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Oryza sativa
cluster # 1952 cluster # 1952       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1952#0 length = 1464 sequences # 2  
consensusID : consensus_1952#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1464
fasta sequence 
                              [AAGGAAGGGAAAATATGTTTGTGGATTCGAAAGAAAAGTTGCTTTGCTTCGAGTATCTACGTAATGGAAGCCTTCGCAGTCATCTTGATACTGCCGGATCTTGTGTGCTTCAATGGCAGATTTGTTACCAAATAATCAAAGGTATTTGCCTGGGTTTGCACTATCTGCATGAGAGGAAGATAATTCATCTAGATCTCAAACCAGATAACGTACTGCTCGATGACAGTATGGTGCCTAAAATTGCGGATTTTGGTTTGTCAAGGCTCTTGAGTGAAGAAAAAAGCCGCATGGTCACTGAGAGAATTTTTGGAACAAGGAGATACATGGCACCCGAATACTTAGTTAATGGAGATATCACAGTCAAGTCAGATATATACAGCTTGGGTTTGATAATCAGAGAGATGGTGATGGGTCCTAATAATGAAGGAACAACGACAGAAAATGTACTAGAAATCTGGAGGCATAGGTTGGAACAGGATTCATCAAAGATGAGGCAGACGCCAATCGAAATGCGTTACCGGCAAATAATAGAAGCGTGCATTGAGATATCAGAGACATGCATAGCGGGTAAACCAGATAAGAGGCCAACCACAGGGGATATCCTTCGTCGGCTTGAGAAAGAGGAAGCAGGGAATTGGTCTATCGTCCCAGTTACTCCAGTTGTAGATTGGATAAGCTCGCTATCCAGGTTGATGGAGAGCATAAAGCGAATGGCTGTAACTTCACCCGAACCGCGAACAATTCGAGGTGAGGAGTCCAAAGCGTTGCAATTGCAACCTGGGCCTTCTCAGCCAGGGGACAGGAGACCAGCTGATAAGAGTTTTTGGTTGGATGCTACAAGCAACGCCAAGTGCTACATGCTATCATCGAGATTATTAAAGGTTACATGGGGAGAAAGCCCCGAGCACTGGAAATGGATCACCCTCCCCGATTCTAGGTTTGCCGAATGCGCGGAGCTCCTAAACGTGTACTGGCTGGCGGTGATTGGGGAGATCGCAACGGAGGACCTGACGCCGGGTACTCGCTACGCGGTGTACCTGGTGTACAAGCTGACGGGCACCTCCGTCGGCCTGAGAGGTGGCCAGACGCAGAGGTCATCGCTCAGGCTCTACGGCGAGATCACCGTCTCCACCGGCAAGGTCAGCGTCGACGTCGTCCCTGCAGCGGCGCGCGGAATGGCCGCCGGCGTGGCCTATCCTGTGGCCAGGGGAGACGGCTGGATGGAGCTCAAGCTGGCCGAGTTTGCTGCCGACGAGAAGCTGCTCGGTGAGAAGAAGGTGATAGTGGACTTCCGCGAGGAGAACGACCATGTCAAGAAGAGTGGTCTTGTTATAGAGGGCATGGAGTTCAGGCCCAACAAGTGAAGCTCGCAAAAGGCTCAACATTTTGTTCCACAAGAACAATTTCTAGTATCCTAACTATTCTCAGCACATAAAATGACAAGTTTTATCTCTTTAATATACT]

[+] EMBL AK109689             [AAGGAAGGGAAAATATGTTTGTGGATTCGAAAGAAAAGTTGCTTTGCTTCGAGTATCTACGTAATGGAAGCCTTCGCAGTCATCTTGATACTGCCGGATCTTGTGTGCTTCAATGGCAGATTTGTTACCAAATAATCAAAGGTATTTGCCTGGGTTTGCACTATCTGCATGAGAGGAAGATAATTCATCTAGATCTCAAACCAGATAACGTACTGCTCGATGACAGTATGGTGCCTAAAATTGCGGATTTTGGTTTGTCAAGGCTCTTGAGTGAAGAAAAAAGCCGCATGGTCACTGAGAGAATTTTTGGAACAAGGAGATACATGGCACCCGAATACTTAGTTAATGGAGATATCACAGTCAAGTCAGATATATACAGCTTGGGTTTGATAATCAGAGAGATGGTGATGGGTCCTAATAATGAAGGAACAACGACAGAAAATGTACTAGAAATCTGGAGGCATAGGTTGGAACAGGATTCATCAAAGATGAGGCAGACGCCAATCGAAATGCGTTACCGGCAAATAATAGAAGCGTGCATTGAGATATCAGAGACATGCATAGCGGGTAAACCAGATAAGAGGCCAACCACAGGGGATATCCTTCGTCGGCTTGAGAAAGAGGAAGCAGGGAATTGGTCTATCGTCCCAGTTACTCCAGTTGTAGATTGGATAAGCTCGCTATCCAGGTTGATGGAGAGCATAAAGCGAATGGCTGTAACTTCACCCGAACCGCGAACAATTCGAGGTGAGGAGTCCAAAGCGTTGCAATTGCAACCTGGGCCTTCTCAGCCAGGGGACAGGAGACCAGCTGATAAGAGTTTTTGGTTGGATGCTACAAGCAACGCCAAGTGCTACATGCTATCATCGAGATTATTAAAGGTTACATGGGGAGAAAGCCCCGAGCACTGGAAATGGATCACCCTCCCCGATTCTAGGTTTGCCGAATGCGCGGAGCTCCTAAACGTGTACTGGCTGGCGGTGATTGGGGAGATCGCAACGGAGGACCTGACGCCGGGTACTCGCTACGCGGTGTACCTGGTGTACAAGCTGACGGGCACCTCCGTCGGCCTGAGAGGTGGCCAGACGCAGAGGTCATCGCTCAGGCTCTACGGCGAGATCACCGTCTCCACCGGCAAGGTCAGCGTCGACGTCGTCCCTGCAGCGGCGCGCGGAATGGCCGCCGGCGTGGCCTATCCTGTGGCCAGGGGAGACGGCTGGATGGAGCTCAAGCTGGCCGAGTTTGCTGCCGACGAGAAGCTGCTCGGTGAGAAGAAGGTGATAGTGGACTTCCGCGAGGAGAACGACCATGTCAAGAAGAGTGGTCTTGTTATAGAGGGCATGGAGTTCAGGCCCAACAAGTGAAGCTCGCAAAAGGCTCAACATTTTGTTCCACAAGAACAATTTCTAGTATCCTAACTATTCTCAGCACATAAAATGACAAGTTTTATCTCTTTAATATACT]
[+] EMBL CB640900             [    AAGGGAAAATATGTTTGTGGATTCGAAAGAAAAGTTGCTTTGCTTCGAGTATCTACGTAATGGAAGCCTTCGCAGTCATCTTGATACTGCCGGATCTTGTGTGCTTCAATGGCAGATTTGTTACCAAATAATCAAAGGTATTTGCCTGGGTTTGCACTATCTGCATGAGAGGAAGATAATTCATCTAGATCTCAAACCAGATAACGTACTGCTCGATGACAGTATGGTGCCTAAAATTGCGGATTTTGGTTTGTCAAGGCTCTTGAGTGAAGAAAAAAGCCGCATGGTCACTGAGAGAATTTTTGGAACAAGGAGATACATGGCACCCGAATACTTAGTTAATGGAGATATCACAGTCAAGTCAGATATATACAGCTTGGGTTTGATAATCANAGAGATGGTGATGGGTCCTAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_1952#0
AAGGAAGGGAAAATATGTTTGTGGATTCGAAAGAAAAGTTGCTTTGCTTCGAGTATCTAC
GTAATGGAAGCCTTCGCAGTCATCTTGATACTGCCGGATCTTGTGTGCTTCAATGGCAGA
TTTGTTACCAAATAATCAAAGGTATTTGCCTGGGTTTGCACTATCTGCATGAGAGGAAGA
TAATTCATCTAGATCTCAAACCAGATAACGTACTGCTCGATGACAGTATGGTGCCTAAAA
TTGCGGATTTTGGTTTGTCAAGGCTCTTGAGTGAAGAAAAAAGCCGCATGGTCACTGAGA
GAATTTTTGGAACAAGGAGATACATGGCACCCGAATACTTAGTTAATGGAGATATCACAG
TCAAGTCAGATATATACAGCTTGGGTTTGATAATCAGAGAGATGGTGATGGGTCCTAATA
ATGAAGGAACAACGACAGAAAATGTACTAGAAATCTGGAGGCATAGGTTGGAACAGGATT
CATCAAAGATGAGGCAGACGCCAATCGAAATGCGTTACCGGCAAATAATAGAAGCGTGCA
TTGAGATATCAGAGACATGCATAGCGGGTAAACCAGATAAGAGGCCAACCACAGGGGATA
TCCTTCGTCGGCTTGAGAAAGAGGAAGCAGGGAATTGGTCTATCGTCCCAGTTACTCCAG
TTGTAGATTGGATAAGCTCGCTATCCAGGTTGATGGAGAGCATAAAGCGAATGGCTGTAA
CTTCACCCGAACCGCGAACAATTCGAGGTGAGGAGTCCAAAGCGTTGCAATTGCAACCTG
GGCCTTCTCAGCCAGGGGACAGGAGACCAGCTGATAAGAGTTTTTGGTTGGATGCTACAA
GCAACGCCAAGTGCTACATGCTATCATCGAGATTATTAAAGGTTACATGGGGAGAAAGCC
CCGAGCACTGGAAATGGATCACCCTCCCCGATTCTAGGTTTGCCGAATGCGCGGAGCTCC
TAAACGTGTACTGGCTGGCGGTGATTGGGGAGATCGCAACGGAGGACCTGACGCCGGGTA
CTCGCTACGCGGTGTACCTGGTGTACAAGCTGACGGGCACCTCCGTCGGCCTGAGAGGTG
GCCAGACGCAGAGGTCATCGCTCAGGCTCTACGGCGAGATCACCGTCTCCACCGGCAAGG
TCAGCGTCGACGTCGTCCCTGCAGCGGCGCGCGGAATGGCCGCCGGCGTGGCCTATCCTG
TGGCCAGGGGAGACGGCTGGATGGAGCTCAAGCTGGCCGAGTTTGCTGCCGACGAGAAGC
TGCTCGGTGAGAAGAAGGTGATAGTGGACTTCCGCGAGGAGAACGACCATGTCAAGAAGA
GTGGTCTTGTTATAGAGGGCATGGAGTTCAGGCCCAACAAGTGAAGCTCGCAAAAGGCTC
AACATTTTGTTCCACAAGAACAATTTCTAGTATCCTAACTATTCTCAGCACATAAAATGA
CAAGTTTTATCTCTTTAATATACT

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)