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Oryza sativa
cluster # 195 cluster # 195       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_195#0 length = 2079 sequences # 2  

consensusID : consensus_195#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2079
fasta sequence
                              [GGGCATGGGGATCGATCGCTCGATCGCCCATTAGCCACACCCGTTGGATCAGATTCAATCAGACGTTCAGTTTTTCTTCTTTCTTTTTTTTTTTTCTCGAGAAAATATCCACAGTCATCGTTGTCTCCTCCGGTCTCCCCTTTCCCCCAGCCGCCGTCTTAGGCGCTGCGCCACCCGGAATCCCGGAGCCACCGCCGCGCGCACCCTGATCTCGGGTGGCACCGAACCTTCAGCCGCCGCCACCGACGAGGAACGGCTGCCCAGAGCCTCCAGGGATTCGACGTTCAATCTTTGCAATCTCCTCCTCCAGCCACACCGCCGAAGTCTCCGTGTCGGTTTTCTTCCCTTCCCTGACATGAGGTAGGTGTTATAAGTGGAGCCAGGAGCCTTTGAATCTTTGCAAGTATTCAAGCAGAAGCAGACATTGGATCTCAATCTGCACCAATGGAGGCCTGTAGCATAGCCAGGATTATCAACTTAGGGGATCTAGCTATGCGCCCGAAAAAATTGTGCCGTCTACTCATCAAACTCTTATCAGATCTCCTGCTGAAAGAATCCGGAAAATATGAATATGTGCATCCACCTCCTATGGAGACTCAAGCGGCAGATTTACCGGAGCTTTCACAGGATATGCTGATGGAGATCTTTGCCCTCCTGGAGATCCCTGACCTTGTTCGTGCGGGATCTGTCTGCCAATCCTGGCGTTCTGCCTACACCAGCCTACGCGACATGGGGCAGTACAAGCAGCAGACTCCCTGCCTGCTCTACACCACTGAATCCTCAGGCGAGAAGGTTTCATGCCTCTACAGTCTTGTGGAGAAGAGGGCCTTCAGGTTAACTCTCCCAGGGACGCCGCTGCACAAAAGACTGCCGATTGGATCCTCACATGGTTGGGTGGTTACTGCTGATGAGTTATCCGAGCTTCATCTTGTCAATCCAATCACCGGACAACAGATTGCCCTCCCACCGGTGATCACCATTGAGCAGGTGAAGCCCATCTTCAATGACATTGGTGTTGTCCAAGGCTACAAGATCGGATGGTACTGTGCAGAGAAAGATTATGGAGATCCGTATGGAGAGCCGTCGCCAATCCTTACTCCCAGTGAGCTGCGTGACCACCTATACTACAAGGCATTTGTGTTTCCTGATCCCTTGACTAGAAGCTTCATTGTGGTGGTCATCCACTATCCATTTTGTCAACTTTCCTTTGCAAGAGTAGGAGATGATAAATGGACCTGGTTACCCCACAACACTCGCTACAGAGATTGTGTATACCATGATGGTCTGTTGTATGCATTGACATCACATGGACAGATCGATGCCTTTGATATCACAGCCTCCGTTGTCACTAGGAAGGAAATTATTAAACACATGAAAGGTATTTCTGAGAGCATGTACATTATTCGAGCTCCATGGGGTGATCTTCTGCAAGTTTGGAGGACAGTGGATGCTGCAGAGCAGCAGGATGGGGATGACGATACTTTATGTTATGAGACTGAGGATGGTATAGTGCCTGTAATGCGTACTAAAGAAATCAAGGTTTTTAAAGTTGACATGGCAGCAAATAAGCTTGTGCAAATAAACAGCTTGCCATACCATGTGTTGTTTCTTGGTCACAACCAGTCGATTTGTCTTAGAGCTGAAGAATACCCACAATTAAGAGCAAATCATGTCTACTTCACTGACGACCATGTGGACTTGCTGATGCTAATTAAAAATGGCCCCCGTGATATTGGAGTTTTTGACTTGGAGAATCGCAGAAGGAAGAAAACTATATCACCGATCTGGTCTAGCTGGCCTAGTCCCGTATGGATAACACCAAGTATTGCTAAAGCTGATGGGTGGTGTGTGCCGTGTGGCGTGGGGACGCCGGTGATGGGAGGTAGGGAGCTAGCGAGGAGAGAAGGAGGGCTGATGGCATGTAGTCTCACCTAATAACTTTTAGTGATGAATGATTTATTTTTGTGAAAGAAGAAAAAATGATATGACAAGTGAGACCACTGCTATGTAAGCACCACCTAAGCCCAGAAGACCATGTAAACCGCCAAAGAATGTATATATCAATGTGGTTTTAAAAGT]

[+] EMBL AK106960             [GGGCATGGGGATCGATCGCTCGATCGCCCATTAGCCACACCCGTTGGATCAGATTCAATCAGACGTTCAGTTTTTCTTCTTTCTTTTTTTTTTTTCTCGAGAAAATATCCACAGTCATCGTTGTCTCCTCCGGTCTCCCCTTTCCCCCAGCCGCCGTCTTAGGCGCTGCGCCACCCGGAATCCCGGAGCCACCGCCGCGCGCACCCTGATCTCGGGTGGCACCGAACCTTCAGCCGCCGCCACCGACGAGGAACGGCTGCCCAGAGCCTCCAGGGATTCGACGTTCAATCTTTGCAATCTCCTCCTCCAGCCACACCGCCGAAGTCTCCGTGTCGGTTTTCTTCCCTTCCCTGACATGAGGTAGGTGTTATAAGTGGAGCCAGGAGCCTTTGAATCTTTGCAAGTATTCAAGCAGAAGCAGACATTGGATCTCAATCTGCACCAATGGAGGCCTGTAGCATAGCCAGGATTATCAACTTAGGGGATCTAGCTATGCGCCCGAAAAAATTGTGCCGTCTACTCATCAAACTCTTATCAGATCTCCTGCTGAAAGAATCCGGAAAATATGAATATGTGCATCCACCTCCTATGGAGACTCAAGCGGCAGATTTACCGGAGCTTTCACAGGATATGCTGATGGAGATCTTTGCCCTCCTGGAGATCCCTGACCTTGTTCGTGCGGGATCTGTCTGCCAATCCTGGCGTTCTGCCTACACCAGCCTACGCGACATGGGGCAGTACAAGCAGCAGACTCCCTGCCTGCTCTACACCACTGAATCCTCAGGCGAGAAGGTTTCATGCCTCTACAGTCTTGTGGAGAAGAGGGCCTTCAGGTTAACTCTCCCAGGGACGCCGCTGCACAAAAGACTGCCGATTGGATCCTCACATGGTTGGGTGGTTACTGCTGATGAGTTATCCGAGCTTCATCTTGTCAATCCAATCACCGGACAACAGATTGCCCTCCCACCGGTGATCACCATTGAGCAGGTGAAGCCCATCTTCAATGACATTGGTGTTGTCCAAGGCTACAAGATCGGATGGTACTGTGCAGAGAAAGATTATGGAGATCCGTATGGAGAGCCGTCGCCAATCCTTACTCCCAGTGAGCTGCGTGACCACCTATACTACAAGGCATTTGTGTTTCCTGATCCCTTGACTAGAAGCTTCATTGTGGTGGTCATCCACTATCCATTTTGTCAACTTTCCTTTGCAAGAGTAGGAGATGATAAATGGACCTGGTTACCCCACAACACTCGCTACAGAGATTGTGTATACCATGATGGTCTGTTGTATGCATTGACATCACATGGACAGATCGATGCCTTTGATATCACAGCCTCCGTTGTCACTAGGAAGGAAATTATTAAACACATGAAAGGTATTTCTGAGAGCATGTACATTATTCGAGCTCCATGGGGTGATCTTCTGCAAGTTTGGAGGACAGTGGATGCTGCAGAGCAGCAGGATGGGGATGACGATACTTTATGTTATGAGACTGAGGATGGTATAGTGCCTGTAATGCGTACTAAAGAAATCAAGGTTTTTAAAGTTGACATGGCAGCAAATAAGCTTGTGCAAATAAACAGCTTGCCATACCATGTGTTGTTTCTTGGTCACAACCAGTCGATTTGTCTTAGAGCTGAAGAATACCCACAATTAAGAGCAAATCATGTCTACTTCACTGACGACCATGTGGACTTGCTGATGCTAATTAAAAATGGCCCCCGTGATATTGGAGTTTTTGACTTGGAGAATCGCAGAAGGAAGAAAACTATATCACCGATCTGGTCTAGCTGGCCTAGTCCCGTATGGATAACACCAAGTATTGCTAAAGCTGATGGGTGGTGTGTGCCGTGTGGCGTGGGGACGCCGGTGATGGGAGGTAGGGAGCTAGCGAGGAGAGAAGGAGGGCTGATGGCATGTAGTCTCACCTAATAACTTTTAGTGATGAATGATTTATTTTTGTGAAAGAAGAAAAAATGATATGACAAGTGAGACCACTGCTATGTAAGCACCACCTAAGCCCAGAAGACCATGTAAACCGCCAAAGAATGTATATATCAATGTGGTTTTAAAAGT]
[+] EMBL AK069971             [                                                                                                                                           CTTTCCCCCAGCCGCCGTCTTAGGCGCTGCGCCACCCGGAATCCCGGAGCCACCGCCGCGCGCACCCTGATCTCGGGTGGCACCGAACCTTCAGCCGCCGCCACCGACGAGGAACGGCTGCCCAGAGCCTCCAGGGATTCGACGTTCAATCTTTGCAATCTCCTCCTCCAGCCACACCGCCGAAGTCTCCGTGTCGGTTTTCTTCCCTTCCCTGACATGAGGTAGGTGTTATAAGTGGAGCCAGGAGCCTTTGAATCTTTGCAAGTATTCAAGCAGAAGCAGACATTGGATCTCAATCTGCACCAATGGAGGCCTGTAGCATAGCCAGGATTATCAACTTAGGGGATCTAGCTATGCGCCCGAAAAAATTGTGCCGTCTACTCATCAAACTCTTATCAGATCTCCTGCTGAAAGAATCCGGAAAATATGAATATGTGCATCCACCTCCTATGGAGACTCAAGCGGCAGATTTACCGGAGCTTTCACAGGATATGCTGATGGAGATCTTTGCCCTCCTGGAGATCCCTGACCTTGTTCGTGCGGGATCTGTCTGCCAATCCTGGCGTTCTGCCTACACCAGCCTACGCGACATGGGGCAGTACAAGCAGCAGACTCCCTGCCTGCTCTACACCACTGAATCCTCAGGCGAGAAGGTTTCATGCCTCTACAGTCTTGTGGAGAAGAGGGCCTTCAGGTTAACTCTCCCAGGGACGCCGCTGCACAAAAGACTGCCGATTGGATCCTCACATGGTTGGGTGGTTACTGCTGATGAGTTATCCGAGCTTCATCTTGTCAATCCAATCACCGGACAACAGATTGCCCTCCCACCGGTGATCACCATTGAGCAGGTGAAGCCCATCTTCAATGACATTGGTGTTGTCCAAGGCTACAAGATCGGATGGTACTGTGCAGAGAAAGATTATGGAGATCCGTATGGAGAGCCGTCGCCAATCCTTACTCCCAGTGAGCTGCGTGACCACCTATACTACAAGGCATTTGTGTTTCCTGATCCCTTGACTAGAAGCTTCATTGTGGTGGTCATCCACTATCCATTTTGTCAACTTTCCTTTGCAAGAGTAGGAGATGATAAATGGACCTGGTTACCCCACAACACTCGCTACAGAGATTGTGTATACCATGATGGTCTGTTGTATGCATTGACATCACATGGACAGATCGATGCCTTTGATATCACAGCCTCCGTTGTCACTAGGAAGGAAATTATTAAACACATGAAAGGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]


>consensus_195#0 GGGCATGGGGATCGATCGCTCGATCGCCCATTAGCCACACCCGTTGGATCAGATTCAATC AGACGTTCAGTTTTTCTTCTTTCTTTTTTTTTTTTCTCGAGAAAATATCCACAGTCATCG TTGTCTCCTCCGGTCTCCCCTTTCCCCCAGCCGCCGTCTTAGGCGCTGCGCCACCCGGAA TCCCGGAGCCACCGCCGCGCGCACCCTGATCTCGGGTGGCACCGAACCTTCAGCCGCCGC CACCGACGAGGAACGGCTGCCCAGAGCCTCCAGGGATTCGACGTTCAATCTTTGCAATCT CCTCCTCCAGCCACACCGCCGAAGTCTCCGTGTCGGTTTTCTTCCCTTCCCTGACATGAG GTAGGTGTTATAAGTGGAGCCAGGAGCCTTTGAATCTTTGCAAGTATTCAAGCAGAAGCA GACATTGGATCTCAATCTGCACCAATGGAGGCCTGTAGCATAGCCAGGATTATCAACTTA GGGGATCTAGCTATGCGCCCGAAAAAATTGTGCCGTCTACTCATCAAACTCTTATCAGAT CTCCTGCTGAAAGAATCCGGAAAATATGAATATGTGCATCCACCTCCTATGGAGACTCAA GCGGCAGATTTACCGGAGCTTTCACAGGATATGCTGATGGAGATCTTTGCCCTCCTGGAG ATCCCTGACCTTGTTCGTGCGGGATCTGTCTGCCAATCCTGGCGTTCTGCCTACACCAGC CTACGCGACATGGGGCAGTACAAGCAGCAGACTCCCTGCCTGCTCTACACCACTGAATCC TCAGGCGAGAAGGTTTCATGCCTCTACAGTCTTGTGGAGAAGAGGGCCTTCAGGTTAACT CTCCCAGGGACGCCGCTGCACAAAAGACTGCCGATTGGATCCTCACATGGTTGGGTGGTT ACTGCTGATGAGTTATCCGAGCTTCATCTTGTCAATCCAATCACCGGACAACAGATTGCC CTCCCACCGGTGATCACCATTGAGCAGGTGAAGCCCATCTTCAATGACATTGGTGTTGTC CAAGGCTACAAGATCGGATGGTACTGTGCAGAGAAAGATTATGGAGATCCGTATGGAGAG CCGTCGCCAATCCTTACTCCCAGTGAGCTGCGTGACCACCTATACTACAAGGCATTTGTG TTTCCTGATCCCTTGACTAGAAGCTTCATTGTGGTGGTCATCCACTATCCATTTTGTCAA CTTTCCTTTGCAAGAGTAGGAGATGATAAATGGACCTGGTTACCCCACAACACTCGCTAC AGAGATTGTGTATACCATGATGGTCTGTTGTATGCATTGACATCACATGGACAGATCGAT GCCTTTGATATCACAGCCTCCGTTGTCACTAGGAAGGAAATTATTAAACACATGAAAGGT ATTTCTGAGAGCATGTACATTATTCGAGCTCCATGGGGTGATCTTCTGCAAGTTTGGAGG ACAGTGGATGCTGCAGAGCAGCAGGATGGGGATGACGATACTTTATGTTATGAGACTGAG GATGGTATAGTGCCTGTAATGCGTACTAAAGAAATCAAGGTTTTTAAAGTTGACATGGCA GCAAATAAGCTTGTGCAAATAAACAGCTTGCCATACCATGTGTTGTTTCTTGGTCACAAC CAGTCGATTTGTCTTAGAGCTGAAGAATACCCACAATTAAGAGCAAATCATGTCTACTTC ACTGACGACCATGTGGACTTGCTGATGCTAATTAAAAATGGCCCCCGTGATATTGGAGTT TTTGACTTGGAGAATCGCAGAAGGAAGAAAACTATATCACCGATCTGGTCTAGCTGGCCT AGTCCCGTATGGATAACACCAAGTATTGCTAAAGCTGATGGGTGGTGTGTGCCGTGTGGC GTGGGGACGCCGGTGATGGGAGGTAGGGAGCTAGCGAGGAGAGAAGGAGGGCTGATGGCA TGTAGTCTCACCTAATAACTTTTAGTGATGAATGATTTATTTTTGTGAAAGAAGAAAAAA TGATATGACAAGTGAGACCACTGCTATGTAAGCACCACCTAAGCCCAGAAGACCATGTAA ACCGCCAAAGAATGTATATATCAATGTGGTTTTAAAAGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)