cluster # 188

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Oryza sativa
cluster # 188 cluster # 188 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_188#0 length = 2347 sequences # 2
consensusID : consensus_188#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2347
fasta sequence
                              [GTGGTGATGCCGGAGAGGTACGCGCTGGGTGGCGCGTGCAGGGTGCTCGCCGGAATGCCCGCGCCGCTCGGGGCCACCGCGCTCGACGGCGGGGTCAATTTCGCCGTCTACTCCGCCGGCGCATCCGCCGCGTCGCTCTGCCTCTTCACCCCCGACGATCTCGAGGCGGATGAGGTGACTGAGGAGGTTCCGCTTGATCCTCTGTTCAATCGGACGGGGAATGTGTGGCACGTCTTCATCGAAGGCGAGCTGCACAACATGCTGTACGGGTACAGGTTCGATGGTATGTTCGCCCCTCACTGCGGCCAGTACTTCGATGTCTCCAATGTCGTGGTGGATCCTTATGCCAAGGCAGTGATAAGCCGAGGAGAGTATGGTGTCCCCGGTCCTGGTGGCGATTGCTGGCCTCAAATGGCTGGCATGATCCCTCTTCCGTACAGTACGTTTGATTGGCAAGGTGACCTACCTCTGAGATATCCTCAGAAGGATCTTGTAATCTATGAGATGCATTTACGTGGGTTTACAAAGCACAGTTCAAGCAATGTAGAACATCCAGGGACTTACATTGGGGCTATATCAAAGCTTGACTATCTGAAGGAGCTTGGAGTTAACTGTGTAGAGTTGATGCCCTGCCATGAATTCAATGAGCTGGAGTACTTCAGCTGCTCTTCCAAGATGAACTTCTGGGGATACTCCACGATAAACTTTTTTTCACCAATGATAAGATATTCATCAGGTGGGATAAGAAACTGTGGCCGTGATGCCATAAATGAATTCAAAACTTTTGTTAGAGAGGCTCACAAACGGGGAATTGAGGTGATCATGGATGTTGTCTTCAATCATACAGCCGAGGGTAATGAGAAAGGACCAATATTATCATTTAGGGGGATAGATAATAGCACATACTATATGCTTGCCCCTAAGGGAGAGTTTTACAATTATTCTGGTTGTGGGAATACCTTCAACTGTAATCATCCTGTGGTCCGTGAATTTATTGTAGATTGTTTAAGATACTGGGTGACAGAAATGCATGTTGATGGTTTTCGTTTTGATCTTGCATCCATAATGACCAGAGGATGCAGTCTTTGGGATCCAGTTAATGTGTATGGAAGTCCAGTAGAAGGTGACATGACTACGACAGGGACACCTCTTGCTACTCCACCACTTATTGACATGATCAGCAATGATCCAATTCTTGGAGATGTCAAGCTCATTGCTGAAGCATGGGATGCGGGAGGCCTCTATCAAGTAGGTCAATTTCCTCACTGGAAAATTTGGTCAGAATGGAATGGAAAGTACCGGGACATTGTTCGTCAATTCATTAAAGGCACAGATGGATTTGCTGGTGGTTTCGCTGAATGTTTGTGTGGAAGTCCACATCTATACCAGGCAGGGGGGAGGAAACCTTGGCACAGTATCAACTTTGTGTGTGCGCATGATGGATTTACGCTGGCTGATTTGGTGACATATAACAAGAAGTACAACTCTTCAAATGGTGAGGATAATAGAGATGGAGAAAATCATAACCTCAGCTGGAACTGTGGGGAGGAAGGAGAATTTGCAGGTTTGTCGGTCAAAAGATTGAGGAAGAGGCAAATGCGCAATTTCTTTGTTTCTCTCATGGTTTCTCAAGGTGTTCCGATGTTCTACATGGGCGATGAATATGGCCATACAAAAGGAGGCAACAACAACACATACTGCCATGACCATTATGTCAATTATTTCCGCTGGGACAAGAAAGAAGAATCCTCTGACTTGCAACGGTTCTGCTCTCTTATGACCAAATTCCGCAAACAATGCGAGTCCCTTGGCCTCGCAGACTTCCCAACAGCTCAACGGTTGCATTGGCATGGCCATCAGCCTGGGAAACCTGACTGGTCTGAGACAAGCCGTTTCGTGGCCTTCTCCACGAAAGATGAAACGAAAGGCGAGATCTACGTGGCCTTCAACGCCAGCCATTTGCCGGCGGTTGTTGGACTCCCAGAGCGCCCAGGCTACCGCTGGGAGCCGCTGGTGGACACAGGCAAGCCAGCGCCTTATGACTTCCTCACCGACGACCTGCCTGATCGTGTCACGCCGTCCACCTGTTCTCTCATTTCCTCAACTCCAATCTCTACCCCATGCTCAGCTACTCCTCCATCATCCTTGAATTGCAGCCTGATGATTGAAAGAACAAAGTATAGCATAGTATAGCAGAGTAAAAAACATATGTTTATAGCCCTTTTTGCGTATATGTTGAAGTTGTGCGGTCCTTCAATTTTGAAAAAAAGNGTAATCTGTATATTCATGCATCTCCTGAGCGNNNAGATAAGCTCCTCCGGGACGAGCTAGCAGNAAAAGCATTCTC]

[+] EMBL AB015615             [GTGGTGATGCCGGAGAGGTACGCGCTGGGTGGCGCGTGCAGGGTGCTCGCCGGAATGCCCGCGCCGCTCGGGGCCACCGCGCTCGACGGCGGGGTCAATTTCGCCGTCTACTCCGCCGGCGCATCCGCCGCGTCGCTCTGCCTCTTCACCCCCGACGATCTCGAGGCGGATGAGGTGACTGAGGAGGTTCCGCTTGATCCTCTGTTCAATCGGACGGGGAATGTGTGGCACGTCTTCATCGAAGGCGAGCTGCACAACATGCTGTACGGGTACAGGTTCGATGGTATGTTCGCCCCTCACTGCGGCCAGTACTTCGATGTCTCCAATGTCGTGGTGGATCCTTATGCCAAGGCAGTGATAAGCCGAGGAGAGTATGGTGTCCCCGGTCCTGGTGGCGATTGCTGGCCTCAAATGGCTGGCATGATCCCTCTTCCGTACAGTACGTTTGATTGGCAAGGTGACCTACCTCTGAGATATCCTCAGAAGGATCTTGTAATCTATGAGATGCATTTACGTGGGTTTACAAAGCACAGTTCAAGCAATGTAGAACATCCAGGGACTTACATTGGGGCTATATCAAAGCTTGACTATCTGAAGGAGCTTGGAGTTAACTGTGTAGAGTTGATGCCCTGCCATGAATTCAATGAGCTGGAGTACTTCAGCTGCTCTTCCAAGATGAACTTCTGGGGATACTCCACGATAAACTTTTTTTCACCAATGATAAGATATTCATCAGGTGGGATAAGAAACTGTGGCCGTGATGCCATAAATGAATTCAAAACTTTTGTTAGAGAGGCTCACAAACGGGGAATTGAGGTGATCATGGATGTTGTCTTCAATCATACAGCCGAGGGTAATGAGAAAGGACCAATATTATCATTTAGGGGGATAGATAATAGCACATACTATATGCTTGCCCCTAAGGGAGAGTTTTACAATTATTCTGGTTGTGGGAATACCTTCAACTGTAATCATCCTGTGGTCCGTGAATTTATTGTAGATTGTTTAAGATACTGGGTGACAGAAATGCATGTTGATGGTTTTCGTTTTGATCTTGCATCCATAATGACCAGAGGATGCAGTCTTTGGGATCCAGTTAATGTGTATGGAAGTCCAGTAGAAGGTGACATGACTACGACAGGGACACCTCTTGCTACTCCACCACTTATTGACATGATCAGCAATGATCCAATTCTTGGAGATGTCAAGCTCATTGCTGAAGCATGGGATGCGGGAGGCCTCTATCAAGTAGGTCAATTTCCTCACTGGAAAATTTGGTCAGAATGGAATGGAAAGTACCGGGACATTGTTCGTCAATTCATTAAAGGCACAGATGGATTTGCTGGTGGTTTCGCTGAATGTTTGTGTGGAAGTCCACATCTATACCAGGCAGGGGGGAGGAAACCTTGGCACAGTATCAACTTTGTGTGTGCGCATGATGGATTTACGCTGGCTGATTTGGTGACATATAACAAGAAGTACAACTCTTCAAATGGTGAGGATAATAGAGATGGAGAAAATCATAACCTCAGCTGGAACTGTGGGGAGGAAGGAGAATTTGCAGGTTTGTCGGTCAAAAGATTGAGGAAGAGGCAAATGCGCAATTTCTTTGTTTCTCTCATGGTTTCTCAAGGTGTTCCGATGTTCTACATGGGCGATGAATATGGCCATACAAAAGGAGGCAACAACAACACATACTGCCATGACCATTATGTCAATTATTTCCGCTGGGACAAGAAAGAAGAATCCTCTGACTTGCAACGGTTCTGCTCTCTTATGACCAAATTCCGCAAACAATGCGAGTCCCTTGGCCTCGCAGACTTCCCAACAGCTCAACGGTTGCATTGGCATGGCCATCAGCCTGGGAAACCTGACTGGTCTGAGACAAGCCGTTTCGTGGCCTTCTCCACGAAAGATGAAACGAAAGGCGAGATCTACGTGGCCTTCAACGCCAGCCATTTGCCGGCGGTTGTTGGACTCCCAGAGCGCCCAGGCTACCGCTGGGAGCCGCTGGTGGACACAGGCAAGCCAGCGCCTTATGACTTCCTCACCGACGACCTGCCTGATCGTGTCACGCCGTCCACCTGTTCTCTCATTTCCTCAACTCCAATCTCTACCCCATGCTCAGCTACTCCTCCATCATCCTTGAATTGCAGCCTGATGATTGAAAGAACAAAGTATAGCATAGTATAGCAGAGTAAAAAACATATGTTTATAGCCCTTTTTGCGTATATGTTGAAGTTGTGCGGTCCTTCAATTTTGAAAAAAA                                                                              ]
[-] EMBL AA750369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cggnacgagGTTTATAGCCCTTTTTGCGTATA GTTGAAGTTGTGCGGTCCTTCAATTTTGATGGATGGNGTAATCTGTATATTCATGCATCTCCTGAGCGNNNAGATAAGCTCCTCCGGGACGAGCTAGCAGNAAAAGCATTCTC]




>consensus_188#0
GTGGTGATGCCGGAGAGGTACGCGCTGGGTGGCGCGTGCAGGGTGCTCGCCGGAATGCCC
GCGCCGCTCGGGGCCACCGCGCTCGACGGCGGGGTCAATTTCGCCGTCTACTCCGCCGGC
GCATCCGCCGCGTCGCTCTGCCTCTTCACCCCCGACGATCTCGAGGCGGATGAGGTGACT
GAGGAGGTTCCGCTTGATCCTCTGTTCAATCGGACGGGGAATGTGTGGCACGTCTTCATC
GAAGGCGAGCTGCACAACATGCTGTACGGGTACAGGTTCGATGGTATGTTCGCCCCTCAC
TGCGGCCAGTACTTCGATGTCTCCAATGTCGTGGTGGATCCTTATGCCAAGGCAGTGATA
AGCCGAGGAGAGTATGGTGTCCCCGGTCCTGGTGGCGATTGCTGGCCTCAAATGGCTGGC
ATGATCCCTCTTCCGTACAGTACGTTTGATTGGCAAGGTGACCTACCTCTGAGATATCCT
CAGAAGGATCTTGTAATCTATGAGATGCATTTACGTGGGTTTACAAAGCACAGTTCAAGC
AATGTAGAACATCCAGGGACTTACATTGGGGCTATATCAAAGCTTGACTATCTGAAGGAG
CTTGGAGTTAACTGTGTAGAGTTGATGCCCTGCCATGAATTCAATGAGCTGGAGTACTTC
AGCTGCTCTTCCAAGATGAACTTCTGGGGATACTCCACGATAAACTTTTTTTCACCAATG
ATAAGATATTCATCAGGTGGGATAAGAAACTGTGGCCGTGATGCCATAAATGAATTCAAA
ACTTTTGTTAGAGAGGCTCACAAACGGGGAATTGAGGTGATCATGGATGTTGTCTTCAAT
CATACAGCCGAGGGTAATGAGAAAGGACCAATATTATCATTTAGGGGGATAGATAATAGC
ACATACTATATGCTTGCCCCTAAGGGAGAGTTTTACAATTATTCTGGTTGTGGGAATACC
TTCAACTGTAATCATCCTGTGGTCCGTGAATTTATTGTAGATTGTTTAAGATACTGGGTG
ACAGAAATGCATGTTGATGGTTTTCGTTTTGATCTTGCATCCATAATGACCAGAGGATGC
AGTCTTTGGGATCCAGTTAATGTGTATGGAAGTCCAGTAGAAGGTGACATGACTACGACA
GGGACACCTCTTGCTACTCCACCACTTATTGACATGATCAGCAATGATCCAATTCTTGGA
GATGTCAAGCTCATTGCTGAAGCATGGGATGCGGGAGGCCTCTATCAAGTAGGTCAATTT
CCTCACTGGAAAATTTGGTCAGAATGGAATGGAAAGTACCGGGACATTGTTCGTCAATTC
ATTAAAGGCACAGATGGATTTGCTGGTGGTTTCGCTGAATGTTTGTGTGGAAGTCCACAT
CTATACCAGGCAGGGGGGAGGAAACCTTGGCACAGTATCAACTTTGTGTGTGCGCATGAT
GGATTTACGCTGGCTGATTTGGTGACATATAACAAGAAGTACAACTCTTCAAATGGTGAG
GATAATAGAGATGGAGAAAATCATAACCTCAGCTGGAACTGTGGGGAGGAAGGAGAATTT
GCAGGTTTGTCGGTCAAAAGATTGAGGAAGAGGCAAATGCGCAATTTCTTTGTTTCTCTC
ATGGTTTCTCAAGGTGTTCCGATGTTCTACATGGGCGATGAATATGGCCATACAAAAGGA
GGCAACAACAACACATACTGCCATGACCATTATGTCAATTATTTCCGCTGGGACAAGAAA
GAAGAATCCTCTGACTTGCAACGGTTCTGCTCTCTTATGACCAAATTCCGCAAACAATGC
GAGTCCCTTGGCCTCGCAGACTTCCCAACAGCTCAACGGTTGCATTGGCATGGCCATCAG
CCTGGGAAACCTGACTGGTCTGAGACAAGCCGTTTCGTGGCCTTCTCCACGAAAGATGAA
ACGAAAGGCGAGATCTACGTGGCCTTCAACGCCAGCCATTTGCCGGCGGTTGTTGGACTC
CCAGAGCGCCCAGGCTACCGCTGGGAGCCGCTGGTGGACACAGGCAAGCCAGCGCCTTAT
GACTTCCTCACCGACGACCTGCCTGATCGTGTCACGCCGTCCACCTGTTCTCTCATTTCC
TCAACTCCAATCTCTACCCCATGCTCAGCTACTCCTCCATCATCCTTGAATTGCAGCCTG
ATGATTGAAAGAACAAAGTATAGCATAGTATAGCAGAGTAAAAAACATATGTTTATAGCC
CTTTTTGCGTATATGTTGAAGTTGTGCGGTCCTTCAATTTTGAAAAAAAGNGTAATCTGT
ATATTCATGCATCTCCTGAGCGNNNAGATAAGCTCCTCCGGGACGAGCTAGCAGNAAAAG
CATTCTC
clustalw multiple alignements is not computed in this case