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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1871 cluster # 1871       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1871#0 length = 566 sequences # 2  

consensusID : consensus_1871#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 566
fasta sequence
                              [TTTTGGCGGCCAAAACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTCAGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACGCACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTGTTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACGGTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACCACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTCAGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCCTCCACAACCACATCGTCGGCCAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATTGAATCCATTCTTCTTCAGGAGATCAGAGCGACAACCTGATTGAAGTTTTGGAGAATATGAACACTGAGCACCTGGCCCCCCTTGTC]

[+] EMBL CA761600             [TTTTGGCGGCCAAAACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTCAGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACGCACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTGTTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACGGTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACCACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTCAGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCCTCCACAACCACATCGTCGGCCAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATTGAATCCATTCTTCTTCAGGAGATCAGAGCGACAACCTGATTGAAGTTTTGGAGAATATGAACACTGAGCACCTGGCCCCCCTTGTC]
[-] EMBL AK107933             [             AACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTCAGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACGCACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTGTTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACGGTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACCACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTCAGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCCTCCACAACCACATCGTCGGCGAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATTGAATCCATTCTTCTTCAGGAGATCAGAGGGACAACCTGATTGAAGTTTTGGAGAAGATGAACACTGA                   ]


>consensus_1871#0 TTTTGGCGGCCAAAACAAGCAAACATGGTTTAACTTCTCTAAAGGAAACGGCTGGTGTTC AGCACACTAGACACGATTATTCTCAGGCACAGAGCGGGTAGAGGAGCTGGACGGCGCACG CACCGCAGGAGCAGGTAGGCTTCTCGACCCGACCGGCCGCGAGTCGATCTCGGTCAGTTG TTCGGAGGACGGGGTGCGGTCTTGGGCTCGCCGTCGCCGGCCTTGGGAGGGACGCTCACG GTCACGGCCTGATTGGTAGTAGGAGGAGTAGTAGCATTGCCCACCACAGGGCTCTGAACC ACCTGCCCTATTAAACCCTGGGTGAAAATCCTGAAAGCCTCTTCAGGGGAGTTGTTTCTC AGTATCTCCAGAGCCTCCCTCCTTGCACGGTCCATCTCCTCGCTGGAGAGAGTAGGCGCC TCCACAACCACATCGTCGGCCAGGTTAATCAAGTCATCAAAGGAGTCCTGCCTCTGGATT GAATCCATTCTTCTTCAGGAGATCAGAGCGACAACCTGATTGAAGTTTTGGAGAATATGA ACACTGAGCACCTGGCCCCCCTTGTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)