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Oryza sativa
cluster # 190 cluster # 190       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_190#0 length = 1461 sequences # 2  

consensusID : consensus_190#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1461
fasta sequence
                              [TGTACCTGTGATCGAGCCTGATGATTTTTTATGTGCTTCATGCAATGGACTTATTTGTTTACACTCGGATAAATCAACAATCAAGATAGCCAACCTTGCAACTGGTGAATGTATGCATCTAGTAAAACCTGTCAGGAACTCAAAGACTGATCACTTCTCTTATTACAGCTTTGGGTTTCACCCAGTGACAAAACAATACAAGGTAATGCACTTTCTTCGTGACGAGCACCTCCATGTTGGTACTAGCTTCAGCATAATTCAAGTTTACACACTCGGTGATGAGAAATGGAGAGATGTTAGAACTCCACAGGCTTTAAGCTTGAGATGTGTGGAAAGATCTGGAGTTGTCAATGTTGGTGGGGCAATGTATTGGCTGACTGAAGATGAGGAAAGTGTTTGGAAACATGCAGTTGTGACCTTTGATCTCAGTGAAGAACTTTTCCAGTGGTTACAGCTCCCAGCAGTTGATCCTGCAAACTATGTGCTTGGTGATCCTGACCAGTGGCTGATTACAGAGGTTGATAGCAATGTGTCTGTAAGCTATTACGAGACAGGGAAGCTGCATATCTGGACAATTGACAGCAAGATAGAGCAAAGCTGGAGTCAGAAGTACAACATTCGCTTATCAATGCTTGAAGTTCCAGGACCACATTGGATCTGCGGTGATAAGATTATCTTGCATGATTTTAATAAGAACCTATATTTCTATGAGTTGATGGGGAAGAATTCTGAGATTGAGTCGAGCAAGTTAGTGAAGCAATTGAGATTCAGCCCCCGCAACAACATGCAATGCTTTATGTTTGTGAAGTCGCTTGTACGGTTGGATGCATTCAGAAAGGCTGGTGTTGTGCGTAGGCCAAAGCGACAGGAGGGTTGGAAATTGAAGAAGTGGGAAGTGTGGATGGATAGGCTCCATCGACTAGAGAATCATTGCAGAAGTATCCATGATATGAAACACAAGATTTATGAAAATGCAGATAAAATGGGCATGGAGATCAAACTAGATTTGCAGCAGACACCAGATTTGGATAGTTCCCTGCGGCTGATCAACTGGTTGGAGTATAGGCGGGTACTAGAGATATTGTGTGTTAATCTCGACAACATGCATGAAGTATTAACGGTCATGAACAACACAACTGGTGCTGCCCATAATAAGGAAAGCCATGTGGCAGATCAGGGTACTTCGAGTTCAGCTGTTGGCATATCTGGCTCATGACAACGACGACAATGTTAACCTCATGATATTTTGGTGATCCTTAAGTTTGTAGCAGCACAAAACTGAGCTGACACTTTTAGCTTTTGTCTGTTCAACCATGGCATCTGCCTATCATCTTTGACGCCATTATGTCTGTCATCTTTTCTTAAAATGTTACTGCTAATGTCAGTTATTGTTTACCGCAATGTTGATGGTGTCAATGCATTCATCACAACGAAGAAATTTTCCTGCAGATAAAAAAAAAA]

[+] EMBL AK063439             [TGTACCTGTGATCGAGCCTGATGATTTTTTATGTGCTTCATGCAATGGACTTATTTGTTTACACTCGGATAAATCAACAATCAAGATAGCCAACCTTGCAACTGGTGAATGTATGCATCTAGTAAAACCTGTCAGGAACTCAAAGACTGATCACTTCTCTTATTACAGCTTTGGGTTTCACCCAGTGACAAAACAATACAAGGTAATGCACTTTCTTCGTGACGAGCACCTCCATGTTGGTACTAGCTTCAGCATAATTCAAGTTTACACACTCGGTGATGAGAAATGGAGAGATGTTAGAACTCCACAGGCTTTAAGCTTGAGATGTGTGGAAAGATCTGGAGTTGTCAATGTTGGTGGGGCAATGTATTGGCTGACTGAAGATGAGGAAAGTGTTTGGAAACATGCAGTTGTGACCTTTGATCTCAGTGAAGAACTTTTCCAGTGGTTACAGCTCCCAGCAGTTGATCCTGCAAACTATGTGCTTGGTGATCCTGACCAGTGGCTGATTACAGAGGTTGATAGCAATGTGTCTGTAAGCTATTACGAGACAGGGAAGCTGCATATCTGGACAATTGACAGCAAGATAGAGCAAAGCTGGAGTCAGAAGTACAACATTCGCTTATCAATGCTTGAAGTTCCAGGACCACATTGGATCTGCGGTGATAAGATTATCTTGCATGATTTTAATAAGAACCTATATTTCTATGAGTTGATGGGGAAGAATTCTGAGATTGAGTCGAGCAAGTTAGTGAAGCAATTGAGATTCAGCCCCCGCAACAACATGCAATGCTTTATGTTTGTGAAGTCGCTTGTACGGTTGGATGCATTCAGAAAGGCTGGTGTTGTGCGTAGGCCAAAGCGACAGGAGGGTTGGAAATTGAAGAAGTGGGAAGTGTGGATGGATAGGCTCCATCGACTAGAGAATCATTGCAGAAGTATCCATGATATGAAACACAAGATTTATGAAAATGCAGATAAAATGGGCATGGAGATCAAACTAGATTTGCAGCAGACACCAGATTTGGATAGTTCCCTGCGGCTGATCAACTGGTTGGAGTATAGGCGGGTACTAGAGATATTGTGTGTTAATCTCGACAACATGCATGAAGTATTAACGGTCATGAACAACACAACTGGTGCTGCCCATAATAAGGAAAGCCATGTGGCAGATCAGGGTACTTCGAGTTCAGCTGTTGGCATATCTGGCTCATGACAACGACGACAATGTTAACCTCATGATATTTTGGTGATCCTTAAGTTTGTAGCAGCACAAAACTGAGCTGACACTTTTAGCTTTTGTCTGTTCAACCATGGCATCTGCCTATCATCTTTGACGCCATTATGTCTGTCATCTTTTCTTAAAATGTTACTGCTAATGTCAGTTAT                                                                        ]
[-] EMBL CA760826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCCCGGCAACAACATGCGATGCTTTATG TTGTGAAGTCGCTTGTACGGTGGCATGCATTCAGAAAGGCTGGTGTTGTGCGTAGGACAAAGCGACAGGAGGGTTGGAAATTGAAGAAGTGGCAAGTGTGGATGGATAGGCTCAATCGACTAGAGAATCATTGCAGAAGTATCCCTGATATGAAACCCAAGATTTATGAAAATGCAGATAAAATGGGCATGGAGATCAAACTAGATTTGCAGCAGACCCCAGATTTGGATAGTTCCCTGCGGCTGATCAACTGGTTGGAGTATAGGCGGGTACTAGAGATATTGTGTGTTAATCTCGACAACATGCATGAAGTATTAACGGTCATGAACAACACAACTGGTGCTGCCCATAATAAGGAAAGCCATGTGGCAGATCAGGGTACTTCGAGTTCAGCTGTTGGCATATCTGGCTCATGACAACGACGACAATGTTAACCTCATGATATTTTGGTGATCCTTAAGTTTGTAGCAGCACAAAACTGAGCTGACACTTTTAGCTTTTGTCTGTTCAACCATGGCATCTGCCTATCATCTTTGACGCCATTATGTCTGTCATCTTTTCTTAAAATGTTACTGCTAATGTCAGTTATTGTTTACCGCAATGTTGATGGTGTCAATGCATTCATCACAACGAAGAAATTTTCCTGCAGATAAAAAAAAAA]


>consensus_190#0 TGTACCTGTGATCGAGCCTGATGATTTTTTATGTGCTTCATGCAATGGACTTATTTGTTT ACACTCGGATAAATCAACAATCAAGATAGCCAACCTTGCAACTGGTGAATGTATGCATCT AGTAAAACCTGTCAGGAACTCAAAGACTGATCACTTCTCTTATTACAGCTTTGGGTTTCA CCCAGTGACAAAACAATACAAGGTAATGCACTTTCTTCGTGACGAGCACCTCCATGTTGG TACTAGCTTCAGCATAATTCAAGTTTACACACTCGGTGATGAGAAATGGAGAGATGTTAG AACTCCACAGGCTTTAAGCTTGAGATGTGTGGAAAGATCTGGAGTTGTCAATGTTGGTGG GGCAATGTATTGGCTGACTGAAGATGAGGAAAGTGTTTGGAAACATGCAGTTGTGACCTT TGATCTCAGTGAAGAACTTTTCCAGTGGTTACAGCTCCCAGCAGTTGATCCTGCAAACTA TGTGCTTGGTGATCCTGACCAGTGGCTGATTACAGAGGTTGATAGCAATGTGTCTGTAAG CTATTACGAGACAGGGAAGCTGCATATCTGGACAATTGACAGCAAGATAGAGCAAAGCTG GAGTCAGAAGTACAACATTCGCTTATCAATGCTTGAAGTTCCAGGACCACATTGGATCTG CGGTGATAAGATTATCTTGCATGATTTTAATAAGAACCTATATTTCTATGAGTTGATGGG GAAGAATTCTGAGATTGAGTCGAGCAAGTTAGTGAAGCAATTGAGATTCAGCCCCCGCAA CAACATGCAATGCTTTATGTTTGTGAAGTCGCTTGTACGGTTGGATGCATTCAGAAAGGC TGGTGTTGTGCGTAGGCCAAAGCGACAGGAGGGTTGGAAATTGAAGAAGTGGGAAGTGTG GATGGATAGGCTCCATCGACTAGAGAATCATTGCAGAAGTATCCATGATATGAAACACAA GATTTATGAAAATGCAGATAAAATGGGCATGGAGATCAAACTAGATTTGCAGCAGACACC AGATTTGGATAGTTCCCTGCGGCTGATCAACTGGTTGGAGTATAGGCGGGTACTAGAGAT ATTGTGTGTTAATCTCGACAACATGCATGAAGTATTAACGGTCATGAACAACACAACTGG TGCTGCCCATAATAAGGAAAGCCATGTGGCAGATCAGGGTACTTCGAGTTCAGCTGTTGG CATATCTGGCTCATGACAACGACGACAATGTTAACCTCATGATATTTTGGTGATCCTTAA GTTTGTAGCAGCACAAAACTGAGCTGACACTTTTAGCTTTTGTCTGTTCAACCATGGCAT CTGCCTATCATCTTTGACGCCATTATGTCTGTCATCTTTTCTTAAAATGTTACTGCTAAT GTCAGTTATTGTTTACCGCAATGTTGATGGTGTCAATGCATTCATCACAACGAAGAAATT TTCCTGCAGATAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)