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Oryza sativa
cluster # 1966 cluster # 1966       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1966#0 length = 1278 sequences # 2  

consensusID : consensus_1966#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1278
fasta sequence
                              [AGACGCCATCACCACCACCACTCCACCTTCAATGGCAGCTCGCTCGTGCAGGTTCCTCTACTCCTCCTCCTCCTCCCCCATCGCCACCACCTCCCCGCTGCTCTCCCCCACCCCCTCCGCTGCCACGAGGAGGAAGCTTCTGCTCTCCTCCACCTGCGGCACGATCGCCTCCGCCGCCGCCGCGTCCGCCATGGAGGGGCAGGGCGCCCCCGCTGCTCCCGGAGGCAAGGGAAGCGCCATCGTCGTCGTCGACTCCCACCTCCACGTCTGGGCCTCCCCGCAGCAGGCGGCGGAGAGGTACCCGTATTTCCCTGGGCAGGAGCCGCCGATCCGTGGTGACGTCGACTTGTTGCTCCAGTGTATGGATGAAGCCGGAGTGGACGGAGCTCTCATTGTTCAACCTATCAATCATATGTTTGATCACTCATTAGTTACTAGCGTGTTGAAGAAATACCCATCCAAATTCATTGGTTGCTGTCTTGCTAATCCTGCAGATGATGGAAGCGGCATTAAACAGCTTGAACATCTAATTGTACAAGAAAAGTATCGTGCTGTCCGGTTCAACCCCAACTTATGGCCGTCAGGTCAAAAGATGACAAATGAGGTTGGGAGGTCATTATTCGCTAAGGCTGGAGAACTTGGAGCACCAGTTGGAATCATGGTGATGAAGGGAATCAGTACATATATTCAGGAGATAGAGGAGCTCTGCACAGATTATCCAAAAACTACTGTTATTTTCGATCATATGGCTTTCTGCAAGCCACCAATGAACATTGAAGAAGAGAAGGCCTTCACTTCATTTCTAGAACTATCCAGATTCCCTCAGATTTACGTCAAATACAGTGCGCTCTTTCGTATTTCAAGAGAAGCATATCCATATGAGGACACATCTCAGCTTCTTTCCCGTGTGATCTCTAGCTATGGAGCGAATCGAATAATGTGGGGAAGTGACTTCCCCTTCGTTGTTCCTGAATGTGGCTACAAAGGGGCCAAGGAGGCGATCTCTCATGTCGCCGGCAAGATACCTGTTTCCTCGTCAGATTTGGAATGGATCTTAGGCAAAACAGTGACCCAACTGTTCCAAGGTGCATGGGTTTCTGCATGATAGGGGTGTCATTGGTTAGTGTAGCTTTTATTGGTCAGTAAATATCCTTGCAATGAGAGGGTGAAAAAGATTCTTGTATGAGAGGAAAACGGCGTTATACAGTTAAAGCATTATTCTTTCTATTCGCTAATTGATAACCTGTTTAGGTTATCCTTTTTTGCAAGGTATTAAAT]

[+] EMBL AK101777             [AGACGCCATCACCACCACCACTCCACCTTCAATGGCAGCTCGCTCGTGCAGGTTCCTCTACTCCTCCTCCTCCTCCCCCATCGCCACCACCTCCCCGCTGCTCTCCCCCACCCCCTCCGCTGCCACGAGGAGGAAGCTTCTGCTCTCCTCCACCTGCGGCACGATCGCCTCCGCCGCCGCCGCGTCCGCCATGGAGGGGCAGGGCGCCCCCGCTGCTCCCGGAGGCAAGGGAAGCGCCATCGTCGTCGTCGACTCCCACCTCCACGTCTGGGCCTCCCCGCAGCAGGCGGCGGAGAGGTACCCGTATTTCCCTGGGCAGGAGCCGCCGATCCGTGGTGACGTCGACTTGTTGCTCCAGTGTATGGATGAAGCCGGAGTGGACGGAGCTCTCATTGTTCAACCTATCAATCATATGTTTGATCACTCATTAGTTACTAGCGTGTTGAAGAAATACCCATCCAAATTCATTGGTTGCTGTCTTGCTAATCCTGCAGATGATGGAAGCGGCATTAAACAGCTTGAACATCTAATTGTACAAGAAAAGTATCGTGCTGTCCGGTTCAACCCCAACTTATGGCCGTCAGGTCAAAAGATGACAAATGAGGTTGGGAGGTCATTATTCGCTAAGGCTGGAGAACTTGGAGCACCAGTTGGAATCATGGTGATGAAGGGAATCAGTACATATATTCAGGAGATAGAGGAGCTCTGCACAGATTATCCAAAAACTACTGTTATTTTCGATCATATGGCTTTCTGCAAGCCACCAATGAACATTGAAGAAGAGAAGGCCTTCACTTCATTTCTAGAACTATCCAGATTCCCTCAGATTTACGTCAAATACAGTGCGCTCTTTCGTATTTCAAGAGAAGCATATCCATATGAGGACACATCTCAGCTTCTTTCCCGTGTGATCTCTAGCTATGGAGCGAATCGAATAATGTGGGGAAGTGACTTCCCCTTCGTTGTTCCTGAATGTGGCTACAAAGGGGCCAAGGAGGCGATCTCTCATGTCGCCGGCAAGATACCTGTTTCCTCGTCAGATTTGGAATGGATCTTAGGCAAAACAGTGACCCAACTGTTCCAAGGTGCATGGGTTTCTGCATGATAGGGGTGTCATTGGTTAGTGTAGCTTTTATTGGTCAGTAAATATCCTTGCAATGAGAGGGTGAAAAAGATTCTTGTATGAGAGGAAAACGGCGTTATACAGTTAAAGCATTATTCTTTCTATTCGCTAATTGATAACCTGTTTAGGTTATCCTTTTTTGCAAGGTA      ]
[+] EMBL AK058653             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAGGACTTGGAGCACCAGTTGGAATCATGGTGATGAAGGGAATCAGTACATATATTCAGGAGATAGAGGAGCTCTGCACAGATTATCCAAAAACTACTGTTATTTTCGATCATATGGCTTTCTGCAAGCCACCAATGAACATTGAAGAAGAGAAGGCCTTCACTTCATTTCTAGAACTATCCAGATTCCCTCAGATTTACGTCAAATACAGTGCGCTCTTTCGTATTTCAAGAGAAGCATATCCATATGAGGACACATCTCAGCTTCTTTCCCGTGTGATCTCTAGCTATGGAGCGAATCGAATAATGTGGGGAAGTGACTTCCCCTTCGTTGTTCCTGAATGTGGCTACAAAGGGGCCAAGGAGGCGATCTCTCATGTCGCCGGCAAGATACCTGTTTCCTCGTCAGATTTGGAATGGATCTTAGGCAAAACAGTGACCCAACTGTTCCAAGGTGCATGGGTTTCTGCATGATAGGGGTGTCATTGGTTAGTGTAGCTTTTATTGGTCAGTAAATATCCTTGCAATGAGAGGGTGAAAAAGATTCTTGTATGAGAGGAAAACGGCGTTATCCAGTTAAAGCATTATTCTTTCTATTCGCTAATTGATAACCTGTTTAGGTTATCCTTTTTTGCAAGGTATTAAAT]


>consensus_1966#0 AGACGCCATCACCACCACCACTCCACCTTCAATGGCAGCTCGCTCGTGCAGGTTCCTCTA CTCCTCCTCCTCCTCCCCCATCGCCACCACCTCCCCGCTGCTCTCCCCCACCCCCTCCGC TGCCACGAGGAGGAAGCTTCTGCTCTCCTCCACCTGCGGCACGATCGCCTCCGCCGCCGC CGCGTCCGCCATGGAGGGGCAGGGCGCCCCCGCTGCTCCCGGAGGCAAGGGAAGCGCCAT CGTCGTCGTCGACTCCCACCTCCACGTCTGGGCCTCCCCGCAGCAGGCGGCGGAGAGGTA CCCGTATTTCCCTGGGCAGGAGCCGCCGATCCGTGGTGACGTCGACTTGTTGCTCCAGTG TATGGATGAAGCCGGAGTGGACGGAGCTCTCATTGTTCAACCTATCAATCATATGTTTGA TCACTCATTAGTTACTAGCGTGTTGAAGAAATACCCATCCAAATTCATTGGTTGCTGTCT TGCTAATCCTGCAGATGATGGAAGCGGCATTAAACAGCTTGAACATCTAATTGTACAAGA AAAGTATCGTGCTGTCCGGTTCAACCCCAACTTATGGCCGTCAGGTCAAAAGATGACAAA TGAGGTTGGGAGGTCATTATTCGCTAAGGCTGGAGAACTTGGAGCACCAGTTGGAATCAT GGTGATGAAGGGAATCAGTACATATATTCAGGAGATAGAGGAGCTCTGCACAGATTATCC AAAAACTACTGTTATTTTCGATCATATGGCTTTCTGCAAGCCACCAATGAACATTGAAGA AGAGAAGGCCTTCACTTCATTTCTAGAACTATCCAGATTCCCTCAGATTTACGTCAAATA CAGTGCGCTCTTTCGTATTTCAAGAGAAGCATATCCATATGAGGACACATCTCAGCTTCT TTCCCGTGTGATCTCTAGCTATGGAGCGAATCGAATAATGTGGGGAAGTGACTTCCCCTT CGTTGTTCCTGAATGTGGCTACAAAGGGGCCAAGGAGGCGATCTCTCATGTCGCCGGCAA GATACCTGTTTCCTCGTCAGATTTGGAATGGATCTTAGGCAAAACAGTGACCCAACTGTT CCAAGGTGCATGGGTTTCTGCATGATAGGGGTGTCATTGGTTAGTGTAGCTTTTATTGGT CAGTAAATATCCTTGCAATGAGAGGGTGAAAAAGATTCTTGTATGAGAGGAAAACGGCGT TATACAGTTAAAGCATTATTCTTTCTATTCGCTAATTGATAACCTGTTTAGGTTATCCTT TTTTGCAAGGTATTAAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)