cluster # 2013

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2013 cluster # 2013 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2013#0 length = 1328 sequences # 2
consensusID : consensus_2013#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1328
fasta sequence
                              [AAAAAAAAAATCAAAATCCTTCCCCCTTTCAAATTCGAAATTTCGAATCAAACACGCGCACGCTCCTCTCTCCTCTCCCCTCTCGATCGAGGCACGCTTCTCCGCGGCGGCGGCGCGCGACCGGATCACGGCGGCGGGGGAGGGGAGGGGAGGGGAGGATGCAGCAGAAGCCCGCGGCGGAGGCCATGGAGGAGGAGTTGAAGGGGGAGGCCGTGGGGCCCCGCCGCCCCGGGCTAGGGTTATGGTTGGCGGCGCGGCGGCGGCTGGCCCCCGACGACCCCTTCTTCGCCGCCGGGGACATGGAGCGCGAGCTCCTCGCCAAGCAAGTTGCTCTGGATCTCTCCGAAGATGAACGGTACCAGCTTGAGAGGATGGAAGTGGCGAGTGCCAATGCCCTTTTATGCCCAATTTCTGGCTGTGGTGCTCATCTAGATTGCCTGGAGAACTTTGAGGACCACTATCGCACCCGTCATACTGCTTCATGCTCTGTATGTTGGAGAGTGTATCCAACTTCAAGGCTGCTGAGTATTCATATTTCTGAGGCACATGATTCCTTTTTTCAAGCAAAAGTTGCCCGTGGTTTTCCAATGTATGAGTGTTTGGTGGAGGGTTGTGGGGTGAAGTTGAAGAGCTACAAAAGTCGGCAGCAGCATCTTCTTGATAAGCACCAGTTTCCCAAGTCATTTGAATTCTTCAAAAAAGCACGCCCTTCGCAACGCCAGCGGAACAAGAACCAGAAGCAACGGCAAACAGTTCACAAGGGAGACGATACAAGCGAAACACTAATGGATGTTGATGGGAAGAAGAGCTCAAGGTACATGAATTCCAGATATCGGCCAAAGCAACATGATGGAAAAGAGTCAAAAGAAAATGAGCATAGTAGCTGTAAGGAGGCCAAGAACAACGAAATGGAGGTTGACAAGCAGGTTGATGAGCTTGCTTCGGCCGTATCAAGACTGAGCACAGCGGATTCAACTCCTTCTAGCATAAGCTTTGGTCATCGTCGCTCTCGCGGTCTTGCTTTTGTCCCTAGGTCGATTCGGCAAAACAAGCAGGTTTCTCAGACAGAACCAAAATGACAGCATTTGATACCATCTTTCTCTTCATTGCTGATCTCGGATGCATCAACAATCCTGAATGTGCTGTTTCCTGTACCTGGACATTCACCGAATCCACTAATATACATTCTTGTAGTTGTATCACGAGATATGTCTTCTAGCTGGTTATCCTTGCTTATGGATGTACTGAGCTTCCTGTTACTGCCATGTAGTAGAACAATTTTTCTGAAGCGGCAAATATGAAGTGCAAAATACAAGACAGTTCTTGTG]

[+] EMBL AK060702             [AAAAAAAAAATCAAAATCCTTCCCCCTTTCAAATTCGAAATTTCGAATCAAACACGCGCACGCTCCTCTCTCCTCTCCCCTCTCGATCGAGGCACGCTTCTCCGCGGCGGCGGCGCGCGACCGGATCACGGCGGCGGGGGAGGGGAGGGGAGGGGAGGATGCAGCAGAAGCCCGCGGCGGAGGCCATGGAGGAGGAGTTGAAGGGGGAGGCCGTGGGGCCCCGCCGCCCCGGGCTAGGGTTATGGTTGGCGGCGCGGCGGCGGCTGGCCCCCGACGACCCCTTCTTCGCCGCCGGGGACATGGAGCGCGAGCTCCTCGCCAAGCAAGTTGCTCTGGATCTCTCCGAAGATGAACGGTACCAGCTTGAGAGGATGGAAGTGGCGAGTGCCAATGCCCTTTTATGCCCAATTTCTGGCTGTGGTGCTCATCTAGATTGCCTGGAGAACTTTGAGGACCACTATCGCACCCGTCATACTGCTTCATGCTCTGTATGTTGGAGAGTGTATCCAACTTCAAGGCTGCTGAGTATTCATATTTCTGAGGCACATGATTCCTTTTTTCAAGCAAAAGTTGCCCGTGGTTTTCCAATGTATGAGTGTTTGGTGGAGGGTTGTGGGGTGAAGTTGAAGAGCTACAAAAGTCGGCAGCAGCATCTTCTTGATAAGCACCAGTTTCCCAAGTCATTTGAATTCTTCAAAAAAGCACGCCCTTCGCAACGCCAGCGGAACAAGAACCAGAAGCAACGGCAAACAGTTCACAAGGGAGACGATACAAGCGAAACACTAATGGATGTTGATGGGAAGAAGAGCTCAAGGTACATGAATTCCAGATATCGGCCAAAGCAACATGATGGAAAAGAGTCAAAAGAAAATGAGCATAGTAGCTGTAAGGAGGCCAAGAACAACGAAATGGAGGTTGACAAGCAGGTTGATGAGCTTGCTTCGGCCGTATCAAGACTGAGCACAGCGGATTCAACTCCTTCTAGCATAAGCTTTGGTCATCGTCGCTCTCGCGGTCTTGCTTTTGTCCCTAGGTCGATTCGGCAAAACAAGCAGGTTTCTCAGACAGAACCAAAATGACAGCATTTGATACCATCTTTCTCTTCATTGCTGATCTCGGATGCATCAACAATCCTGAATGTGCTGTTTCCTGTACCTGGACATTCACCGAATCCACTAATATACATTCTTGTAGTTGTATCACGAGATATGTCTTCTAGCTGGTTATCCTTGCTTATGGATGTACTGAGCTTCCTGTTACTGCCATGTAGTAGAACAATTTTTCTGAAGCGGCAAATATGAAGTGCAAAATACAAGACAGTTCTTG  ]
[+] EMBL CF331710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gagtagaaaTAATGGATGTTGATGGGAAGAAGAGCTCAAGGTACATGAATTCCAGATATCGGCCAAAGCAACATGATGGAAAAGAGTCAAAAGAAAATGAGCATAGTAGCTGTAAGGAGGCCAAGAACAACGAAATGGAGGTTGACAAGCAGGTTGATGAGCTTGCTTCGGCCGTATCAAGACTGAGCACAGCGGATTCAACTCCTTCTAGCATAAGCTTTGGTCATCGTCGCTCTCGCGGTCTTGCTTTTGTCCCTAGGTCGATTCGGCAAAACAAGCAGGTTTCTCAGACAGAACCAAAATGACAGCATTTGATACCATCTTTCTCTTCATTGCTGATCTCGGATGCATCAACAATCCTGAATGTGCTGTTTCCTGTACCTGGACATTCACCGAATCCACTAATATACATTCTTGTAGTTGTATCACGAGATATGTCTTCTAGCTGGTTATCCTTGCTTATGGATGTACTGAGCTTCCTGTTACTGCCATGTAGTAGAACAATTTTTCTGAAGCGGCAAATATGAAGTGCAAAATACAAGACAGTTCTTGTG]




>consensus_2013#0
AAAAAAAAAATCAAAATCCTTCCCCCTTTCAAATTCGAAATTTCGAATCAAACACGCGCA
CGCTCCTCTCTCCTCTCCCCTCTCGATCGAGGCACGCTTCTCCGCGGCGGCGGCGCGCGA
CCGGATCACGGCGGCGGGGGAGGGGAGGGGAGGGGAGGATGCAGCAGAAGCCCGCGGCGG
AGGCCATGGAGGAGGAGTTGAAGGGGGAGGCCGTGGGGCCCCGCCGCCCCGGGCTAGGGT
TATGGTTGGCGGCGCGGCGGCGGCTGGCCCCCGACGACCCCTTCTTCGCCGCCGGGGACA
TGGAGCGCGAGCTCCTCGCCAAGCAAGTTGCTCTGGATCTCTCCGAAGATGAACGGTACC
AGCTTGAGAGGATGGAAGTGGCGAGTGCCAATGCCCTTTTATGCCCAATTTCTGGCTGTG
GTGCTCATCTAGATTGCCTGGAGAACTTTGAGGACCACTATCGCACCCGTCATACTGCTT
CATGCTCTGTATGTTGGAGAGTGTATCCAACTTCAAGGCTGCTGAGTATTCATATTTCTG
AGGCACATGATTCCTTTTTTCAAGCAAAAGTTGCCCGTGGTTTTCCAATGTATGAGTGTT
TGGTGGAGGGTTGTGGGGTGAAGTTGAAGAGCTACAAAAGTCGGCAGCAGCATCTTCTTG
ATAAGCACCAGTTTCCCAAGTCATTTGAATTCTTCAAAAAAGCACGCCCTTCGCAACGCC
AGCGGAACAAGAACCAGAAGCAACGGCAAACAGTTCACAAGGGAGACGATACAAGCGAAA
CACTAATGGATGTTGATGGGAAGAAGAGCTCAAGGTACATGAATTCCAGATATCGGCCAA
AGCAACATGATGGAAAAGAGTCAAAAGAAAATGAGCATAGTAGCTGTAAGGAGGCCAAGA
ACAACGAAATGGAGGTTGACAAGCAGGTTGATGAGCTTGCTTCGGCCGTATCAAGACTGA
GCACAGCGGATTCAACTCCTTCTAGCATAAGCTTTGGTCATCGTCGCTCTCGCGGTCTTG
CTTTTGTCCCTAGGTCGATTCGGCAAAACAAGCAGGTTTCTCAGACAGAACCAAAATGAC
AGCATTTGATACCATCTTTCTCTTCATTGCTGATCTCGGATGCATCAACAATCCTGAATG
TGCTGTTTCCTGTACCTGGACATTCACCGAATCCACTAATATACATTCTTGTAGTTGTAT
CACGAGATATGTCTTCTAGCTGGTTATCCTTGCTTATGGATGTACTGAGCTTCCTGTTAC
TGCCATGTAGTAGAACAATTTTTCTGAAGCGGCAAATATGAAGTGCAAAATACAAGACAG
TTCTTGTG
clustalw multiple alignements is not computed in this case