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Oryza sativa
cluster # 1860 cluster # 1860       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1860#0 length = 1317 sequences # 2  
consensusID : consensus_1860#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1317
fasta sequence 
                              [CAAATCACAGCAATGCATGATTCGCAAAAAAGCCTCCCCACACTGCCTACATGACGTCAGCGGTTCTTGCCCTCACCTCTCGATTCTTCTCCACTCGAGCAGAAGACCGGAATCAGCTCCCGTACCCTGTTTGTTACCCATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCCCACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAACATGTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCCACCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAGCAGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTCTGCCAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACACCAATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAGGAATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTCCGAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCATTTGGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTACGGAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGATGAGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGTTGGGACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGCGTTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATTCCTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCACTGGAGGATACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATATGGTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTGAACAAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTACCCTTTTCTCAGTCCTCTGTGAGTATTGCATTTGTTTTAATTAAGCGAGAAATTGCAATCCATTCCTCAGAGCTCTTGACTTGGAATCACAATAAAATTAAA]

[+] EMBL AK069898             [CAAATCACAGCAATGCATGATTCGCAAAAAAGCCTCCCCACACTGCCTACATGACGTCAGCGGTTCTTGCCCTCACCTCTCGATTCTTCTCCACTCGAGCAGAAGACCGGAATCAGCTCCCGTACCCTGTTTGTTACCCATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCCCACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAACATGTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCCACCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAGCAGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTCTGCCAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACACCAATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAGGAATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTCCGAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCATTTGGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTACGGAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGATGAGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGTTGGGACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGCGTTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATTCCTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCACTGGAGGATACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATATGGTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTGAACAAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTACCCTTTTCTCAGTCCTCTGTGAGTATTGCATTTGTTTTAATTAAGCGAGAAATTGCAATCCATTCCTCAGAGCTCTTGACTTGGAATCACAATAAAATTA  ]
[+] EMBL AK059887             [                                                                                      TTCTCCACTCGAGCAGAAGACCGGAATCAGCTCCCGTACCCTGTTTGTTACCCATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGGGAGATTCCACCTCGCCCACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAATAATCTTCCTCAAGAACATGTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCTTCTGATCGCTGAAGCCACCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGGTATATGGACAAAGGAGCAGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAAGGGTGGTGTTTTCTTCTGCCAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCAGCCCAATGGACAAACACCAATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAAAGATGGAACTGTCGAGGAATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCAAATTGTTGATGATTTCCGAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGTTGAAATCCACTGCGCATTTGGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGACAGAACTGACAAGTACGGAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAATCCAAGCAGCCATCGATGAGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTCAAACTGCCTGGACTGTTGGGACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGCCATGAGCAAGCTGGGCGTTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGACGGCAAGGTGCAGATTCCTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTTCATCGTCGCTGGAGGATACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACACAGACCTGGTAGCATATGGTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGAGCTGAATGCGCCTCTGAACAAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTATCGGGTACACCGATTACCCTTTTCTCAGTCCTCTGTGAGTATTGCATTTGTTTTAATTAAGCGAGAAATTGCAATCCATTCCTCAGAGCTCTTGACTTGGAATCACAATAAAATTAAA]




>consensus_1860#0
CAAATCACAGCAATGCATGATTCGCAAAAAAGCCTCCCCACACTGCCTACATGACGTCAG
CGGTTCTTGCCCTCACCTCTCGATTCTTCTCCACTCGAGCAGAAGACCGGAATCAGCTCC
CGTACCCTGTTTGTTACCCATGGAAGCGAAAATTCCCCTCCTTACTCCTCACACCATGGG
GAGATTCCACCTCGCCCACAGGGTTGTCCATGCGCCGCTGACCAGATCGAGGTGCTACAA
TAATCTTCCTCAAGAACATGTTCAGCTGTACTACTCGCAGAGGGCCACAAATGGCGGCCT
TCTGATCGCTGAAGCCACCGGGGTCTCGGAGACTGCTCAAGGGTATCCAAACACACCGGG
TATATGGACAAAGGAGCAGGTGGAAGCTTGGAGGACGGTTGTGGATGCAGTGCATCAGAA
GGGTGGTGTTTTCTTCTGCCAAATCTGGCATGTAGGGAGGGCATCTACCAATGATTATCA
GCCCAATGGACAAACACCAATTCCTTGTACAGACAAGAAAATCACTCCTACAGTTCTCAA
AGATGGAACTGTCGAGGAATTCTCTGCCCCAAGGAGGCTAAGAGAAGATGAGATCCCCCA
AATTGTTGATGATTTCCGAATTGCTGCTAGGAATTGCATTGAAGCAGGCTTTGACGGAGT
TGAAATCCACTGCGCATTTGGGTACCTAATTGAACAGTTCATGAAAGATGGTGTCAACGA
CAGAACTGACAAGTACGGAGGAAGCATCGCAAACCGTTGCCGCTTTGCTCTAGAGGTAAT
CCAAGCAGCCATCGATGAGATCGGATCGGACAGAGTAGGTGTCCGTCTCTCGCCATACTC
AAACTGCCTGGACTGTTGGGACTCAGACCCAGATGCACTTGGCCTCTACATGATCCAAGC
CATGAGCAAGCTGGGCGTTCTCTACTGCAGCATGGTTGAGCCTGAGGTGGTCAAAGTAGA
CGGCAAGGTGCAGATTCCTTACAAGCTATGGCACTTCAGGAAAGTGTTTGCTGGCACTTT
CATCGTCACTGGAGGATACAACAGAGAAGAAGGCAATAGAGCAGTGTCTCAGGGTTACAC
AGACCTGGTAGCATATGGTAAATGGTTCTTGGCAAACCCGGATCTGCCTAGGCGGTTTGA
GCTGAATGCGCCTCTGAACAAGTATGACAGATCGACGTTCTACACTTCTGATCCAGTTAT
CGGGTACACCGATTACCCTTTTCTCAGTCCTCTGTGAGTATTGCATTTGTTTTAATTAAG
CGAGAAATTGCAATCCATTCCTCAGAGCTCTTGACTTGGAATCACAATAAAATTAAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)