cluster # 1856

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Oryza sativa
cluster # 1856 cluster # 1856 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1856#0 length = 883 sequences # 2

consensusID : consensus_1856#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 883
fasta sequence

                              [GATAAGTTGGTTGTTCGTTCTGTTCGAAATGCAGATTCTGCTGTGCCAACAGCCTCTGTTGAGGATGCAATTGTGCAAATTGAAGATACACTCTATTATTTCAGTGACGTTATGTCTTCTGGGATTCCTGATCTTGGAAGATTCATCACTGAAAATATCTTGCAACTTTTGGTGTTTCGGTTCTTACTCCCATCGTTGCAAAGGCAGAGCACTGATTTGGGTATAAGTGTCACTACTTCCATGTACTTGATTTGCTGTATACTTCACATTTTTAAGAACAAAGATATGGCAAGCACTGTTGCTGCTGCCCTTTTCCATCAACCTGATTGCCATGATAGGAAGCAAGGAACTCCAAACGGTTATACCTCTGAGCATGAGAATGGCATATCTGACAATCAAGGCACTATCACCTCATATATAGACCAGTCAAATGAAGACAAATCGGATATCTTGTCTTCATCAAACACGCATTGCTCGCCTGATGATCCATCATCAAGTGATTGTTGCCAAAGCAATACGCTTAAGGAACATTTGCCTG-CTTATATAATAAGTGGGGATGACTTCCAAGCTTTAGGTTCTTTGTGCTTATTTTCTACATTGTTGCAGACAAAAGAACTTGATGAATCAATGCTAGATGCACTTGGAATTCTGCCTCAAAGAAAGCAGCATAAGANGCTTCTATTACAAGCTTTGGTAGGAGAAGATCTAGCTGAAAGGCAATTATTTTCATCCAGTAGCGGTCTAGCAGATGACAGCATCTGCAGTGATTTTGATATGTATGTAAGGAAGCTTCAGGATAAATACGGGTTTAAAGTGTCATCATCCACGGCAAATGACCTCTAAATTCCACAGGTATCAGGTGCTCGATGCATTAGGTTGCCCT]

[+] EMBL CB640548             [GATAAGTTGGTTGTTCGTTCTGTTCGAAATGCAGATTCTGCTGTGCCAACAGCCTCTGTTGAGGATGCAATTGTGCAAATTGAAGATACACTCTATTATTTCAGTGACGTTATGTCTTCTGGGATTCCTGATCTTGGAAGATTCATCACTGAAAATATCTTGCAACTTTTGGTGTTTCGGTTCTTACTCCCATCGTTGCAAAGGCAGAGCACTGATTTGGGTATAAGTGTCACTACTTCCATGTACTTGATTTGCTGTATACTTCACATTTTTAAGAACAAAGATATGGCAAGCACTGTTGCTGCTGCCCTTTTCCATCAACCTGATTGCCATGATAGGAAGCAAGGAACTCCAAACGGTTATACCTCTGAGCATGAGAATGGCATATCTGACAATCAAGGCACTATCACCTCATATATAGACCAGTCAAATGAAGACAAATCGGATATCTTGTCTTCATCAAACACGCATTGCTCGCCTGATGATCCATCATCAAGTGATTGTTGCCAAAGCAATACGCTTAAGGAACATTTGCCTG                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C72078               [                                                                                                                                                                                                                                                                                                                                                                                                                                                            GATATCTTGTCTTCATCAAACACGCATTGCTTGCCTGATGATCCATCATCAAGTGATTNTTGCCAAGGCAATACGCTTAGGGAACATTTG CTGTCTTATATAATAAGTGGGGATGACTTCCAAGCTTTAGGTTCTTTGTGCTTATTTTCTACATTGTTGCAGACAAAAGAACTTGATGAATCAATGCTAGATGCACTTGGAATTCTGCCTCAAAGAAAGCAGCATAAGANGCTTCTATTACAAGCTTTGGTAGGAGAAGATCTAGCTGAAAGGCAATTATTTTCATCCAGTAGCGGTCTAGCAGATGACAGCATCTGCAGTGATTTTGATATGTATGTAAGGAAGCTTCAGGATAAATACGGGTTTAAAGTGTCATCATCCACGGCAAATGACCTCTAAATTCCACAGGTATCAGGTGCTCGATGCATTAGGTTGCCCT]




>consensus_1856#0
GATAAGTTGGTTGTTCGTTCTGTTCGAAATGCAGATTCTGCTGTGCCAACAGCCTCTGTT
GAGGATGCAATTGTGCAAATTGAAGATACACTCTATTATTTCAGTGACGTTATGTCTTCT
GGGATTCCTGATCTTGGAAGATTCATCACTGAAAATATCTTGCAACTTTTGGTGTTTCGG
TTCTTACTCCCATCGTTGCAAAGGCAGAGCACTGATTTGGGTATAAGTGTCACTACTTCC
ATGTACTTGATTTGCTGTATACTTCACATTTTTAAGAACAAAGATATGGCAAGCACTGTT
GCTGCTGCCCTTTTCCATCAACCTGATTGCCATGATAGGAAGCAAGGAACTCCAAACGGT
TATACCTCTGAGCATGAGAATGGCATATCTGACAATCAAGGCACTATCACCTCATATATA
GACCAGTCAAATGAAGACAAATCGGATATCTTGTCTTCATCAAACACGCATTGCTCGCCT
GATGATCCATCATCAAGTGATTGTTGCCAAAGCAATACGCTTAAGGAACATTTGCCTGCT
TATATAATAAGTGGGGATGACTTCCAAGCTTTAGGTTCTTTGTGCTTATTTTCTACATTG
TTGCAGACAAAAGAACTTGATGAATCAATGCTAGATGCACTTGGAATTCTGCCTCAAAGA
AAGCAGCATAAGANGCTTCTATTACAAGCTTTGGTAGGAGAAGATCTAGCTGAAAGGCAA
TTATTTTCATCCAGTAGCGGTCTAGCAGATGACAGCATCTGCAGTGATTTTGATATGTAT
GTAAGGAAGCTTCAGGATAAATACGGGTTTAAAGTGTCATCATCCACGGCAAATGACCTC
TAAATTCCACAGGTATCAGGTGCTCGATGCATTAGGTTGCCCT

clustalw multiple alignements is not computed in this case