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Oryza sativa
cluster # 1906 cluster # 1906       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1906#0 length = 1662 sequences # 2  

consensusID : consensus_1906#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1662
fasta sequence
                              [ACCAGGAATTCAGCTAAACTATGGCTTGCATCTATATTAGGTGATGCGCTGCAAGTTGTCTTCCAGAATCTTCTTTTGGAGTCAAATGATGAGATTATTCGATCTTCTGAAAGGGCTTGGAAACTTTTACTTCAGTGCCCTACGGAGGACCTTGAGTCTGCTGCAAGTTCATATTTTAGTAATTGGGTGCAACTTGCCACTACTCCATATGGCACAGCATTGGATTCTGCAAAAATGTTTTTGCCAGTTGCACTTCCACGAGGAAGTCGTTCAAGAGCTGCTGCAAAGATCAAATCTGCAAGGTTAGAACATGAAAATACGAGAATGATATCTTTTGGTTCTACCGGAGAGAACACTTCACAGGAAAAGCATTCTGAAGCTTCCTTGAGTGTTTCAAAAATAATTGTGGGGTCTGATTCGGACAAATCTGTTACTCATACGCGAGTGCTGACGTCAATGGCCCTTGGTCTGTTTGCCTCTAAGTTGCCAGTGGGGTCGTGGCAAGTTGTTCTTGGTCCACTAGCAAGCGATCTCATGTCTCTCTCAGGAGTCCAGAGACAGGTGGCTTCTATGGTTATTGTTTCTTGGTTTAAAGACCTCAGAAAAAGTGATCCTGCTGCGGTGGGTACATTGCTAGCTTTCTTATCCTCCCTGAAAGGGTGGATGTTGGACTTACTGGCTTGCTCTGACCCTTCATTTCCTACAAAAGATTCTCCGCTTCCATATGCTGAGCTTGCAAGAACATACAGGAAGATGCGCAATGAAGCCAATAATTTGTTCCAGTCAATAGAATCTTGTGCTCTTCTTAAAGAGTATACAAGCAACTTAAACTTTGAAGCTGACATGCTGAGTGTTGATGATGCTATTAACTTCACTTCAAAGCTTTTGTTACCATCTGAACCTGATTTTAGTTTGGACAGTGATAAAATTGTCTTGAACAATATAGAGTCAGCAAAACAAGGTCTATTGTCTACGTCAGGCTACTTGAAATGTGTTCAGAATAATTTGCATGTGACAGTTTCCTCTTTAGTGGCCTCTGCTGTAGTCTGGATGGCAGGGCTGCCTAGTAAGTTGAACCCAGTCATTTTGCCTTTAATGGCTGCTGTAAAAAGGGAACAGGAGGAAATACTTCAGGACAAAGCTGCAGATGCACTTGCTGAGCTCATTTTTAGTTGTGTTGGCCGCAAACCTGGCCCAAACGACAAACTAACAAAGAACCTCTGCACGTTAACATGCACTGATGCAAGTGAGACACCTCAAGCTGCAGTTATAAACTCAATTCAGGTTATTGAGGACCAAAACTTGCTGTCGATTGGTAAGCGTTTTAGCAATCACAAATCCAGGGGCCAGATGACTTCCGGTGGTGAATCGAAGTCGGAGGGTTTTATAAGCCGGCGTGGATCGGAGTTGGCTTTTAAGCATCTTTGTGAGAAATTTGGAGCATCCTTATTTGAAAGGCTTCCCAAGTTATGGGATTGCCTTACGGAGTTTCTTAAACCCGTCAAGACTGGAGATGATCTTATGAAAGAAGATCCAAGTATTGCGCAGTTAGGAAGATCTTGTGAGGACAATGAACCGCAGTCCCTTATAAATAATATCCAGGTTGTTCGTTCGGTTACACCTCATTTGGCTGAGCCCTTGAGGCCTCAATTGCTAAGTCTC]

[+] EMBL AK070938             [ACCAGGAATTCAGCTAAACTATGGCTTGCATCTATATTAGGTGATGCGCTGCAAGTTGTCTTCCAGAATCTTCTTTTGGAGTCAAATGATGAGATTATTCGATCTTCTGAAAGGGCTTGGAAACTTTTACTTCAGTGCCCTACGGAGGACCTTGAGTCTGCTGCAAGTTCATATTTTAGTAATTGGGTGCAACTTGCCACTACTCCATATGGCACAGCATTGGATTCTGCAAAAATGTTTTTGCCAGTTGCACTTCCACGAGGAAGTCGTTCAAGAGCTGCTGCAAAGATCAAATCTGCAAGGTTAGAACATGAAAATACGAGAATGATATCTTTTGGTTCTACCGGAGAGAACACTTCACAGGAAAAGCATTCTGAAGCTTCCTTGAGTGTTTCAAAAATAATTGTGGGGTCTGATTCGGACAAATCTGTTACTCATACGCGAGTGCTGACGTCAATGGCCCTTGGTCTGTTTGCCTCTAAGTTGCCAGTGGGGTCGTGGCAAGTTGTTCTTGGTCCACTAGCAAGCGATCTCATGTCTCTCTCAGGAGTCCAGAGACAGGTGGCTTCTATGGTTATTGTTTCTTGGTTTAAAGACCTCAGAAAAAGTGATCCTGCTGCGGTGGGTACATTGCTAGCTTTCTTATCCTCCCTGAAAGGGTGGATGTTGGACTTACTGGCTTGCTCTGACCCTTCATTTCCTACAAAAGATTCTCCGCTTCCATATGCTGAGCTTGCAAGAACATACAGGAAGATGCGCAATGAAGCCAATAATTTGTTCCAGTCAATAGAATCTTGTGCTCTTCTTAAAGAGTATACAAGCAACTTAAACTTTGAAGCTGACATGCTGAGTGTTGATGATGCTATTAACTTCACTTCAAAGCTTTTGTTACCATCTGAACCTGATTTTAGTTTGGACAGTGATAAAATTGTCTTGAACAATATAGAGTCAGCAAAACAAGGTCTATTGTCTACGTCAGGCTACTTGAAATGTGTTCAGAATAATTTGCATGTGACAGTTTCCTCTTTAGTGGCCTCTGCTGTAGTCTGGATGGCAGGGCTGCCTAGTAAGTTGAACCCAGTCATTTTGCCTTTAATGGCTGCTGTAAAAAGGGAACAGGAGGAAATACTTCAGGACAAAGCTGCAGATGCACTTGCTGAGCTCATTTTTAGTTGTGTTGGCCGCAAACCTGGCCCAAACGACAAACTAACAAAGAACCTCTGCACGTTAACATGCACTGATGCAAGTGAGACACCTCAAGCTGCAGTTATAAACTCAATTCAGGTTATTGAGGACCAAAACTTGCTGTCGATTGGTAAGCGTTTTAGCAATCACAAATCCAGGGGCCAGATGACTTCCGGTGGTGAATCGAAGTCGGAGGGTTTTATAAGCCGGCGTGGATCGGAGTTGGCTTTTAAGCATCTTTGTGAGAAATTTGGAGCATCCTTATTTGAAAGGCTTCCCAAGTTATGGGATTGCCTTACGGAGTTTCTTAAACCCGTCAAGACTGGAGA                                                                                                                                                    ]
[+] EMBL CB639580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTGCCTAGTAAGTTGAACCCAGTCATTTTGCCTTTAATGGCTGCTGTAAAAAGGGAACAGGAGGAAATACTTCAGGACAAAGCTGCAGATGCACTTGCTGAGCTCATTTTTAGTTGTGTTGGCCGCAAACCTGGCCCAAACGACAAACTAACAAAGAACCTCTGCACGTTAACATGCACTGATGCAAGTGAGACACCTCAAGCTGCAGTTATAAACTCAATTCAGGTTATTGAGGACCAAAACTTGCTGTCGATTGGTAAGCGTTTTAGCAATCACAAATCCAGGGGCCAGATGACTTCCGGTGGTGAATCGAAGTCGGAGGGTTTTATAAGCCGGCGTGGATCGGAGTTGGCTTTTAAGCATCTTTGTGAGAAATTTGGAGCATCCTTATTTGAAAAGCTTCCCAAGTTATGGGATTGCCTTACGGAGTTTCTTAAACCCGTCAAGACTGGAGATGATCTTATGAAAGAAGATCCAAGTATTGCGCAGTTAGGAAGATCTTGTGAGGACAATGAACCGCAGTCCCTTATAAATAATATCCAGGTTGTTCGTTCGGTTACACCTCATTTGGCTGAGCCCTTGAGGCCTCAATTGCTAAGTCTC]


>consensus_1906#0 ACCAGGAATTCAGCTAAACTATGGCTTGCATCTATATTAGGTGATGCGCTGCAAGTTGTC TTCCAGAATCTTCTTTTGGAGTCAAATGATGAGATTATTCGATCTTCTGAAAGGGCTTGG AAACTTTTACTTCAGTGCCCTACGGAGGACCTTGAGTCTGCTGCAAGTTCATATTTTAGT AATTGGGTGCAACTTGCCACTACTCCATATGGCACAGCATTGGATTCTGCAAAAATGTTT TTGCCAGTTGCACTTCCACGAGGAAGTCGTTCAAGAGCTGCTGCAAAGATCAAATCTGCA AGGTTAGAACATGAAAATACGAGAATGATATCTTTTGGTTCTACCGGAGAGAACACTTCA CAGGAAAAGCATTCTGAAGCTTCCTTGAGTGTTTCAAAAATAATTGTGGGGTCTGATTCG GACAAATCTGTTACTCATACGCGAGTGCTGACGTCAATGGCCCTTGGTCTGTTTGCCTCT AAGTTGCCAGTGGGGTCGTGGCAAGTTGTTCTTGGTCCACTAGCAAGCGATCTCATGTCT CTCTCAGGAGTCCAGAGACAGGTGGCTTCTATGGTTATTGTTTCTTGGTTTAAAGACCTC AGAAAAAGTGATCCTGCTGCGGTGGGTACATTGCTAGCTTTCTTATCCTCCCTGAAAGGG TGGATGTTGGACTTACTGGCTTGCTCTGACCCTTCATTTCCTACAAAAGATTCTCCGCTT CCATATGCTGAGCTTGCAAGAACATACAGGAAGATGCGCAATGAAGCCAATAATTTGTTC CAGTCAATAGAATCTTGTGCTCTTCTTAAAGAGTATACAAGCAACTTAAACTTTGAAGCT GACATGCTGAGTGTTGATGATGCTATTAACTTCACTTCAAAGCTTTTGTTACCATCTGAA CCTGATTTTAGTTTGGACAGTGATAAAATTGTCTTGAACAATATAGAGTCAGCAAAACAA GGTCTATTGTCTACGTCAGGCTACTTGAAATGTGTTCAGAATAATTTGCATGTGACAGTT TCCTCTTTAGTGGCCTCTGCTGTAGTCTGGATGGCAGGGCTGCCTAGTAAGTTGAACCCA GTCATTTTGCCTTTAATGGCTGCTGTAAAAAGGGAACAGGAGGAAATACTTCAGGACAAA GCTGCAGATGCACTTGCTGAGCTCATTTTTAGTTGTGTTGGCCGCAAACCTGGCCCAAAC GACAAACTAACAAAGAACCTCTGCACGTTAACATGCACTGATGCAAGTGAGACACCTCAA GCTGCAGTTATAAACTCAATTCAGGTTATTGAGGACCAAAACTTGCTGTCGATTGGTAAG CGTTTTAGCAATCACAAATCCAGGGGCCAGATGACTTCCGGTGGTGAATCGAAGTCGGAG GGTTTTATAAGCCGGCGTGGATCGGAGTTGGCTTTTAAGCATCTTTGTGAGAAATTTGGA GCATCCTTATTTGAAAGGCTTCCCAAGTTATGGGATTGCCTTACGGAGTTTCTTAAACCC GTCAAGACTGGAGATGATCTTATGAAAGAAGATCCAAGTATTGCGCAGTTAGGAAGATCT TGTGAGGACAATGAACCGCAGTCCCTTATAAATAATATCCAGGTTGTTCGTTCGGTTACA CCTCATTTGGCTGAGCCCTTGAGGCCTCAATTGCTAAGTCTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)