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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1884 cluster # 1884       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1884#0 length = 708 sequences # 2  

consensusID : consensus_1884#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 708
fasta sequence
                              [CGGCGGGTTTTTTNTCCAAAAAAAACNTTCCCGGCCCAGTCCCAGTTTGCCAACCANACTACCGGGCCAACNAACAAATGTGATTCCCCTCAANACCTTGCCCGGCCCAAAAGTACACGCTCNCAAACCCCGACGCCAANAAGTCGTACTTCTGAAAGGGCTCTCCCACCAGCGGCCAGTTTTACGTCAACCCCCTCAATGTCCCGGTTGAGGACGCTTGTGTCTGGACCAGCCCCACGAACCCAGACTCCGCCGGCAACTGGGCCCCCGTTAACATGGGAGTTGGCAAGGATGTTCACGGCATTACCTACCTTTCCATCTTCCCCAACCTGCCTACTAGCCATGCGCAACTCGATTTCGATATCGAAATCACTGGCGACATTACTGCTCCTTGCGCCCTCAAGGGCGGCTCATACACTGGCGGTGGCAACGGCTGCACTACCGCAATCAGCAAGCCCGGTGGTCAGGCGACCATTGTTTTCAGCAAGGGCAGCTGAATGTTCAATTGAGGTGTTTCTTTTGTCGTTGGATTCGTAGGTGCTCCTTTAAAAGTCAATGTATCTTGGGTGGCATCATCTGCTTTGATCGATCTTTCGTTCTCGCAAAAGCGCGTAAAATGACTGTGGTCTCGCATTAAGCGCGCGGGCGGGGAGGCTTTAGCCTGTTATTTAATGTTTCATTATTATTTACCTGAGAAAAAAAAAAAAA]

[+] EMBL AT003346             [CGGCGGGTTTTTTNTCCAAAAAAAACNTTCCCGGCCCAGTCCCAGTTTGCCAACCANACTACCGGGCCAACNAACAAATGTGATTCCCCTCAANACCTTGCCCGGCCCAAAAGTACACGCTCNCAAACCCCGACGCCAANAAGTCGTACTTCTGAAAGGGCTCTCCCACCAGCGGCCAGTTTTACGTCAACCCCCTCAATGTCCCGGTTGAGGACGCTTGTGTCTGGACCAGCCCCACGAACCCAGACTCCGCCGGCAACTGGGCCCCCGTTAACATGGGAGTTGGCAAGGATGTTCACGGCATTACCTACCTTTCCATCTTCCCCAACCTGCCTACTAGCCATGCGCAACTCGATTTCGATATCGAAATCACTGGCGACATTACTGCTCCTTGCGCCCTCAAGGGCGGCTCATACACTGGCGGTGGCAACGGCTGCACTACCGCAATCAGCAAGCCCGGTGGTCAGGCGACCATTGTTTTCAGCAAGGGCAGCTGAATGTTCAATTGAGGTGTTTCTTTTGTCGTTGGATTCGTAGGTGCTCCTTTAAAAGTCAATGTATCTTGGGTGGCATCATCTGCTTTGATCGATCTTTCGTTCTCGCAAAAGCGCGTAAAATGACTGTGGTCTCGCATTAAGCGCGCGGGCGGGGAGGCTTTAGCCTGTTATTTAATGTTTCATTATTATTTACCTGAGAAAAAAAAAAAAA]
[+] EMBL AT003720             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATTTGTAGGTGCTCCTTTTAAAGTCAATGTATCTTGGGTGGCATCATCTGCTTTGATCGATCTTTCGTTCTCGCAAAAGCGCGTAAAATGACTGTGGTCTCGCATTAAGCGCGCGGGCGGGGAGGCTTTAGCCTGTTATTTAATGTTTCATTATTATTTACCTGAGAAAAAAAAAAAA ]


>consensus_1884#0 CGGCGGGTTTTTTNTCCAAAAAAAACNTTCCCGGCCCAGTCCCAGTTTGCCAACCANACT ACCGGGCCAACNAACAAATGTGATTCCCCTCAANACCTTGCCCGGCCCAAAAGTACACGC TCNCAAACCCCGACGCCAANAAGTCGTACTTCTGAAAGGGCTCTCCCACCAGCGGCCAGT TTTACGTCAACCCCCTCAATGTCCCGGTTGAGGACGCTTGTGTCTGGACCAGCCCCACGA ACCCAGACTCCGCCGGCAACTGGGCCCCCGTTAACATGGGAGTTGGCAAGGATGTTCACG GCATTACCTACCTTTCCATCTTCCCCAACCTGCCTACTAGCCATGCGCAACTCGATTTCG ATATCGAAATCACTGGCGACATTACTGCTCCTTGCGCCCTCAAGGGCGGCTCATACACTG GCGGTGGCAACGGCTGCACTACCGCAATCAGCAAGCCCGGTGGTCAGGCGACCATTGTTT TCAGCAAGGGCAGCTGAATGTTCAATTGAGGTGTTTCTTTTGTCGTTGGATTCGTAGGTG CTCCTTTAAAAGTCAATGTATCTTGGGTGGCATCATCTGCTTTGATCGATCTTTCGTTCT CGCAAAAGCGCGTAAAATGACTGTGGTCTCGCATTAAGCGCGCGGGCGGGGAGGCTTTAG CCTGTTATTTAATGTTTCATTATTATTTACCTGAGAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)