cluster # 2042

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Oryza sativa
cluster # 2042 cluster # 2042 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2042#0 length = 576 sequences # 2

consensusID : consensus_2042#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 576
fasta sequence

                              [AGCGCCGCAAATGGATGATACCTCGTGGCCACAAACAACACCACCATCGTTCATCTTTGTCGACTGGCTCGCTATGCTATCAGGTGAGGATACACACACTACTCTCATAGAAGCACACCATGCATGGGCTCGAATGAGTAGAGTAGCGTCCAATTAATGTGTCGACGCCGGCAACCCGCGGCACGTTGACCGGCACGGCGCCGTACGTACCCACGATGAGGTTGAGGTGATCTCGTCTCCCGCGTCATCGCTACCGCCACGGCTTCGCCCGTCACCACCGCCGCCTCGCAGGCCGCCGGACCTTCTCCCCTCCCACCTCGTCCTGCCGGGTGGCCTGCCCAGAGAGGAGAATAGTGAGAGAGAGGGAGAGGAGGGGGAGAGATGATGGATGTGTCATCTTGATATGTGGGGTTCATGTAGAGTCTCACGCTAACTCAGCTGCCATGTCGGATAAAATCGCGGTTAAAACCGTGCAAGGACCAAAAGTGATCAGGTTTTATAAATCGAGGG-ATGATATATATCTAGTTTTATGGTTGGACGATGATTTTATAATCCGATGATAAGTTGAGGGAAAAA]

[+] EMBL CF332974             [AGCGCCGCAAATGGATGATACCTCGTGGCCACAAACAACACCACCATCGTTCATCTTTGTCGACTGGCTCGCTATGCTATCAGGTGAGGATACACACACTACTCTCATAGAAGCACACCATGCATGGGCTCGAATGAGTAGAGTAGCGTCCAATTAATGTGTCGACGCCGGCAACCCGCGGCACGTTGACCGGCACGGCGCCGTACGTACCCACGATGAGGTTGAGGTGATCTCGTCTCCCGCGTCATCGCTACCGCCACGGCTTCGCCCGTCACCACCGCCGCCTCGCAGGCCGCCGGACCTTCTCCCCTCCCACCTCGTCCTGCCGGGTGGCCTGCCCAGAGAGGAGAATAGTGAGAGAGAGGGAGAGGAGGGGGAGAGATGATGGATGTGTCATCTTGATATGTGGGGTTCATGTAGAGTCTCACGCTAACTCAGCTGCCATGTCGGATAAAATCGCGGTTAAAACCGTGCAAGGACCAAAAGTGATCAGGTTTTATAAATCGAGGG ATGATATATATCTAGTTTTATGGTTGGACGATGATTTTATAATCCGATGATAAGTTGAGGGAAA  ]
[-] EMBL CF332975             [                                                         TGTCGACTGGCTCGCTATGCTATCAGGTGAGGATACACACACTACTCTCATAGAAGCACACCATGCATGGGCTCGAATGAGTAGAGTAGCGTCCAATTAATGTGTCGACGCCGGCAACCCGCGGCACGTTGACCGGCACGGCGCCGTACGTACCCACGATGAGGTTGAGGTGATCTCGTCTCCCGCGTCATCGCTACCGCCACGGCTTCGCCCGTCACCACCGCCGCCTCGCAGGCCGCCGGACCTTCTCCCCTCCCACCTCGTCCTGCCGGGTGGCCTGCCCAGAGAGGAGAATAGTGAGAGAGAGGGAGAGGAGGGGGAGAGATGAT GATGTGTCATCTTGATATGTGGGGTTCATGTAGAGTCTCACGCTAACTCAGCTGCCATGTCGGATAAAATCGCGGTTAAAACCGTGCAAGGACCAAAAGTGATCAGGTTTTATAAATCGAGGGAATGATATATATCTAGTTTTATGGTTGGACGATGATTTTATAATCCGATGATAAGTTGAGGGAAAAA]




>consensus_2042#0
AGCGCCGCAAATGGATGATACCTCGTGGCCACAAACAACACCACCATCGTTCATCTTTGT
CGACTGGCTCGCTATGCTATCAGGTGAGGATACACACACTACTCTCATAGAAGCACACCA
TGCATGGGCTCGAATGAGTAGAGTAGCGTCCAATTAATGTGTCGACGCCGGCAACCCGCG
GCACGTTGACCGGCACGGCGCCGTACGTACCCACGATGAGGTTGAGGTGATCTCGTCTCC
CGCGTCATCGCTACCGCCACGGCTTCGCCCGTCACCACCGCCGCCTCGCAGGCCGCCGGA
CCTTCTCCCCTCCCACCTCGTCCTGCCGGGTGGCCTGCCCAGAGAGGAGAATAGTGAGAG
AGAGGGAGAGGAGGGGGAGAGATGATGGATGTGTCATCTTGATATGTGGGGTTCATGTAG
AGTCTCACGCTAACTCAGCTGCCATGTCGGATAAAATCGCGGTTAAAACCGTGCAAGGAC
CAAAAGTGATCAGGTTTTATAAATCGAGGGATGATATATATCTAGTTTTATGGTTGGACG
ATGATTTTATAATCCGATGATAAGTTGAGGGAAAAA

clustalw multiple alignements is not computed in this case