cluster # 1842

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Oryza sativa
cluster # 1842 cluster # 1842 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1842#0 length = 1727 sequences # 2
consensusID : consensus_1842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1727
fasta sequence
                              [GCTGTTCGTCCACCGCGACGACATCTACGAGTGGGGCTCCGCCGCGCTGCTGCGCGCCGGCGGCGTGTTCCCGTACCGCGGCACGTGGGGCGGGGGCTCCTCCGGCGTCATAACCTCCGCGCCGGCCAACGTCGAGCACGTGCTCAGGGCCAACTTCGGCAACTACCCCAAGGGGCCCTACTACCGGGAGCGCTTCGTCGAGCTGCTCGGCGGCGGTATCTTCAACGCCGACGGCGAGGCGTGGCGCGCCCAGCGCCGGGCGGCCACCGCCGAGATGCACTCGTCGCGGTTCGTGGAGTTCTCGGTGAGGAGCATCGAGCAGCTGGTGTACGGCCGCCTCGTGCCGCTGGCCGAGCGGCTGAGTGGCGGCGGCGCCGCCGTCGACCTCCAGGAGGTGCTGCTCCGGTTCACGTTCGACAACATCTGCGCCGTGGCGTTCGGGGTGG-ACGCCGGGTGC-CTCGCCGACGGCCT-CCCCGACGTGCCGTTCGCGCGCGCGTTCGAGCTCGCCACGGAGCTCTCGCTCCTGCGGTTCGTCACCCCGCCCTTCATCTGGAAGGCCAAGCGGCTCCTCCGCGCCGGCAGCGAGCGGCGGCTCGTCG-AGGCCACGCGCGCCGTCCGCGAGTTCGCCGAGCGGGCGGTCGCCGACCG-CCGGAACGAGATGCGCAAGGTCGGGAGCCTGCGCGGCCGGTGCGACCTCCTGTCGCGGCTCATG-TCATCGGCGCCGGGCGCCGACT-ACTCCAACGAGTTCCTCCGCGACTTCTGCATCAGCTTCATCCTCGCGGGCCGCGACACGAGCTCCGTGGGGCTCGCCTGGTTCTTCTGGCTGCTCGCCGGCCACCCCGACGTCGAGTCCCGCGTCGTCGGCGACGTCCTCGCCGCGGGCGGCGACATCAAGAGGATGGACTACCTCCACGCGGCGCTCACGGAGGCGATGCGGCTGTACCCGCCGGTGCCCGTCGACTTCAAGGAGGCCCTCGCCGACGACGTGCTCCCGGACGGCACGCCGGTGCGAGCGCGGCAGCGCGTGATCTACTACACCTACGCGATCGGGCGCGACCCGGCGTCGTGGGGCGACGACGCGGCCGCGTTCCGGCCCGAGCGGTGGATGCGCGGCGGCGCGTTCGCCGGCGGCGAGAGCCCGTTCAAGTACGCGGTGTTCAACGCCGGCCCGAGGCTGTGCATCGGGAAGCGGTTCGCCTACACGCAGATGAAGACCGCGGCGGCGGCGGTGCTGTCCAGGTTCGCCGTCGAGGTGGTGCCCGGGCAGGAGGTGAAGCCGAAGCTGACCACGACGCTGTACATGAAGAACGGCCTCATGGTGCGCTTCAGGAGGAGGTCGCCGCCGCCACCGTCGCCGCCGCCGCGCCACGTCGTCGCCGACGACGACGACGACGACGACGTTGCAGCCGGTCGCCACGTTGCTGTCGGAAGCTGCAACAGTAACCATCTCTAACCAACCAAACAGTCTCTGTCGTTACTCCGCATTGCTAATTAACAAACTACTCACACACATTGCTTTCCCGCGCTAATTGTCATTAGAAAATCGTAATCTCGAGGACTGGACTGATCGCTGTACTGTGAAACAGCTCAAGAGTGAAGAGCAGCTGGTGCCGTCTCGCGCTGGACTACAGTGTGGCGGAAAAAGACGCGATCGATCAAATCATCAGACATTTCTGCTTACTACTCCGTATATTTTTCTTGCCTGTGTGACTGTGTATGTGTGTTCA]

[+] EMBL AK109775             [GCTGTTCGTCCACCGCGACGACATCTACGAGTGGGGCTCCGCCGCGCTGCTGCGCGCCGGCGGCGTGTTCCCGTACCGCGGCACGTGGGGCGGGGGCTCCTCCGGCGTCATAACCTCCGCGCCGGCCAACGTCGAGCACGTGCTCAGGGCCAACTTCGGCAACTACCCCAAGGGGCCCTACTACCGGGAGCGCTTCGTCGAGCTGCTCGGCGGCGGTATCTTCAACGCCGACGGCGAGGCGTGGCGCGCCCAGCGCCGGGCGGCCACCGCCGAGATGCACTCGTCGCGGTTCGTGGAGTTCTCGGTGAGGAGCATCGAGCAGCTGGTGTACGGCCGCCTCGTGCCGCTGGCCGAGCGGCTGAGTGGCGGCGGCGCCGCCGTCGACCTCCAGGAGGTGCTGCTCCGGTTCACGTTCGACAACATCTGCGCCGTGGCGTTCGGGGTGG ACGCCGGGTGC CTCGCCGACGGCCT CCCCGACGTGCCGTTCGCGCGCGCGTTCGAGCTCGCCACGGAGCTCTCGCTCCTGCGGTTCGTCACCCCGCCCTTCATCTGGAAGGCCAAGCGGCTCCTCCGCGCCGGCAGCGAGCGGCGGCTCGTCG AGGCCACGCGCGCCGTCCGCGAGTTCGCCGAGCGGGCGGTCGCCGACCG CCGGAACGAGATGCGCAAGGTCGGGAGCCTGCGCGGCCGGTGCGACCTCCTGTCGCGGCTCATG TCATCGGCGCCGGGCGCCGACT ACTCCAACGAGTTCCTCCGCGACTTCTGCATCAGCTTCATCCTCGCGGGCCGCGACACGAGCTCCGTGGGGCTCGCCTGGTTCTTCTGGCTGCTCGCCGGCCACCCCGACGTCGAGTCCCGCGTCGTCGGCGACGTCCTCGCCGCGGGCGGCGACATCAAGAGGATGGACTACCTCCACGCGGCGCTCACGGAGGCGATGCGGCTGTACCCGCCGGTGCCCGTCGACTTCAAGGAGGCCCTCGCCGACGACGTGCTCCCGGACGGCACGCCGGTGCGAGCGCGGCAGCGCGTGATCTACTACACCTACGCGATCGGGCGCGACCCGGCGTCGTGGGGCGACGACGCGGCCGCGTTCCGGCCCGAGCGGTGGATGCGCGGCGGCGCGTTCGCCGGCGGCGAGAGCCCGTTCAAGTACGCGGTGTTCAACGCCGGCCCGAGGCTGTGCATCGGGAAGCGGTTCGCCTACACGCAGATGAAGACCGCGGCGGCGGCGGTGCTGTCCAGGTTCGCCGTCGAGGTGGTGCCCGGGCAGGAGGTGAAGCCGAAGCTGACCACGACGCTGTACATGAAGAACGGCCTCATGGTGCGCTTCAGGAGGAGGTCGCCGCCGCCACCGTCGCCGCCGCCGCGCCACGTCGTCGCCGACGACGACGACGACGACGACGTTGCAGCCGGTCGCCACGTTGCTGTCGGAAGCTGCAACAGTAACCATCTCTAACCAACCAAACAGTCTCTGTCGTTACTCCGCATTGCTAATTAACAAACTACTCACACACATTGCTTTCCCGCGCTAATTGTCATTAGAAAATCGTAATCTCGAGGACTGGACTGATCGCTGTACTGTGAAACAGCTCAAGAGTGAAGAGCAGCTGGTGCCGTCTCGCGCTGGACTACAGTGTGGCGGAAAAAGACGCGATCGATCAAATCATCAGACATTTCTGCTTACTACTCCGTATATTTTTCTTGCCTGTGTGACTGTGTATGTGTGTTCA]
[+] EMBL C99701               [                                                                                                                                                                                                                                                                                                                                                                                                                                                   nTTCGTTCTGGAACCCCGGTTGCTTTCGCCAACGNCTTCCCCCAACTTGCCGTTCTCGCGCGCTTTCGAGNTCGCCAC GAG TCTCGNTCCTGCGGTTCGTCACCCCGCCNTTCATCTGGAAGGCCAAGCGGCTCCTCCGCGCCGGCAGCAAGCGGCGGCTCGTCGAAGGCCACGCGCGCCNTCCGCGAGTTCGCCGAGCGGGCGGTCGCCGACCGTCCGGAACGAGATGCGCAAGGTCGGGAGCNTGCGCGGCCGGTGCGACCTCCTGTCGCGGCTCATGTTCAT NGCGCCGGGCGCCGACTAANTCCAACGAGTTCCTCCGCGACTTCTGCATCAGCTTCATCCTCGCGGGCCGCGACACGAGCTCCGTGGGGCTCGCCTGGTTCTTCTGGCTGCTCGCCGGCCACCCCGACGTCGAGTCCCGCGTCGTCGGCGACGTCCT NCCGCGGGCGGCGACATCAAGAGGATGGACTACCTCCACGCGGCGCTCACGGAGGCGATGCGGCTGTACCCG CGGTGCCCGTCGACTTCAAGGAGGCCCTCGCCGACGACGTGCTCCCGGACGGCACGCCGGTGCGAGCGCGGCAGCGCGTGATCTACTACACNTACGCGATCGGGCGCGACCCGGCGTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_1842#0
GCTGTTCGTCCACCGCGACGACATCTACGAGTGGGGCTCCGCCGCGCTGCTGCGCGCCGG
CGGCGTGTTCCCGTACCGCGGCACGTGGGGCGGGGGCTCCTCCGGCGTCATAACCTCCGC
GCCGGCCAACGTCGAGCACGTGCTCAGGGCCAACTTCGGCAACTACCCCAAGGGGCCCTA
CTACCGGGAGCGCTTCGTCGAGCTGCTCGGCGGCGGTATCTTCAACGCCGACGGCGAGGC
GTGGCGCGCCCAGCGCCGGGCGGCCACCGCCGAGATGCACTCGTCGCGGTTCGTGGAGTT
CTCGGTGAGGAGCATCGAGCAGCTGGTGTACGGCCGCCTCGTGCCGCTGGCCGAGCGGCT
GAGTGGCGGCGGCGCCGCCGTCGACCTCCAGGAGGTGCTGCTCCGGTTCACGTTCGACAA
CATCTGCGCCGTGGCGTTCGGGGTGGACGCCGGGTGCCTCGCCGACGGCCTCCCCGACGT
GCCGTTCGCGCGCGCGTTCGAGCTCGCCACGGAGCTCTCGCTCCTGCGGTTCGTCACCCC
GCCCTTCATCTGGAAGGCCAAGCGGCTCCTCCGCGCCGGCAGCGAGCGGCGGCTCGTCGA
GGCCACGCGCGCCGTCCGCGAGTTCGCCGAGCGGGCGGTCGCCGACCGCCGGAACGAGAT
GCGCAAGGTCGGGAGCCTGCGCGGCCGGTGCGACCTCCTGTCGCGGCTCATGTCATCGGC
GCCGGGCGCCGACTACTCCAACGAGTTCCTCCGCGACTTCTGCATCAGCTTCATCCTCGC
GGGCCGCGACACGAGCTCCGTGGGGCTCGCCTGGTTCTTCTGGCTGCTCGCCGGCCACCC
CGACGTCGAGTCCCGCGTCGTCGGCGACGTCCTCGCCGCGGGCGGCGACATCAAGAGGAT
GGACTACCTCCACGCGGCGCTCACGGAGGCGATGCGGCTGTACCCGCCGGTGCCCGTCGA
CTTCAAGGAGGCCCTCGCCGACGACGTGCTCCCGGACGGCACGCCGGTGCGAGCGCGGCA
GCGCGTGATCTACTACACCTACGCGATCGGGCGCGACCCGGCGTCGTGGGGCGACGACGC
GGCCGCGTTCCGGCCCGAGCGGTGGATGCGCGGCGGCGCGTTCGCCGGCGGCGAGAGCCC
GTTCAAGTACGCGGTGTTCAACGCCGGCCCGAGGCTGTGCATCGGGAAGCGGTTCGCCTA
CACGCAGATGAAGACCGCGGCGGCGGCGGTGCTGTCCAGGTTCGCCGTCGAGGTGGTGCC
CGGGCAGGAGGTGAAGCCGAAGCTGACCACGACGCTGTACATGAAGAACGGCCTCATGGT
GCGCTTCAGGAGGAGGTCGCCGCCGCCACCGTCGCCGCCGCCGCGCCACGTCGTCGCCGA
CGACGACGACGACGACGACGTTGCAGCCGGTCGCCACGTTGCTGTCGGAAGCTGCAACAG
TAACCATCTCTAACCAACCAAACAGTCTCTGTCGTTACTCCGCATTGCTAATTAACAAAC
TACTCACACACATTGCTTTCCCGCGCTAATTGTCATTAGAAAATCGTAATCTCGAGGACT
GGACTGATCGCTGTACTGTGAAACAGCTCAAGAGTGAAGAGCAGCTGGTGCCGTCTCGCG
CTGGACTACAGTGTGGCGGAAAAAGACGCGATCGATCAAATCATCAGACATTTCTGCTTA
CTACTCCGTATATTTTTCTTGCCTGTGTGACTGTGTATGTGTGTTCA
clustalw multiple alignements is not computed in this case