cluster # 1993

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Oryza sativa
cluster # 1993 cluster # 1993 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1993#0 length = 335 sequences # 2

consensusID : consensus_1993#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 335
fasta sequence

                              [TGAAGGAGTAGAAATGTTTTTGAATTTCCTTTCATTCTATGTTGTTGCTTTTTGCACCCA-TCTGTTGCTATTTGTTTTTAGCTTTGCAATTAGTAATGTCTAATTTGTCTGATGTACAAACGACCAAAGTTCTGGAATGCTCACCAGGAAATTATTGATTTCACAATTTGTCTCAGCATATGCCTAGTGCAATGTACAGGAGCCAGTTTTGCCAAAAACAAGCTCTAAGAGCTGAAAATATGCTTACCTTATTAAGTTATTATATTGGTTTTGATGCTGTAACATGCTTTGAGACAATAAATAATGTGTTACACGTACAGAAGACAAAACAAAAA]

[+] EMBL CF330793             [TGAAGGAGTAGAAATGTTTTTGAATTTCCTTTCATTCTATGTTGTTGCTTTTTGCACCCA TCTGTTGCTATTTGTTTTTAGCTTTGCAATTAGTAATGTCTAATTTGTCTGATGTACAAACGACCAAAGTTCTGGAATGCTCACCAGGAAATTATTGATTTCACAATTTGTCTCAGCATATGCCTAGTGCAATGTACAGGAGCCAGTTTTGCCAAAAACAAGCTCTAAGAGCTGAAAATATGCTTACCTTATTAAGTTATTATATTGGTTTTGATGCTGTAACATGCTTTGAGACAATAAATAATGTGTTACACGTACAGAAGACAAAACAAAA ]
[-] EMBL CF330792             [                       ATTTCCTTTCATTCTATGTTGTTGCTTTTTGCACCCATTCTGTTGCTATTTGTTTTTAGCTTTGCAATTAGTAATGTCTAATTTGTCTGATGTACAAACGACCAAAGTTCTGGAATGCTCACCAGGAAATTATTGATTTCACAATTTGTCTCAGCATATGCCTAGTGCAATGTACAGGAGCCAGTTTTGCCAAAAACAAGCTTTAAGAGCTGAAAATATGCTTACCTTATTAAGTTATTATATTGGTTTTGATGCTGTAACATGCTTTGAGACAATAAATAATGTGTTACACGTACAGAAGACAAAACAAAAA]




>consensus_1993#0
TGAAGGAGTAGAAATGTTTTTGAATTTCCTTTCATTCTATGTTGTTGCTTTTTGCACCCA
TCTGTTGCTATTTGTTTTTAGCTTTGCAATTAGTAATGTCTAATTTGTCTGATGTACAAA
CGACCAAAGTTCTGGAATGCTCACCAGGAAATTATTGATTTCACAATTTGTCTCAGCATA
TGCCTAGTGCAATGTACAGGAGCCAGTTTTGCCAAAAACAAGCTCTAAGAGCTGAAAATA
TGCTTACCTTATTAAGTTATTATATTGGTTTTGATGCTGTAACATGCTTTGAGACAATAA
ATAATGTGTTACACGTACAGAAGACAAAACAAAAA

clustalw multiple alignements is not computed in this case