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Oryza sativa
cluster # 1907 cluster # 1907       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1907#0 length = 2114 sequences # 2  

consensusID : consensus_1907#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2114
fasta sequence
                              [CACACAAGCACTGAATTAAATCCAGTCATCCAAGTTCCCTACCCTCCTACCGTGACAGAAGAAAGGAACAGCAATGGCGAAGAAGAACTACGGTCAAGTGTACAACATCCTCGGGTGGGGCGACCCCTACTTCACCGTGAACTCCCATGGCCACCTCGCCGTCAAGCCCCATGGCCGCGACACCATGTCCGGCCAGGACATCGACGTCCACTCCGTCATCCACAGAGCTCTCGCCACCACCATCACCACCAACGACGGCGACAAGAAGCCCCAGTTCCCGATGATCCTCCGCTTCCCCGACGTGCTCAAGAACCGCCTCGACTCCCTCCACGCCGCCTTCCATGGCGCCGTCGACAGCACCGGCTACGCGTCCAGGTACCAGGGCGTGTTCCCCATCAAGGTGAACCAGAACAAGGCCGTCGTCCAGGACCTCGTCACCTTCGGCCATGGCTACAGCTACGGCCTCGAGGCTGGCTCCAAGCCGGAGCTGCTCATCGCCATGAGCTGCCTCGCCAAGGCCAAGCCCGGAGCTTACCTGGTCTGCAATGGCTACAAGGACGCCGACTACGTCGCGCTCGCGCTCTCCGCGCGCGCCATGGGCCTCAACGCCATCATCGTGCTGGAGATGGAGGAGGAGCTCGACATCGTCGTCGAGCAGAGCGCCAGGCTCGGCGTCGAGCCGGTCATCGGCGTCCGCGCCAAGCTTCTCACCAAGATTCCGGGACACTTCGGCTCCACGGCCGGCAAGCACGGCAAGTTCGGGATGCTCGCCGACAAGATCTACGAGGTGGCCGGCAAGCTGAAGAAGATGGGGAAGCTGCACTGGCTGAAGCTGCTGCACTACCATGTCGGCTCCATGATCCCGACCACCGACATCGTGTACAACGCGGCGGCCGAGGCCGCAGGAATCTACTGCGCGCTGGTGAAGGAGCACGGCGCGACGGGGATGACCACGCTGGACTGCGGCGGCGGGCTCGGCGTCGACTACGACGGGACGCGGTCGGGCAGCTCCGACATGTCGGTGGCGTACGGGCTCGAGCAGTACGCGTCCAGCATCGTGCAGGCGGTGCGGCTCACGTGCGACGACAATGGCGTCCCCCACCCGGTGCTCTGCACCGAGAGCGGCCGCGCCATGGCGTCGCACCACTCCATGATCATCCTCGAGGCGCTCTCGGCGATCCCGGAGCCGCAGGACGAGGAGGACACCCATCACCGGCTGCTCAGCAAGATCCAGGACCTCTCCTCCAAGCAGCCAAGAACTGCTCATACCGTCAATGGCGGCGGCGGCGTGGACGCCATGCACTCGCACGCCGTGGAGCTGAAGAAGCACGGGATCGAGATGTACAAGCTGGCGAAGAAGCTGTCCAAGAGGGTGACCGGCGACGCCAACGGCATCTACAACTACCACATGAACCTCTCCGTCTTCTCCCTCGTCCCCGACTTCTGGGGCATCGGCCAGCTCTTCCCGATGATGCCGGTGAGCCGGCTGAACGAGAAGCCGACCATCAACGGCACGCTGGTCGACATCACCTGCGACAGCGACGGCAAGGTAGAGAAGTTCATCCGCGACGCCGTGACGCTGCCGCTGCACCCACTCGACGACGCGGCGGCGGAGCACGGCGGCTACTACGTGGCGGCGCTGCTGTCGGGGGCGTACCAGGAGGCCCTGGCGTGCAAGCACAACCTGTTCAGTGGCCCCACGCTCGTGCGCGTCGAGAGCGCCGGCGGCGGCGGCGCGTTCAAGATCGTCTCCGTTGAGCTCGGCCCGACGGCGGAGGAGGTCATCGGCACGATGAGGTACGACGTGAAGAACGACATTAGCGATGTGATCGAGAAGGTTGCGACGGAGAATGGCGTGTGGCCGATGGTTGAGCCGCTAATGAAGAAAGGGCTGACCACCATGCCCTACCTCAACGATTACAAGCCCCCCAAAACCACCTTTTAAGCTTGTTTAGAAGTAGTCTTTATCGACATATAAATAAGAGTGCCTCGACCATGATCCATGCCTCCATGGACGAGCACACGGAGCACAGTCTGTATGACTGTATATTTGCCTGCTTCATACTAGTAGTTTGGTGTTGTATTCTCGAATAAATAACAGGGAATTGCTAAAT]

[+] EMBL AK058573             [CACACAAGCACTGAATTAAATCCAGTCATCCAAGTTCCCTACCCTCCTACCGTGACAGAAGAAAGGAACAGCAATGGCGAAGAAGAACTACGGTCAAGTGTACAACATCCTCGGGTGGGGCGACCCCTACTTCACCGTGAACTCCCATGGCCACCTCGCCGTCAAGCCCCATGGCCGCGACACCATGTCCGGCCAGGACATCGACGTCCACTCCGTCATCCACAGAGCTCTCGCCACCACCATCACCACCAACGACGGCGACAAGAAGCCCCAGTTCCCGATGATCCTCCGCTTCCCCGACGTGCTCAAGAACCGCCTCGACTCCCTCCACGCCGCCTTCCATGGCGCCGTCGACAGCACCGGCTACGCGTCCAGGTACCAGGGCGTGTTCCCCATCAAGGTGAACCAGAACAAGGCCGTCGTCCAGGACCTCGTCACCTTCGGCCATGGCTACAGCTACGGCCTCGAGGCTGGCTCCAAGCCGGAGCTGCTCATCGCCATGAGCTGCCTCGCCAAGGCCAAGCCCGGAGCTTACCTGGTCTGCAATGGCTACAAGGACGCCGACTACGTCGCGCTCGCGCTCTCCGCGCGCGCCATGGGCCTCAACGCCATCATCGTGCTGGAGATGGAGGAGGAGCTCGACATCGTCGTCGAGCAGAGCGCCAGGCTCGGCGTCGAGCCGGTCATCGGCGTCCGCGCCAAGCTTCTCACCAAGATTCCGGGACACTTCGGCTCCACGGCCGGCAAGCACGGCAAGTTCGGGATGCTCGCCGACAAGATCTACGAGGTGGCCGGCAAGCTGAAGAAGATGGGGAAGCTGCACTGGCTGAAGCTGCTGCACTACCATGTCGGCTCCATGATCCCGACCACCGACATCGTGTACAACGCGGCGGCCGAGGCCGCAGGAATCTACTGCGCGCTGGTGAAGGAGCACGGCGCGACGGGGATGACCACGCTGGACTGCGGCGGCGGGCTCGGCGTCGACTACGACGGGACGCGGTCGGGCAGCTCCGACATGTCGGTGGCGTACGGGCTCGAGCAGTACGCGTCCAGCATCGTGCAGGCGGTGCGGCTCACGTGCGACGACAATGGCGTCCCCCACCCGGTGCTCTGCACCGAGAGCGGCCGCGCCATGGCGTCGCACCACTCCATGATCATCCTCGAGGCGCTCTCGGCGATCCCGGAGCCGCAGGACGAGGAGGACACCCATCACCGGCTGCTCAGCAAGATCCAGGACCTCTCCTCCAAGCAGCCAAGAACTGCTCATACCGTCAATGGCGGCGGCGGCGTGGACGCCATGCACTCGCACGCCGTGGAGCTGAAGAAGCACGGGATCGAGATGTACAAGCTGGCGAAGAAGCTGTCCAAGAGGGTGACCGGCGACGCCAACGGCATCTACAACTACCACATGAACCTCTCCGTCTTCTCCCTCGTCCCCGACTTCTGGGGCATCGGCCAGCTCTTCCCGATGATGCCGGTGAGCCGGCTGAACGAGAAGCCGACCATCAACGGCACGCTGGTCGACATCACCTGCGACAGCGACGGCAAGGTAGAGAAGTTCATCCGCGACGCCGTGACGCTGCCGCTGCACCCACTCGACGACGCGGCGGCGGAGCACGGCGGCTACTACGTGGCGGCGCTGCTGTCGGGGGCGTACCAGGAGGCCCTGGCGTGCAAGCACAACCTGTTCAGTGGCCCCACGCTCGTGCGCGTCGAGAGCGCCGGCGGCGGCGGCGCGTTCAAGATCGTCTCCGTTGAGCTCGGCCCGACGGCGGAGGAGGTCATCGGCACGATGAGGTACGACGTGAAGAACGACATTAGCGATGTGATCGAGAAGGTTGCGACGGAGAATGGCGTGTGGCCGATGGTTGAGCCGCTAATGAAGAAAGGGCTGACCACCATGCCCTACCTCAACGATTACAAGCCCCCCAAAACCACCTTTTAAGCTTGTTTAGAAGTAGTCTTTATCGACATATAAATAAGAGTGCCTCGACCATGATCCATGCCTCCATGGACGAGCACACGGAGCACAGTCTGTATGACTGTATATTTGCCTGCTTCATACTAGTAGTTTGGTGTTGTATTCTCGAATAAATAACA              ]
[+] EMBL AK121110             [                                                                     AGCAATGGCGAAGAAGAACTACGGTCAAGTGTACAACATCCTCGGGTGGGGCGACCCCTACTTCACCGTGAACTCCCATGGCCACCTCGCCGTCAAGCCCCATGGCCGCGACACCATGTCCGGCCAGGACATCGACGTCCACTCCGTCATCCACAGAGCTCTCGCCACCACCATCACCACCAACGACGGCGACAAGAAGCCCCAGTTCCCGATGATCCTCCGCTTCCCCGACGTGCTCAAGAACCGCCTCGACTCCCTCCACGCCGCCTTCCATGGCGCCGTCGACAGCACCGGCTACGCGTCCAGGTACCAGGGCGTGTTCCCCATCAAGGTGAACCAGAACAAGGCCGTCGTCCAGGACCTCGTCACCTTCGGCCATGGCTACAGCTACGGCCTCGAGGCTGGCTCCAAGCCGGAGCTGCTCATCGCCATGAGCTGCCTCGCCAAGGCCAAGCCCGGAGCTTACCTGGTCTGCAATGGCTACAAGGACGCCGACTACGTCGCGCTCGCGCTCTCCGCGCGCGCCATGGGCCTCAACGCCATCATCGTGCTGGAGATGGAGGAGGAGCTCGACATCGTCGTCGAGCAGAGCGCCAGGCTCGGCGTCGAGCCGGTCATCGGCGTCCGCGCCAAGCTTCTCACCAAGATTCCGGGACACTTCGGCTCCACGGCCGGCAAGCACGGCAAGTTCGGGATGCTCGCCGACAAGATCTACGAGGTGGCCGGCAAGCTGAAGAAGATGGGGAAGCTGCACTGGCTGAAGCTGCTGCACTACCATGTCGGCTCCATGATCCCGACCACCGACATCGTGTACAACGCGGCGGCCGAGGCCGCAGGAATCTACTGCGCGCTGGTGAAGGAGCACGGCGCGACGGGGATGACCACGCTGGACTGCGGCGGCGGGCTCGGCGTCGACTACGACGGGACGCGGTCGGGCAGCTCCGACATGTCGGTGGCGTACGGGCTCGAGCAGTACGCGTCCAGCATCGTGCAGGCGGTGCGGCTCACGTGCGACGACAATGGCGTCCCCCACCCGGTGCTCTGCACCGAGAGCGGCCGCGCCATGGCGTCGCACCACTCCATGATCATCCTCGAGGCGCTCTCGGCGATCCCGGAGCCGCAGGACGAGGAGGACACCCATCACCGGCTGCTCAGCAAGATCCAGGACCTCTCCTCCAAGCAGCCAAGAACTGCTCATACCGTCAATGGCGGCGGCGGCGTGGACGCCATGCACTCGCACGCCGTGGAGCTGAAGAAGCACGGGATCGAGATGTACAAGCTGGCGAAGAAGCTGTCCAAGAGGGTGACCGGCGACGCCAACGGCATCTACAACTACCACATGAACCTCTCCGTCTTCTCCCTCGTCCCCGACTTCTGGGGCATCGGCCAGCTCTTCCCGATGATGCCGGTGAGCCGGCTGAACGAGAAGCCGACCATCAACGGCACGCTGGTCGACATCACCTGCGACAGCGACGGCAAGGTAGAGAAGTTCATCCGCGACGCCGTGACGCTGCCGCTGCACCCACTCGACGACGCGGCGGCGGAGCACGGCGGCTACTACGTGGCGGCGCTGCTGTCGGGGGCGTACCAGGAGGCCCTGGCGTGCAAGCACAACCTGTTCAGTGGCCCCACGCTCGTGCGCGTCGAGAGCGCCGGCGGCGGCGGCGCGTTCAAGATCGTCTCCGTTGAGCTCGGCCCGACGGCGGAGGAGGTCATCGGCACGATGAGGTACGACGTGAAGAACGACATTAGCGATGTGATCGAGAAGGTTGCGACGGAGAATGGCGTGTGGCCGATGGTTGAGCCGCTGATGAAGAAAGGGCTGACCACCATGCCCTACCTCAACGATTACAAGCCCCCCAAAACCACCTTTTAAGCTTGTTTAGAAGTAGTCTTTATCGACATATAAATAAAAGTGCCTCGACCATGATCCATGCCTCCATGGACGAGCACACGGAGCACAGTCTGTATGACTGTATATTTGCCTGCTTCATACTAGTAGTTTGGTGTTGTATTCTCGAATAAATAACAGGGAATTGCTAAAT]


>consensus_1907#0 CACACAAGCACTGAATTAAATCCAGTCATCCAAGTTCCCTACCCTCCTACCGTGACAGAA GAAAGGAACAGCAATGGCGAAGAAGAACTACGGTCAAGTGTACAACATCCTCGGGTGGGG CGACCCCTACTTCACCGTGAACTCCCATGGCCACCTCGCCGTCAAGCCCCATGGCCGCGA CACCATGTCCGGCCAGGACATCGACGTCCACTCCGTCATCCACAGAGCTCTCGCCACCAC CATCACCACCAACGACGGCGACAAGAAGCCCCAGTTCCCGATGATCCTCCGCTTCCCCGA CGTGCTCAAGAACCGCCTCGACTCCCTCCACGCCGCCTTCCATGGCGCCGTCGACAGCAC CGGCTACGCGTCCAGGTACCAGGGCGTGTTCCCCATCAAGGTGAACCAGAACAAGGCCGT CGTCCAGGACCTCGTCACCTTCGGCCATGGCTACAGCTACGGCCTCGAGGCTGGCTCCAA GCCGGAGCTGCTCATCGCCATGAGCTGCCTCGCCAAGGCCAAGCCCGGAGCTTACCTGGT CTGCAATGGCTACAAGGACGCCGACTACGTCGCGCTCGCGCTCTCCGCGCGCGCCATGGG CCTCAACGCCATCATCGTGCTGGAGATGGAGGAGGAGCTCGACATCGTCGTCGAGCAGAG CGCCAGGCTCGGCGTCGAGCCGGTCATCGGCGTCCGCGCCAAGCTTCTCACCAAGATTCC GGGACACTTCGGCTCCACGGCCGGCAAGCACGGCAAGTTCGGGATGCTCGCCGACAAGAT CTACGAGGTGGCCGGCAAGCTGAAGAAGATGGGGAAGCTGCACTGGCTGAAGCTGCTGCA CTACCATGTCGGCTCCATGATCCCGACCACCGACATCGTGTACAACGCGGCGGCCGAGGC CGCAGGAATCTACTGCGCGCTGGTGAAGGAGCACGGCGCGACGGGGATGACCACGCTGGA CTGCGGCGGCGGGCTCGGCGTCGACTACGACGGGACGCGGTCGGGCAGCTCCGACATGTC GGTGGCGTACGGGCTCGAGCAGTACGCGTCCAGCATCGTGCAGGCGGTGCGGCTCACGTG CGACGACAATGGCGTCCCCCACCCGGTGCTCTGCACCGAGAGCGGCCGCGCCATGGCGTC GCACCACTCCATGATCATCCTCGAGGCGCTCTCGGCGATCCCGGAGCCGCAGGACGAGGA GGACACCCATCACCGGCTGCTCAGCAAGATCCAGGACCTCTCCTCCAAGCAGCCAAGAAC TGCTCATACCGTCAATGGCGGCGGCGGCGTGGACGCCATGCACTCGCACGCCGTGGAGCT GAAGAAGCACGGGATCGAGATGTACAAGCTGGCGAAGAAGCTGTCCAAGAGGGTGACCGG CGACGCCAACGGCATCTACAACTACCACATGAACCTCTCCGTCTTCTCCCTCGTCCCCGA CTTCTGGGGCATCGGCCAGCTCTTCCCGATGATGCCGGTGAGCCGGCTGAACGAGAAGCC GACCATCAACGGCACGCTGGTCGACATCACCTGCGACAGCGACGGCAAGGTAGAGAAGTT CATCCGCGACGCCGTGACGCTGCCGCTGCACCCACTCGACGACGCGGCGGCGGAGCACGG CGGCTACTACGTGGCGGCGCTGCTGTCGGGGGCGTACCAGGAGGCCCTGGCGTGCAAGCA CAACCTGTTCAGTGGCCCCACGCTCGTGCGCGTCGAGAGCGCCGGCGGCGGCGGCGCGTT CAAGATCGTCTCCGTTGAGCTCGGCCCGACGGCGGAGGAGGTCATCGGCACGATGAGGTA CGACGTGAAGAACGACATTAGCGATGTGATCGAGAAGGTTGCGACGGAGAATGGCGTGTG GCCGATGGTTGAGCCGCTAATGAAGAAAGGGCTGACCACCATGCCCTACCTCAACGATTA CAAGCCCCCCAAAACCACCTTTTAAGCTTGTTTAGAAGTAGTCTTTATCGACATATAAAT AAGAGTGCCTCGACCATGATCCATGCCTCCATGGACGAGCACACGGAGCACAGTCTGTAT GACTGTATATTTGCCTGCTTCATACTAGTAGTTTGGTGTTGTATTCTCGAATAAATAACA GGGAATTGCTAAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)