTTTATGCGTTTCATTAGTTGGCTAGCTGCGTTAATTGTGTACGACTATATGTTTCGTGCTCGATCGGAGCGTCAGGCTCGCGGATTGGCGTGTGCCTGAAACGGTGATGATGTGACGACTGGTGTGTCTCTCCCTTTTGTACAAGAAGGCATGCTCAACGGATCGGGAAATTAGCA]

[+] EMBL AK070657             [GGGCAGATTAAGATCGATGCAACAAGCAGAACGGCTAATCCGCAGCGTTGGACGACATGCACGTACGATCGCCGGCAAGGTCCATGGACACCTCCCTCTCCATCGCCGTCGCAGCCGCCGCCGTCGTGCTGCTGCTCCTCGTGCGGGGCGCCGATGCCGAGATCAGGACGACGCTCATCGTGTCGGACGCTCGGCCTCTCATTCTGTTCGAGCAGTTTGGCTTCGAGCGTGGCGGGAAGGCGACCATCTCCATACGCCGCTCGTTTTGGAATCTCCGGCGGGGGTCACGGCGCACCGCGGTTGACCCCAGCCTCATGGGGTTCGTCCTCATCTCCGGAACCCAGTTCCCGAAGATCAACAACGCGTCCGCGTACGCGGCCGCCGACCCGGGGGACAACGGCGACGACGGCGGGGGCAGTTACTGCGTGCTGACGAGCGAGTACGCCCTCCCGGTGCTCCGGCTCGGCGACGTCCCGCCCGGCGGCGTCACCACCACCGTGAGCATCGACGACCCAGACCAGTACGCCGTCGTGTTCAGCAACTGCCAGGACGGCGTGGAGGTCACCGTCGACGTGTACACCGAGATGTACAACGTGCGGGACGGCATCTCCGACGGGCCCAGGGACTACCTACCCGTGGGCCTGCGGCCGCTGCCGACCATCTACACGGTCGTGTCGGAGGTGTACTTCGCGTTCCTGGCGCTGTGGGCGTGCGTGTGCGTGCGGCACCGCGCGACGGTGGAGCGGATCCACGCCGTCATGGGCGCGCTGCTGCTGTTCAAGGCGCTCAAGATGGCGTGCGCGGCGGAGGACTCGTGGTACGTGGAGCGCACCGGCACGCCGCACGGCTGGGACGTGGCGTTCTACGTCTTCGGCTTCTTCAAGGGCGTCCTGCTCTTCACCGTCATCATCCTCATCGGCACCGGCTGGTCCATCCTCAAGCCCTACCTCCAGGAGAGGGAGAAGAACATGCTTATGATCGTGATCCCGCTGCAAGTGGTCGAGAACCTGTTGCTGGTGGTGATCGGGGAGACGGGGCCGACGGGGCAGGACTGGGTCGTGTGGAACCAGGTGTTCCTGCTGGTGGACGTCATCTGCTGCTGCGCCGTGTTCTTCCCGATCATCTGGTCGATCCGCAGCATGCGCGAGGCATCCAAGACCGATGGCAAGGCGGCGCTCAACCTCCAGAAGCTCACGCTGTTCAAGCGCTTCTACCTCGTCGTCGTCGGCTACCTCTACTTCACCCGGATCATCGCGTCGGCGTTCCTCGCCTTGCTCAGCTACAAGTACCAGTGGGGCGTCAACGTGGCCATCGAGGCCGCCAGCCTCGCCTTCTACCTGTTCGTTTTCTACAACTTCCAGCCGGTGGCGAAGAACCCGTACTTGTACATTGGCGACACGGTGGAGGACGCGGCGGTCGAGCGTGAGATGGACGACGAAGGTCGATTTTGAGCGCCCTCGTGGATCGTCCATATGATTTTTCCCCCCAAGTTTTATGCGTTTCATTAGTTGGCTAGCTGCGTTAATTGTGTACGACTATATGTTTCGTGCTCGATCGGAGCGTCAGGCTCGCGGATTGGCGTGTGCCTGAAACGGTGATGATGTGACGACTGGTGTGTCTCTCCCTTTTGTACAAGAAGGCATGCTCAACGGATCGGGAAATTAGCA]


>consensus_1806#0 GGGCAGATTAAGATCGATGCAACAAGCAGAACGGCTAATCCGCAGCGTTGGACGACATGC ACGTACGATCGCCGGCAAGGTCCATGGACACCTCCCTCTCCATCGCCGTCGCAGCCGCCG CCGTCGTGCTGCTGCTCCTCGTGCGGGGCGCCGATGCCGAGATCAGGACGACGCTCATCG TGTCGGACGCTCGGCCTCTCATTCTGTTCGAGCAGTTTGGCTTCGAGCGTGGCGGGAAGG CGACCATCTCCATACGCCGCTCGTTTTGGAATCTCCGGCGGGGGTCACGGCGCACCGCGG TTGACCCCAGCCTCATGGGGTTCGTCCTCATCTCCGGAACCCAGTTCCCGAAGATCAACA ACGCGTCCGCGTACGCGGCCGCCGACCCGGGGGACAACGGCGACGACGGCGGGGGCAGTT ACTGCGTGCTGACGAGCGAGTACGCCCTCCCGGTGCTCCGGCTCGGCGACGTCCCGCCCG GCGGCGTCACCACCACCGTGAGCATCGACGACCCAGACCAGTACGCCGTCGTGTTCAGCA ACTGCCAGGACGGCGTGGAGGTCACCGTCGACGTGTACACCGAGATGTACAACGTGCGGG ACGGCATCTCCGACGGGCCCAGGGACTACCTACCCGTGGGCCTGCGGCCGCTGCCGACCA TCTACACGGTCGTGTCGGAGGTGTACTTCGCGTTCCTGGCGCTGTGGGCGTGCGTGTGCG TGCGGCACCGCGCGACGGTGGAGCGGATCCACGCCGTCATGGGCGCGCTGCTGCTGTTCA AGGCGCTCAAGATGGCGTGCGCGGCGGAGGACTCGTGGTACGTGGAGCGCACCGGCACGC CGCACGGCTGGGACGTGGCGTTCTACGTCTTCGGCTTCTTCAAGGGCGTCCTGCTCTTCA CCGTCATCATCCTCATCGGCACCGGCTGGTCCATCCTCAAGCCCTACCTCCAGGAGAGGG AGAAGAACATGCTTATGATCGTGATCCCGCTGCAAGTGGTCGAGAACCTGTTGCTGGTGG TGATCGGGGAGACGGGGCCGACGGGGCAGGACTGGGTCGTGTGGAACCAGGTGTTCCTGC TGGTGGACGTCATCTGCTGCTGCGCCGTGTTCTTCCCGATCATCTGGTCGATCCGCAGCA TGCGCGAGGCATCCAAGACCGATGGCAAGGCGGCGCTCAACCTCCAGAAGCTCACGCTGT TCAAGCGCTTCTACCTCGTCGTCGTCGGCTACCTCTACTTCACCCGGATCATCGCGTCGG CGTTCCTCGCCTTGCTCAGCTACAAGTACCAGTGGGGCGTCAACGTGGCCATCGAGGCCG CCAGCCTCGCCTTCTACCTGTTCGTTTTCTACAACTTCCAGCCGGTGGCGAAGAACCCGT ACTTGTACATTGGCGACACGGTGGAGGACGCGGCGGTCGAGCGTGAGATGGACGACGAAG GTCGATTTTGAGCGCCCTCGTGGATCGTCCATATGATTTTTCCCCCCAAGTTTTATGCGT TTCATTAGTTGGCTAGCTGCGTTAATTGTGTACGACTATATGTTTCGTGCTCGATCGGAG CGTCAGGCTCGCGGATTGGCGTGTGCCTGAAACGGTGATGATGTGACGACTGGTGTGTCT CTCCCTTTTGTACAAGAAGGCATGCTCAACGGATCGGGAAATTAGCA



consensusID : consensus_1806#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1608
fasta sequence
                              [GACCGATCGATCAAACGAATCATCCATGGCCGCCTCCGTCTCCCTCGCCGTAGCCGCCACCGCCGTCGTCGCGCTGCTGCTCGCGCTGCCCGTAGCGCTCGCCGAGATCAAGACGACGCCGATCGTCGCCGACTCGCGGCCGGTCATCCTGTTCGAGGAGTTCGGGTTCAAGCCTGGCGGCGTGTCGGCCGTGTCCGTCCGCGGGGTGTCATGGCGGGTGGCCGAGGGGTCGAAGCTCCAGGCCGCCGACCCTGGCCTAATGGGGTTCATCCTCATCTCAAACTCCCTCTTCTTTCAGATCAACAACGAGTCCGACTACGCCGAGGCCACCGGCGGCGCCTTCTGCCCGCTCACCAGCAAGTACGTGCTGCCGCTGTTCCGGCTCAAGGACATCGCCCCCGACGGCAACGGCAAGGGCTCCGTCACCATCGACGACGACGACCAGTACACGGTGCTGTTCAGCAGCTGCCAGGACGGCGTCGAGGTGACCATGGAGGTGCGCACCGAGATGTACAACGTGCGGCCCGGCGGCGGCCGCGGCGTCAGGGAGTACCTCCCCGTCGGGCTCCTCCCGCTGCCGGGCATCTTCGCGGCGGCGTCGGCGGTGTACTTCGTGTTCCTGGGCGCGTGGGCGTGGGCGTGCGCCAGGCACCGCGCGACGGCGGGGCAGATCCACGCGGTGATGGGGGCGCTGCTGCTGTTCAAGGCGCTGAAGCTGGCGTGCGCGGCGGAGGACGCGTGGTACGTGGAGCGCACGGGGACGCCGCACGGGTGGGACGTGGCGTTCTACGTGTTCGGCTCCTTCAAGGGCGTCCTGCTCTTCACCGTCATCGTGCTCATCGGCACCGGCTGGTCCTTCCTGAAGCCGTACCTCCAGGAGCGGGAGAAGAAGGTGCTGATGATCGTGATCCCGCTCCAGGTGGTGGAGAACATCGCGTCAGCGGTGATCGGGGAGACGGGGCCGGCGGGGAGGGACTGGCTGGCGTGGAACCAGATCTTCCTCCTCGTCGACGTCATCTGCTGCTGCGCCGTCTTCTTCCCCATCATCTGGTCCATCCGCAACCTGCGCGAGGCGTCCAAGACCGACGGCAAGGCGGCCAGGAACCTCAAGAAGCTCACCCTCTTCAAGCAGTTCTACCTCGTCGTCGTCGGCTACCTCTACTTCACGCGGATCGCCGTCTCGGCCTTCGCCGCCGTGCTCAGCTACAGGTACCAGTGGGTGGTCACCGTCGCCATGGAGGCGGCCAGCCTGGCCTTCTACATCTTCGTCTTCTACAACTTCAAGCCGGTGGAGAACAACCCGTACCTGTACGTCGGCGAAGACGAGGAGGAGGAGGCCAGCGGGCAGCTTGAGATGGAGGGCACTTTCGAGATATAAATCATGGACATAATATATATGACATGGCTGCCTAACCTCTGCACATGCCTCTCCAAGTTTTGTACGTAGATGATGGTGCACTGCGTCTTTCTGCACGCAGCTGTGTATAAATCACCATGCAAAAAAAAGGTAGCTCCTGCCTGCACAAAATGCGTTGGCACGCCCTTCAGCAATTCTGTGATTCCCCACGGGAAAATAACGAAGTATATAGCAAACGAAATGTGAAAATT]

[+] EMBL AK120762             [GACCGATCGATCAAACGAATCATCCATGGCCGCCTCCGTCTCCCTCGCCGTAGCCGCCACCGCCGTCGTCGCGCTGCTGCTCGCGCTGCCCGTAGCGCTCGCCGAGATCAAGACGACGCCGATCGTCGCCGACTCGCGGCCGGTCATCCTGTTCGAGGAGTTCGGGTTCAAGCCTGGCGGCGTGTCGGCCGTGTCCGTCCGCGGGGTGTCATGGCGGGTGGCCGAGGGGTCGAAGCTCCAGGCCGCCGACCCTGGCCTAATGGGGTTCATCCTCATCTCAAACTCCCTCTTCTTTCAGATCAACAACGAGTCCGACTACGCCGAGGCCACCGGCGGCGCCTTCTGCCCGCTCACCAGCAAGTACGTGCTGCCGCTGTTCCGGCTCAAGGACATCGCCCCCGACGGCAACGGCAAGGGCTCCGTCACCATCGACGACGACGACCAGTACACGGTGCTGTTCAGCAGCTGCCAGGACGGCGTCGAGGTGACCATGGAGGTGCGCACCGAGATGTACAACGTGCGGCCCGGCGGCGGCCGCGGCGTCAGGGAGTACCTCCCCGTCGGGCTCCTCCCGCTGCCGGGCATCTTCGCGGCGGCGTCGGCGGTGTACTTCGTGTTCCTGGGCGCGTGGGCGTGGGCGTGCGCCAGGCACCGCGCGACGGCGGGGCAGATCCACGCGGTGATGGGGGCGCTGCTGCTGTTCAAGGCGCTGAAGCTGGCGTGCGCGGCGGAGGACGCGTGGTACGTGGAGCGCACGGGGACGCCGCACGGGTGGGACGTGGCGTTCTACGTGTTCGGCTCCTTCAAGGGCGTCCTGCTCTTCACCGTCATCGTGCTCATCGGCACCGGCTGGTCCTTCCTGAAGCCGTACCTCCAGGAGCGGGAGAAGAAGGTGCTGATGATCGTGATCCCGCTCCAGGTGGTGGAGAACATCGCGTCAGCGGTGATCGGGGAGACGGGGCCGGCGGGGAGGGACTGGCTGGCGTGGAACCAGATCTTCCTCCTCGTCGACGTCATCTGCTGCTGCGCCGTCTTCTTCCCCATCATCTGGTCCATCCGCAACCTGCGCGAGGCGTCCAAGACCGACGGCAAGGCGGCCAGGAACCTCAAGAAGCTCACCCTCTTCAAGCAGTTCTACCTCGTCGTCGTCGGCTACCTCTACTTCACGCGGATCGCCGTCTCGGCCTTCGCCGCCGTGCTCAGCTACAGGTACCAGTGGGTGGTCACCGTCGCCATGGAGGCGGCCAGCCTGGCCTTCTACATCTTCGTCTTCTACAACTTCAAGCCGGTGGAGAACAACCCGTACCTGTACGTCGGCGAAGACGAGGAGGAGGAGGCCAGCGGGCAGCTTGAGATGGAGGGCACTTTCGAGATATAAATCATGGACATAATATATATGACATGGCTGCCTAACCTCTGCACATGCCTCTCCAAGTTTTGTACGTAGATGATGGTGCACTGCGTCTTTCTGCACGCAGCTGTGTATAAATCACCATGCAAAAAAAAGGTAGCTCCTGCCTGCACAAAATGCGTTGGCACGCCCTTCAGCAATTCTGTGATTCCCCACGGGAAAATAACGAAGTATATAGCAAACGAAATGTGAAAATT]


>consensus_1806#1 GACCGATCGATCAAACGAATCATCCATGGCCGCCTCCGTCTCCCTCGCCGTAGCCGCCAC CGCCGTCGTCGCGCTGCTGCTCGCGCTGCCCGTAGCGCTCGCCGAGATCAAGACGACGCC GATCGTCGCCGACTCGCGGCCGGTCATCCTGTTCGAGGAGTTCGGGTTCAAGCCTGGCGG CGTGTCGGCCGTGTCCGTCCGCGGGGTGTCATGGCGGGTGGCCGAGGGGTCGAAGCTCCA GGCCGCCGACCCTGGCCTAATGGGGTTCATCCTCATCTCAAACTCCCTCTTCTTTCAGAT CAACAACGAGTCCGACTACGCCGAGGCCACCGGCGGCGCCTTCTGCCCGCTCACCAGCAA GTACGTGCTGCCGCTGTTCCGGCTCAAGGACATCGCCCCCGACGGCAACGGCAAGGGCTC CGTCACCATCGACGACGACGACCAGTACACGGTGCTGTTCAGCAGCTGCCAGGACGGCGT CGAGGTGACCATGGAGGTGCGCACCGAGATGTACAACGTGCGGCCCGGCGGCGGCCGCGG CGTCAGGGAGTACCTCCCCGTCGGGCTCCTCCCGCTGCCGGGCATCTTCGCGGCGGCGTC GGCGGTGTACTTCGTGTTCCTGGGCGCGTGGGCGTGGGCGTGCGCCAGGCACCGCGCGAC GGCGGGGCAGATCCACGCGGTGATGGGGGCGCTGCTGCTGTTCAAGGCGCTGAAGCTGGC GTGCGCGGCGGAGGACGCGTGGTACGTGGAGCGCACGGGGACGCCGCACGGGTGGGACGT GGCGTTCTACGTGTTCGGCTCCTTCAAGGGCGTCCTGCTCTTCACCGTCATCGTGCTCAT CGGCACCGGCTGGTCCTTCCTGAAGCCGTACCTCCAGGAGCGGGAGAAGAAGGTGCTGAT GATCGTGATCCCGCTCCAGGTGGTGGAGAACATCGCGTCAGCGGTGATCGGGGAGACGGG GCCGGCGGGGAGGGACTGGCTGGCGTGGAACCAGATCTTCCTCCTCGTCGACGTCATCTG CTGCTGCGCCGTCTTCTTCCCCATCATCTGGTCCATCCGCAACCTGCGCGAGGCGTCCAA GACCGACGGCAAGGCGGCCAGGAACCTCAAGAAGCTCACCCTCTTCAAGCAGTTCTACCT CGTCGTCGTCGGCTACCTCTACTTCACGCGGATCGCCGTCTCGGCCTTCGCCGCCGTGCT CAGCTACAGGTACCAGTGGGTGGTCACCGTCGCCATGGAGGCGGCCAGCCTGGCCTTCTA CATCTTCGTCTTCTACAACTTCAAGCCGGTGGAGAACAACCCGTACCTGTACGTCGGCGA AGACGAGGAGGAGGAGGCCAGCGGGCAGCTTGAGATGGAGGGCACTTTCGAGATATAAAT CATGGACATAATATATATGACATGGCTGCCTAACCTCTGCACATGCCTCTCCAAGTTTTG TACGTAGATGATGGTGCACTGCGTCTTTCTGCACGCAGCTGTGTATAAATCACCATGCAA AAAAAAGGTAGCTCCTGCCTGCACAAAATGCGTTGGCACGCCCTTCAGCAATTCTGTGAT TCCCCACGGGAAAATAACGAAGTATATAGCAAACGAAATGTGAAAATT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_1806#0      GGGCAGATTAAGATCGATGCAACAAGCAGAACGGCTAATCCGCAGCGTTGGACGACATGC 60
consensus_1806#1      ----------------------------------------------------------GA 2
                                                                                * 

consensus_1806#0      ACGTACGATCGCCGGCAAGGTCCATGGACACCTCCCTCTCCATCGCCGTCGCAGCCGCCG 120
consensus_1806#1      CCGATCGATCAAACGAATCATCCATGGCCGCCTCCGTCTCCCTCGCCGTAGCCGCCACCG 62
                       **  *****    * *   ******* * ***** ***** ******* ** *** ***

consensus_1806#0      CCGTCGTGCTGCTGCTCCTCGTGCGGGGCGCCGA---TGCCGAGATCAGGACGACGCTCA 177
consensus_1806#1      CCGTCGTCGCGCTGCTGCTCGCGCTGCCCGTAGCGCTCGCCGAGATCAAGACGACGCCGA 122
                      *******   ****** **** ** *  **  *     ********** ********  *

consensus_1806#0      TCGTGTCGGACGCTCGGCCTCTCATTCTGTTCGAGCAGTTTGGCTTCGAGCGTGGCGGGA 237
consensus_1806#1      TCGTCGCCGACTCGCGGCCGGTCATCCTGTTCGAGGAGTTCGGGTTCAAGCCTGGCGGCG 182
                      ****  * *** * *****  **** ********* **** ** *** *** ******  

consensus_1806#0      AGGCGACCATCTCCATACGCCGCTCGTTTTGGAATCTCCGGCGGGGGTCACGGCGCACCG 297
consensus_1806#1      TGTCGGCCGTGTCCGTCCGCGGGGTGTCATGGCGGGTGGCCGAGGGGTCGAAGCTCCAGG 242
                       * ** ** * *** * *** *   **  ***    *      ******   ** *   *

consensus_1806#0      CGGTTGACCCCAGCCTCATGGGGTTCGTCCTCATCTCCGGAACCCAGTTCCCGAAGATCA 357
consensus_1806#1      CCGCCGACCCTGGCCTAATGGGGTTCATCCTCATCTCAAACTCCCTCTTCTTTCAGATCA 302
                      * *  *****  **** ********* **********     ***  ***    ******

consensus_1806#0      ACAACGCGTCCGCGTACGCGGCCGCCGACCCGGGGGACAACGGCGACGACGGCGGGGGCA 417
consensus_1806#1      ACAACGAGTCCGACTACGC------------------------CGAGGCCACCGGCGGCG 338
                      ****** *****  *****                        *** * *  *** *** 

consensus_1806#0      GTTACTGCGTGCTGACGAGCGAGTACGCCCTCCCGGTGCTCCGGCTCGGCGACGTCCCGC 477
consensus_1806#1      CCTTCTGCCCGCTCACCAGCAAGTACGTGCTGCCGCTGTTCCGGCTCAAGGACATCGCCC 398
                        * ****  *** ** *** ******  ** *** ** ********   *** ** * *

consensus_1806#0      CCGGCGGCGTCACCAC---CACCGTGAGCATCGACGACCCAGACCAGTACGCCGTCGTGT 534
consensus_1806#1      CCGACGGCAACGGCAAGGGCTCCGTCACCATCGACGACGACGACCAGTACACGGTGCTGT 458
                      *** ****  *  **    * **** * **********   ********* * **  ***

consensus_1806#0      TCAGCAACTGCCAGGACGGCGTGGAGGTCACCGTCGACGTGTACACCGAGATGTACAACG 594
consensus_1806#1      TCAGCAGCTGCCAGGACGGCGTCGAGGTGACCATGGAGGTGCGCACCGAGATGTACAACG 518
                      ****** *************** ***** *** * ** ***  *****************

consensus_1806#0      TGCGGGACGGCATCTCCGACGGGCCCAGGGACTACCTACCCGTGGGCCTGCGGCCGCTGC 654
consensus_1806#1      TGCGGCCCGGCGGCGGCCGCGGCGTCAGGGAGTACCTCCCCGTCGGGCTCCTCCCGCTGC 578
                      *****  ****  *  *  ***   ****** ***** ***** ** ** *  *******

consensus_1806#0      CGACCATCTACACGGTCGTGTCGGAGGTGTACTTCGCGTTCCTGGCGCTGTGGGCGTGCG 714
consensus_1806#1      CGGGCATCTTCGCGGCGGCGTCGGCGGTGTACTTCGTGTTCCTGGGCGCGTGGGCGTGGG 638
                      **  ***** * ***  * ***** *********** ********    ********* *

consensus_1806#0      TGTGCGTGCGGCACCGCGCGACGGTGGAGCGGATCCACGCCGTCATGGGCGCGCTGCTGC 774
consensus_1806#1      CGTGCGCCAGGCACCGCGCGACGGCGGGGCAGATCCACGCGGTGATGGGGGCGCTGCTGC 698
                       *****   *************** ** ** ********* ** ***** **********

consensus_1806#0      TGTTCAAGGCGCTCAAGATGGCGTGCGCGGCGGAGGACTCGTGGTACGTGGAGCGCACCG 834
consensus_1806#1      TGTTCAAGGCGCTGAAGCTGGCGTGCGCGGCGGAGGACGCGTGGTACGTGGAGCGCACGG 758
                      ************* *** ******************** ******************* *

consensus_1806#0      GCACGCCGCACGGCTGGGACGTGGCGTTCTACGTCTTCGGCTTCTTCAAGGGCGTCCTGC 894
consensus_1806#1      GGACGCCGCACGGGTGGGACGTGGCGTTCTACGTGTTCGGCTCCTTCAAGGGCGTCCTGC 818
                      * *********** ******************** ******* *****************

consensus_1806#0      TCTTCACCGTCATCATCCTCATCGGCACCGGCTGGTCCATCCTCAAGCCCTACCTCCAGG 954
consensus_1806#1      TCTTCACCGTCATCGTGCTCATCGGCACCGGCTGGTCCTTCCTGAAGCCGTACCTCCAGG 878
                      ************** * ********************* **** ***** **********

consensus_1806#0      AGAGGGAGAAGAACATGCTTATGATCGTGATCCCGCTGCAAGTGGTCGAGAACCTGTTGC 1014
consensus_1806#1      AGCGGGAGAAGAAGGTGCTGATGATCGTGATCCCGCTCCAGGTGGTGGAGAACATCGCGT 938
                      ** **********  **** ***************** ** ***** ****** *   * 

consensus_1806#0      TGGTGGTGATCGGGGAGACGGGGCCGACGGGGCAGGACTGGGTCGTGTGGAACCAGGTGT 1074
consensus_1806#1      CAGCGGTGATCGGGGAGACGGGGCCGGCGGGGAGGGACTGGCTGGCGTGGAACCAGATCT 998
                        * ********************** *****  ******* * * ********** * *

consensus_1806#0      TCCTGCTGGTGGACGTCATCTGCTGCTGCGCCGTGTTCTTCCCGATCATCTGGTCGATCC 1134
consensus_1806#1      TCCTCCTCGTCGACGTCATCTGCTGCTGCGCCGTCTTCTTCCCCATCATCTGGTCCATCC 1058
                      **** ** ** *********************** ******** *********** ****

consensus_1806#0      GCAGCATGCGCGAGGCATCCAAGACCGATGGCAAGGCGGCGCTCAACCTCCAGAAGCTCA 1194
consensus_1806#1      GCAACCTGCGCGAGGCGTCCAAGACCGACGGCAAGGCGGCCAGGAACCTCAAGAAGCTCA 1118
                      *** * ********** *********** ***********    ****** *********

consensus_1806#0      CGCTGTTCAAGCGCTTCTACCTCGTCGTCGTCGGCTACCTCTACTTCACCCGGATCATCG 1254
consensus_1806#1      CCCTCTTCAAGCAGTTCTACCTCGTCGTCGTCGGCTACCTCTACTTCACGCGGATCGCCG 1178
                      * ** *******  *********************************** ******  **

consensus_1806#0      CGTCGGCGTTCCTCGCCTTGCTCAGCTACAAGTACCAGTGGGGCGTCAACGTGGCCATCG 1314
consensus_1806#1      TCTCGGCCTTCGCCGCCGTGCTCAGCTACAGGTACCAGTGGGTGGTCACCGTCGCCATGG 1238
                        ***** ***  **** ************ ***********  **** *** ***** *

consensus_1806#0      AGGCCGCCAGCCTCGCCTTCTACCTGTTCGTTTTCTACAACTTCCAGCCGGTGGCGAAGA 1374
consensus_1806#1      AGGCGGCCAGCCTGGCCTTCTACATCTTCGTCTTCTACAACTTCAAGCCGGTGGAGAACA 1298
                      **** ******** ********* * ***** ************ ********* *** *

consensus_1806#0      ACCCGTACTTGTACATTGGCGACACGGTGGAGGACGCGGCGGTCGAGCGTGAGATGGACG 1434
consensus_1806#1      ACCCGTACCTGTACGTCGGCGAAGACGAGGAGGAGGAGGCCAGCGGGC---AGCTTGA-G 1354
                      ******** ***** * *****    * ****** * ***   ** **   ** * ** *

consensus_1806#0      ACGAAGGTCGATTTTGAGCGCCC--TCGTGGA--TCGTCCATATGATTTTTCCCCCCAAG 1490
consensus_1806#1      ATGGAGGGCACTTTCGAGATATAAATCATGGACATAATATATATGACATGGCTGCCTAAC 1414
                      * * *** *  *** ***       ** ****  *  *  ******  *  *  ** ** 

consensus_1806#0      TTTTATGCGTTTCATTAGTTGGCTAGCTGCGTTAATTGTGTACGACTATATGTTTC-GTG 1549
consensus_1806#1      CTCTGCACATGCCTCTC-CAAGTTTTGTACGTAGATGATGGTGCACTGCGTCTTTCTGCA 1473
                       * *   * *  *  *     * *   * ***  **  **    ***   * **** *  

consensus_1806#0      CTCGATCG------GAGCGTCAGGCTCGCGGAT--TGGCGTGTGCCTG---AAACGGTGA 1598
consensus_1806#1      CGCAGCTGTGTATAAATCACCATGCAAAAAAAAGGTAGCTCCTGCCTGCACAAAATGCGT 1533
                      * *    *       * *  ** **      *   * **   ******   ***  * * 

consensus_1806#0      TGATGTGACGACTGGTGTGTCT----CTCCCTTTTGTACAAGAAGGCATGCTCAACGGAT 1654
consensus_1806#1      TGGCACGCCCTTCAGCAATTCTGTGATTCCCCACGGGAAAATAACGAAGTATATAGCAAA 1593
                      **    * *     *    ***     ****    * * ** ** * *   *  *   * 

consensus_1806#0      CGGGAAATTAGCA-- 1667
consensus_1806#1      CGAAATGTGAAAATT 1608
                      **  *  * *  *  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)