Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 2066 cluster # 2066       Sequences # 2       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2066#0 length = 392 sequences # 2  
consensusID : consensus_2066#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 392
fasta sequence 
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCCGGGGATAAAATTACCAATAAAAATCCTTTTTGACCAATTGGCCCAAATATTTTTTACCAAGGGGTTGGGCCTATAAAAAACCCGGGGGCAACATTTACAAAAGCCTGCCCTTTAACCCTTGGGGGTACCCACCTTTGGCCCCACCCCCCCCCCTGGTGTTGGCCCCCCCCAAATGAAAAAAAAAAAAAACCGGACCCCCCAACCGGGAAAGGGGGAACCCATGCCAGGGGGGCCCATTTTAACCTTTAAAACTGCCCAAACCCAAAAAAACAAACCGGGCTCCCCTTTTTAAAACCCACAAAAGAACTTGGTGGGTTGCCCAAAAACTTA]

[+] EMBL CF335342             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCCGGGGATAAAATTACCAATAAAAATCCTTTTTGACCAATTGGCCCAAATATTTTTTACCAAGGGGTTGGGCCTATAAAAAACCCGGGGGCAACATTTACAAAAGCCTGCCCTTTAACCCTTGGGGGTACCCACCTTTGGCCCCACCCCCCCCCCTGGTGTTGGCCCCCCCCAAATGAAAAAAAAAAAAAACCGGACCCCCCAACCGGGAAAGGGGGAACCCATGCCAGGGGGGCCCATTTTAACCTTTAAAACTGCCCAAACCCAAAAAAACAAACCGGGCTCCCCTTTTTAAAACCCACAAAAGAACTTGGTGGGTTGCCCAAAAACTTA]
[+] EMBL CF301836             [            TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGCCGGGGTTAAAATTACAAATAAAAATCGGTTTTGACCAATTGGCCCAAATATTTTTTTCCAAGGGGTTGGGCCTATAA                                                                                                                                                                                                                                                              ]




>consensus_2066#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG
CCGGGGATAAAATTACCAATAAAAATCCTTTTTGACCAATTGGCCCAAATATTTTTTACC
AAGGGGTTGGGCCTATAAAAAACCCGGGGGCAACATTTACAAAAGCCTGCCCTTTAACCC
TTGGGGGTACCCACCTTTGGCCCCACCCCCCCCCCTGGTGTTGGCCCCCCCCAAATGAAA
AAAAAAAAAAACCGGACCCCCCAACCGGGAAAGGGGGAACCCATGCCAGGGGGGCCCATT
TTAACCTTTAAAACTGCCCAAACCCAAAAAAACAAACCGGGCTCCCCTTTTTAAAACCCA
CAAAAGAACTTGGTGGGTTGCCCAAAAACTTA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)