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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1937 cluster # 1937       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1937#0 length = 576 sequences # 2  

consensusID : consensus_1937#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 576
fasta sequence
                              [CACCCAGTTCCGCAGGTCTCCTTCCCCCCACCGAAACAGGAGTCATTGCCGCCACCAGCAAAGGAAGCTGAAGCTCCACCTGCAAAGGANTCTAAACCTCCCACCAGCAATGGAAGCTGAAGCTCCCACCGGCGTTCGACACTACTGTACTCTTACCGCCGNTGATGGCGCACCAGTACGCCTCACCTCCACCACCTCAGTT-CCAAGGATACTAAGCTCCATGGAGAGATTAACGACGACGACGACGTCGTCATCAATGAGAAGTGATCCATAAAGCTAAAGAATCTGGCATGCATGTATGTAAACACTTCTCTAGCGGCTAAAGTGCATGCGCATTGCGATTAATCCCCTTCAA-TTTTTTTTTGTATGCATCCAATATATACTTTCTTGGTTCTTCTAGATAGTTACATATGTATGTGCTGATGTGCACATGAGCAAACTGTACGACAAGGTCATATTCATGATTCATGCCTTGTGGTAGCAATATCCATAAATATATATCCCTTTTGTTCAAAAAAAGAAATGTAATTCTGTCTCTTTGCATGAGATCGAAGAAACAAAGTTGTTTGAAAAAAA]

[+] EMBL C98502               [CACCCAGTTCCGCAGGTCTCCTTCCCCCCACCGAAACAGGAGTCATTGCCGCCACCAGCAAAGGAAGCTGAAGCTCCACCTGCAAAGGANTCTAAACCTCCCACCAGCAATGGAAGCTGAAGCTCCCACCGGCGTTCGACACTACTGTACTCTTACCGCCGNTGATGGCGCACCAGTACGCCTCACCTCCACCACCTCAGTT CCAAGGATACTAAGCTCCATGGAGAGATTAACGACGACGACGACGTCGTCATCAATGAGAAGTGATCCATAAAGCTAAAGAATCTGGCATGCATGTATGTAAACACTTCTCTAGCGGCTAAAGTGCATGCGCATTGCGATTAATCCCCTTCAA TTTTTTTTTGTATGCATCCAATATATACTTTCTTGGTTCTTCTAGATAGTTACATATGTATGTGCTGATGTGCACATGAGCAAACTGTACGACAAGGTCATATTCATGATTCATGCCTTGTGGTAGCAATATCCATAAATATATATCCCTTTTGTTCAAAAA                                                           ]
[+] EMBL C98526               [                                                                                                          GCAATGGAAGCTGAAGCT CCACCGGCGTTCGACACTACTGTACTCTTACCGCCGGTGATGGCGCACCAGTACGCCTCACCTCCACCACCTCAGTTCCCAAGGATACTAAGCTCCATGGAGAGATTAACGACGACGACGACGTCGTCATCAATGAGAAGTGATCCATAAAGCTAAAGAATCTGGCATGCATGTATGTAAACACTTCTCTAGCGGCTAAAGTGCATGCGCATTGCGATTAATCCCCTTCAATTTTTTTTTTGTATGCATCCAATATATACTTTCTTGGTTCTTCTAGATAGTTACATATGTATGTGCTGATGTGCACATGAGCAAACTGTACGACAAGGTCATATTCATGATTCATGCCTTGTGGTAGCAATATCCATAAATATATATCCCTTTTGTTCAACAGAAGAAATGTAATTCTGTCTCTTTGCATGAGATCGAAGAAACAAAGTTGTTTGAAAAAAA]


>consensus_1937#0 CACCCAGTTCCGCAGGTCTCCTTCCCCCCACCGAAACAGGAGTCATTGCCGCCACCAGCA AAGGAAGCTGAAGCTCCACCTGCAAAGGANTCTAAACCTCCCACCAGCAATGGAAGCTGA AGCTCCCACCGGCGTTCGACACTACTGTACTCTTACCGCCGNTGATGGCGCACCAGTACG CCTCACCTCCACCACCTCAGTTCCAAGGATACTAAGCTCCATGGAGAGATTAACGACGAC GACGACGTCGTCATCAATGAGAAGTGATCCATAAAGCTAAAGAATCTGGCATGCATGTAT GTAAACACTTCTCTAGCGGCTAAAGTGCATGCGCATTGCGATTAATCCCCTTCAATTTTT TTTTGTATGCATCCAATATATACTTTCTTGGTTCTTCTAGATAGTTACATATGTATGTGC TGATGTGCACATGAGCAAACTGTACGACAAGGTCATATTCATGATTCATGCCTTGTGGTA GCAATATCCATAAATATATATCCCTTTTGTTCAAAAAAAGAAATGTAATTCTGTCTCTTT GCATGAGATCGAAGAAACAAAGTTGTTTGAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)