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Oryza sativa
cluster # 1932 cluster # 1932       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1932#0 length = 1950 sequences # 2  

consensusID : consensus_1932#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1950
fasta sequence
                              [CGTCGTCGTCGGCGCCAGCCACCGCCCTTCTCCCCAACCAACCACGCGCTTCCCCTCTCCGCTTCCACCTCCTCTCGGGTTCCCTCCCGTCGATGCCACCGCGCCATTCCTCTTCTTCTCCTCACTCGCCCTGCGGCTGAAGCAATGGAGCTCCCGTGCCCGAGGCTGCTGCTGCTTCTTCGTCTTCTTGTGTTCTTGGTTGCGGTTTCTTGGCCGCTCTGCGGCGCAGGGACTGAAGGCCTCGGAGTTGGAGAGGAGGGGTTGAGCAGCATTGGTGCTTCTTCTGGTTCTAGGAACGTTAGAAGACTTCTGCAGACTGGTGGAGTAAACCAAGGTGCACCAGCTCCTCTACCACTTGAACAATCTCCATCAGCATCAGGACCGGTGTCTTCTCCATCACCCTCGCCATGTGTATCCCCACCGAAAGGCTCACCATCACCATCACCATCTTCAAAAATCATAGCACACAGATCTCCACACCATCCATTCACAACCCCTCCACAATTGGTTAGGCCTAAGCCTACAACTCGGCGAGCTGAGCACGATCATTCAGTTGAAACTACAGGTCGCTCTTGGTTTAAACGTTCCTGGACAACTTATGGTTTTATCGCAGCAGGGATTGCTGCTCTCCTTATCATATCAGCAGCTGGTGCATTCTACTGCCGAGCTAAAAAGATGGGGACTGTGAGGCCATGGGCAACGGGACTTAGCGGGCAATTGCAAAAGGCTTTTGTAACCGGTGTGCCTGCATTGAAACGATCAGAGCTGGAAACAGCGTGCGAGGATTTTAGCAATATAATTGGTTGTACATCTACCTGTACACTGTACAAGGGAACTTTATCTAGTGGAGTTGAAATAGCAGTGGCATCAAGTTTGGTAACGTCTGCAGACGATTGGTCAAAAGAATGTGAATCTCGGTACAGGAGAAAGATCACAAGTTTGTCCAAAGTAAGCCACAAGAACTTTATGAACTTGCTTGGCTATTGTGAGGAAGAGCAACCTTTTACCAGAGTGATGGTGTTTGAATATGCTCCAAATGGAACACTTTTTGAGTATCTGCATGTTAGAGAAGCCGAGAAGCTGGATTGGATGACGCGGCTCAGGATATCCATGGGAATCGCTTACTGTCTCGAGCATATGCATCAGCTTAAACCACCTGTTGTGCCAAGGAATTTCGACTCGACGACCATATACCTTACCGACGATTTCGCTGCAAAGGTGTCCGACCTTGAATTTTGGAGCGGTGCAAAGGAACCAAATCCAGCCACCAGCAACTCCAGCTCCTCCTCGGACCTCGAGAACACGGTGCGCAAGTATGGCATGGTATTGCTGGAGATGCTGACCGGAAGAGTTCCCGATTCTGAGGAGGACGGGCCACTGGAACGGCTGGCGTCTCGCTACTTCGATGGCGAGACGCGCCTCGCAGAGCTGATTGACCCGAGCATCGGTTCCTTCTCTGAAGAAGCCGCGCGTTCGCTGTGCGAAGTGGTGAGGAGCTGCATTGATCCTGATCCTAAGAGGAGGCCGACCATGGCGGAGGTTGCAGCTCGGATGAGGGAGATCACCGCGCTGGGTCCGGACGGAGCAACTCCGAAGGTGTCGCCGCTGTGGTGGGCTGAGCTGGAGATCATGTCCTCCGAGAGCTAATCACTAGCTGCATCAAGAATGGCATTTTTCTTAAAATTTTTGCGGGGAAAGAATGGCGTTCATGTCTGATGTCTCGTTCTGAAAATTCTTTCGTTTGTCGGTTGCCGCTAATCTTGCTCGTGGAATTTGTGTTCAGGTAGAATCTTAGAAGATGTTCTGAATGTTTGTTTCCTGTGCATAGCTGCAGATATAGTGAGTGCTACTTTACATGTAAAAGAGTGGTTAGTTTTCAGCAGACTGAACTGCAAACATTTTAGCTGACTCTGCAATGGACAAAAGAGTTCTGAGTTTCATCTTTGGCAT]

[+] EMBL AK066380             [CGTCGTCGTCGGCGCCAGCCACCGCCCTTCTCCCCAACCAACCACGCGCTTCCCCTCTCCGCTTCCACCTCCTCTCGGGTTCCCTCCCGTCGATGCCACCGCGCCATTCCTCTTCTTCTCCTCACTCGCCCTGCGGCTGAAGCAATGGAGCTCCCGTGCCCGAGGCTGCTGCTGCTTCTTCGTCTTCTTGTGTTCTTGGTTGCGGTTTCTTGGCCGCTCTGCGGCGCAGGGACTGAAGGCCTCGGAGTTGGAGAGGAGGGGTTGAGCAGCATTGGTGCTTCTTCTGGTTCTAGGAACGTTAGAAGACTTCTGCAGACTGGTGGAGTAAACCAAGGTGCACCAGCTCCTCTACCACTTGAACAATCTCCATCAGCATCAGGACCGGTGTCTTCTCCATCACCCTCGCCATGTGTATCCCCACCGAAAGGCTCACCATCACCATCACCATCTTCAAAAATCATAGCACACAGATCTCCACACCATCCATTCACAACCCCTCCACAATTGGTTAGGCCTAAGCCTACAACTCGGCGAGCTGAGCACGATCATTCAGTTGAAACTACAGGTCGCTCTTGGTTTAAACGTTCCTGGACAACTTATGGTTTTATCGCAGCAGGGATTGCTGCTCTCCTTATCATATCAGCAGCTGGTGCATTCTACTGCCGAGCTAAAAAGATGGGGACTGTGAGGCCATGGGCAACGGGACTTAGCGGGCAATTGCAAAAGGCTTTTGTAACCGGTGTGCCTGCATTGAAACGATCAGAGCTGGAAACAGCGTGCGAGGATTTTAGCAATATAATTGGTTGTACATCTACCTGTACACTGTACAAGGGAACTTTATCTAGTGGAGTTGAAATAGCAGTGGCATCAAGTTTGGTAACGTCTGCAGACGATTGGTCAAAAGAATGTGAATCTCGGTACAGGAGAAAGATCACAAGTTTGTCCAAAGTAAGCCACAAGAACTTTATGAACTTGCTTGGCTATTGTGAGGAAGAGCAACCTTTTACCAGAGTGATGGTGTTTGAATATGCTCCAAATGGAACACTTTTTGAGTATCTGCATGTTAGAGAAGCCGAGAAGCTGGATTGGATGACGCGGCTCAGGATATCCATGGGAATCGCTTACTGTCTCGAGCATATGCATCAGCTTAAACCACCTGTTGTGCCAAGGAATTTCGACTCGACGACCATATACCTTACCGACGATTTCGCTGCAAAGGTGTCCGACCTTGAATTTTGGAGCGGTGCAAAGGAACCAAATCCAGCCACCAGCAACTCCAGCTCCTCCTCGGACCTCGAGAACACGGTGCGCAAGTATGGCATGGTATTGCTGGAGATGCTGACCGGAAGAGTTCCCGATTCTGAGGAGGACGGGCCACTGGAACGGCTGGCGTCTCGCTACTTCGATGGCGAGACGCGCCTCGCAGAGCTGATTGACCCGAGCATCGGTTCCTTCTCTGAAGAAGCCGCGCGTTCGCTGTGCGAAGTGGTGAGGAGCTGCATTGATCCTGATCCTAAGAGGAGGCCGACCATGGCGGAGGTTGCAGCTCGGATGAGGGAGATCACCGCGCTGGGTCCGGACGGAGCAACTCCGAAGGTGTCGCCGCTGTGGTGGGCTGAGCTGGAGATCATGTCCTCCGAGAGCTAATCACTAGCTGCATCAAGAATGGCATTTTTCTTAAAATTTTTGCGGGGAAAGAATGGCGTTCATGTCTGATGTCTCGTTCTGAAAATTCTTTCGTTTGTCGGTTGCCGCTAATCTTGCTCGTGGAATTTGTGTTCAGGTAGAATCTTAGAAGATGTTCTGAATGTTTGTTTCCTGTGCATAGCTGCAGATATAGTGAGTGCTACTTTACATGTAAAAGAGTGGTTAGTTTTCAGCAGACTGAACTGCAAACATTTTAGCTGACTCTGCAATGGACAAAAGAGTTCTGAGTTTCATCTTTGGCAT]
[+] EMBL AK061955             [                                                                                                                                                                                                                CTTGGCCGCTCTGCGGCGCAGGGACTGAAGGCCTCGGAGTTGGAGAGGAGGGGTTGAGCAGCATTGGTGCTTCTTCTGGTTCTAGGAACGTTAGAAGACTTCTGCAGACTGGTGGAGTAAACCAAGGTGCACCAGCTCCTCTACCACTTGAACAATCTCCATCAGCATCAGGACCGGTGTCTTCTCCATCACCCTCGCCATGGGTATCCCCACCGAAAGGCTCACCATCACCATCACCATCTTCAAAAATCATAGCACACAGATCTCCACACCATCCATTCACAACCCCTCCACAATTGGTTAGGCCTAAGCCTACAACTCGGCGAGCTGAGCACGATCATTCAGTTGAAACTACAGGTCGCTCTTGGTTTAAACGTTCCTGGACAACTTATGGTTTTATCGCAGCAGGGATTGCTGCTCTCCTTATCATATCAGCAGCTGGTGCATTCTACTGCCGAGCTAAAAAGATGGGGACTGTGAGGCCATGGGCAACGGGACTTAGCGGGCAATTGCAAAAGGCTTTTGTAACCGGTGTGCCTGCATTGAAACGATCAGAGCTGGAAACAGCGTGCGAGGATTTTAGCAATATAATTGGTTGTACATCTACCTGTACACTGTACAAGGGAACTTTATCTAGTGGAGTTGAAATAGCAGTGGCATCAAGTTTGGTAACGTCTGCAGACGATTGGTCAAAAGAATGTGAATCTCGGTACAGGAGAAAGATCACAAGTTTGTCCAAAGTAAGCCACAAGAACTTTATGAACTTGCTTGGCTATTGTGAGGAAGAGCAACCTTTTACCAGAGTGATGGTGTTTGAATATGCTCCAAATGGAACACTTTTTGAGTATCTGCATGTTAGAGAAGCCGAGAAGCTGGATTGGATGACGCGGCTCAGGATATCCATGGGAATCGCTTACTGTCTCGAGCATATGCATCAGCTTAAACCACCTGTTGTGCCAAGGAATTTCGACTCGACGACCATATACCTTACCGACGATTTCGCTGCAAAGGTGTCCGACCTTGAATTTTGGAGCGGTGCAAAGGAACCAAATCCAGCCACCAGCAACTCCAGCTCCTCCTCGGACCTCGAGAACACGGTGCGCAAGTATGGCATGGTATTGCTGGAGATGCTGACCGGAAGAGTTCCCGATTCTGAGGAGGACGGGCCACTGGAACGGCTGGCGTCTCGCTACTTCGATGGCGAGACGCGCCTCGCAGAGCTGATTGACCCGAGCATCGGTTCCTTCTCTGAAGAAGCCGCGCGTTCGCTGTGCGAAGTGGTGAGGAGCTGCATTGATCCTGATCCTAAGAGGAGGCCGACCATGGCGGAGGTTGCAGCTCGGATGAGGGAGATCACCGCGCTGGGTCCGGACGGAGCAACTCCGAAGGTGTCGCCGCTGTGGTGGGCTGAGCTGGAGATCATGTCCTCCGAGAGCTAATCACTAGCTGCATCAAGAATGGCATTTTTCTTAAAATTTTTGCGGGGAAAGAATGGCGTTCATGTCTGATGTCTCGTTCTGAAAATTCTTTCGTTTGTCGGTTGCCGCTAATCTTGCTCGTGGAATTTGTGTTCAGGTAGAATCTTAGAAGATGTTCTGAATGTTTGTTTCCTGTGCATAGCTGCAGATATAGTGAGTGCTACTTTACATGTAAAAGAGTGGTTAGTTTTCAGCAGACTGAACTGCAAACATTTTAGCTGACTCTGCAATGGACAAAAGAGT                     ]


>consensus_1932#0 CGTCGTCGTCGGCGCCAGCCACCGCCCTTCTCCCCAACCAACCACGCGCTTCCCCTCTCC GCTTCCACCTCCTCTCGGGTTCCCTCCCGTCGATGCCACCGCGCCATTCCTCTTCTTCTC CTCACTCGCCCTGCGGCTGAAGCAATGGAGCTCCCGTGCCCGAGGCTGCTGCTGCTTCTT CGTCTTCTTGTGTTCTTGGTTGCGGTTTCTTGGCCGCTCTGCGGCGCAGGGACTGAAGGC CTCGGAGTTGGAGAGGAGGGGTTGAGCAGCATTGGTGCTTCTTCTGGTTCTAGGAACGTT AGAAGACTTCTGCAGACTGGTGGAGTAAACCAAGGTGCACCAGCTCCTCTACCACTTGAA CAATCTCCATCAGCATCAGGACCGGTGTCTTCTCCATCACCCTCGCCATGTGTATCCCCA CCGAAAGGCTCACCATCACCATCACCATCTTCAAAAATCATAGCACACAGATCTCCACAC CATCCATTCACAACCCCTCCACAATTGGTTAGGCCTAAGCCTACAACTCGGCGAGCTGAG CACGATCATTCAGTTGAAACTACAGGTCGCTCTTGGTTTAAACGTTCCTGGACAACTTAT GGTTTTATCGCAGCAGGGATTGCTGCTCTCCTTATCATATCAGCAGCTGGTGCATTCTAC TGCCGAGCTAAAAAGATGGGGACTGTGAGGCCATGGGCAACGGGACTTAGCGGGCAATTG CAAAAGGCTTTTGTAACCGGTGTGCCTGCATTGAAACGATCAGAGCTGGAAACAGCGTGC GAGGATTTTAGCAATATAATTGGTTGTACATCTACCTGTACACTGTACAAGGGAACTTTA TCTAGTGGAGTTGAAATAGCAGTGGCATCAAGTTTGGTAACGTCTGCAGACGATTGGTCA AAAGAATGTGAATCTCGGTACAGGAGAAAGATCACAAGTTTGTCCAAAGTAAGCCACAAG AACTTTATGAACTTGCTTGGCTATTGTGAGGAAGAGCAACCTTTTACCAGAGTGATGGTG TTTGAATATGCTCCAAATGGAACACTTTTTGAGTATCTGCATGTTAGAGAAGCCGAGAAG CTGGATTGGATGACGCGGCTCAGGATATCCATGGGAATCGCTTACTGTCTCGAGCATATG CATCAGCTTAAACCACCTGTTGTGCCAAGGAATTTCGACTCGACGACCATATACCTTACC GACGATTTCGCTGCAAAGGTGTCCGACCTTGAATTTTGGAGCGGTGCAAAGGAACCAAAT CCAGCCACCAGCAACTCCAGCTCCTCCTCGGACCTCGAGAACACGGTGCGCAAGTATGGC ATGGTATTGCTGGAGATGCTGACCGGAAGAGTTCCCGATTCTGAGGAGGACGGGCCACTG GAACGGCTGGCGTCTCGCTACTTCGATGGCGAGACGCGCCTCGCAGAGCTGATTGACCCG AGCATCGGTTCCTTCTCTGAAGAAGCCGCGCGTTCGCTGTGCGAAGTGGTGAGGAGCTGC ATTGATCCTGATCCTAAGAGGAGGCCGACCATGGCGGAGGTTGCAGCTCGGATGAGGGAG ATCACCGCGCTGGGTCCGGACGGAGCAACTCCGAAGGTGTCGCCGCTGTGGTGGGCTGAG CTGGAGATCATGTCCTCCGAGAGCTAATCACTAGCTGCATCAAGAATGGCATTTTTCTTA AAATTTTTGCGGGGAAAGAATGGCGTTCATGTCTGATGTCTCGTTCTGAAAATTCTTTCG TTTGTCGGTTGCCGCTAATCTTGCTCGTGGAATTTGTGTTCAGGTAGAATCTTAGAAGAT GTTCTGAATGTTTGTTTCCTGTGCATAGCTGCAGATATAGTGAGTGCTACTTTACATGTA AAAGAGTGGTTAGTTTTCAGCAGACTGAACTGCAAACATTTTAGCTGACTCTGCAATGGA CAAAAGAGTTCTGAGTTTCATCTTTGGCAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)