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Oryza sativa
cluster # 2137 cluster # 2137       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2137#0 length = 2043 sequences # 2  

consensusID : consensus_2137#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2043
fasta sequence
                              [CTCCTCTGCAAATCCGCGCGCGTGCTCGTCTTCTTCCTCTTCCTTCTCTCGCTCTCTCTCTCCCTCCTCGAGGCCGCGACGCGTACGACGGCAATGGAGGAAGGCCGCCGTGGCGACCGCGAGGGGAAGAGCGCGGCCGGGTGGACCGCCCTGTCGACGACGAAGACGACGCTGGAGGAGAAGCGGCGGCTGCAGGCCAACGGGAGCGTCGGCGGCGACGCCGGGACGAGTGGCTTCCGGAGGATCGTGCGGCTGTTCTTCGCCTGCATGGTGGCCGGCGGCATCCAGTACGGCTGGGCGCTGCAGCTGTCCCTCCTCTCGCCCTACTCTCAGACTCTCGGGATTTCCCACTCGTACGTTTCCCTGACATGGATCTGCGGACCAATCGCTGGATTTGTGGTGCAACCCATCGTCGGTTACTACAGTGACAGATGCACCATGAAGATGGGCCGCAGGAGGCCTTTCATCCTTGTTGGCTGCCTCATCATCTGCATCTCCGTCATGATCATCGGTTTCTCGGCGGACATTGGACGTCACCTCGGTGACACCAAAGAGCACTGCAGCACGTACACGGGTCCTCGCTGGTCGGCCGCCATGGTGTACATTGTTGGCTTTTGGTTCCTTGACTTCGCTAACAACACTGTCCAGGGGCCGGCTCGTGCCATGATGGCTGATCTGTCAGCTGGACACCATGGCCCCAACGTCGGCCAGTCGATCTTCTCCCTGTGGATGGCTATCGGCAGCGTCCTCGGCTACTTGTCCGGCGCCAACGGGAAATGGCACGAATGGTTCCCATGGCTGAAAACCGCGGCGTGCTGCGACGCCTGCGCGAACCTCAAGGGCGCCTTCTTCACCGCCGTGCTACTCATCGTCGTCAGCATGACGGTGACGATGTACCTCGCCGACGAGATGCCGCTGGACAAGCAGGACGTCGACACCTCCGGCGGCGGCGGGTGCGCCGTGTTCGTCGACCTCTTCAAGAGCCTCAGGAACCTGCCCCCCGCCATGTTCAAAGTGCTCGCCGTCACGGCCGTCACCTGGCTGTCGTGGTTCCCCTTCATCCAGTACAACACCGACTGGATGGGACGGGAGATCTACCACGGCGAGCCGCAGGGCACGGCGGCCAAGGCCGACGTGTACGACGCCGGCGTCAGGGAGGGCGCCATGGGCCTGCTCTTCTGCTCCGTCGCGCTCGGCGTCACCTCCTTCGTGATCCCCAAGCTCTGCCGCAGGCTGACGTCCAAGGTGGTCTGGTCCATCAGCAACTTCCTCGTGTTCGCGCTCATGGCGGTGATGGTCGCCGTCGGCATGGTGTCCATGAGAGGGTACCGGCCGTCGCTCGCCGCCGGACTCACCGGGCCGGACCCGACGCTCAAGGCCGTCGCGCTCGTCGTCTTCGCGCTCATCGGCATCCCCCAGGCCGTGTTGTTCAGTGTTCCATGGGCCGTCGCTTCTGAGGTTACTGCTGAGGAGGGTGGCGGCCAAGGTCTTGCCATTGGTGTCCTCAACATTGCCATTGTTGTCCCACAGCTGGTGATCGCGCTCACCGCCGGCCCGATCGACGGCGCCTTCAACAAGGGGAACACGCCGGCGTTCGGCATCGGCGGCGCCTTCGCCTTCATCTGTGGAGTCCTTGCGCTCATCTGGCTACCAAAGACAAGGGGTGTGTCCAACGCCGCCGTCGTCGCCGGCGGTCACTAGTGCGAAACTCCATCAAAGGCACCACCCGGCCGGCCTATCGCCGATCGATGTGCCATGAATTGGGAGTGCATGAGACTCTGAAAATTTTCGCTACAAACTCAATGTTGATTCGTTCGCTGTGTTGTCCTTAGTTTTTTTTTTCCCTACTCGTTCATGTCCATGTGAGAGTGTTAAGCCGTAGAGGACAAACAGGAATTTTCCTGGCTGCCTTGTTTATTGGCAGATCTCAGGAAACCCAAATATTTTAAGATGAAGAATTGTTCTCTCTGCTTTAGAGTGGTAGCAGCTTCTGAACAACGAG-AAAAAAAAAAGAAGACATTTGCATGACAAAAAAAAAAAAAA]

[+] EMBL AK073105             [CTCCTCTGCAAATCCGCGCGCGTGCTCGTCTTCTTCCTCTTCCTTCTCTCGCTCTCTCTCTCCCTCCTCGAGGCCGCGACGCGTACGACGGCAATGGAGGAAGGCCGCCGTGGCGACCGCGAGGGGAAGAGCGCGGCCGGGTGGACCGCCCTGTCGACGACGAAGACGACGCTGGAGGAGAAGCGGCGGCTGCAGGCCAACGGGAGCGTCGGCGGCGACGCCGGGACGAGTGGCTTCCGGAGGATCGTGCGGCTGTTCTTCGCCTGCATGGTGGCCGGCGGCATCCAGTACGGCTGGGCGCTGCAGCTGTCCCTCCTCTCGCCCTACTCTCAGACTCTCGGGATTTCCCACTCGTACGTTTCCCTGACATGGATCTGCGGACCAATCGCTGGATTTGTGGTGCAACCCATCGTCGGTTACTACAGTGACAGATGCACCATGAAGATGGGCCGCAGGAGGCCTTTCATCCTTGTTGGCTGCCTCATCATCTGCATCTCCGTCATGATCATCGGTTTCTCGGCGGACATTGGACGTCACCTCGGTGACACCAAAGAGCACTGCAGCACGTACACGGGTCCTCGCTGGTCGGCCGCCATGGTGTACATTGTTGGCTTTTGGTTCCTTGACTTCGCTAACAACACTGTCCAGGGGCCGGCTCGTGCCATGATGGCTGATCTGTCAGCTGGACACCATGGCCCCAACGTCGGCCAGTCGATCTTCTCCCTGTGGATGGCTATCGGCAGCGTCCTCGGCTACTTGTCCGGCGCCAACGGGAAATGGCACGAATGGTTCCCATGGCTGAAAACCGCGGCGTGCTGCGACGCCTGCGCGAACCTCAAGGGCGCCTTCTTCACCGCCGTGCTACTCATCGTCGTCAGCATGACGGTGACGATGTACCTCGCCGACGAGATGCCGCTGGACAAGCAGGACGTCGACACCTCCGGCGGCGGCGGGTGCGCCGTGTTCGTCGACCTCTTCAAGAGCCTCAGGAACCTGCCCCCCGCCATGTTCAAAGTGCTCGCCGTCACGGCCGTCACCTGGCTGTCGTGGTTCCCCTTCATCCAGTACAACACCGACTGGATGGGACGGGAGATCTACCACGGCGAGCCGCAGGGCACGGCGGCCAAGGCCGACGTGTACGACGCCGGCGTCAGGGAGGGCGCCATGGGCCTGCTCTTCTGCTCCGTCGCGCTCGGCGTCACCTCCTTCGTGATCCCCAAGCTCTGCCGCAGGCTGACGTCCAAGGTGGTCTGGTCCATCAGCAACTTCCTCGTGTTCGCGCTCATGGCGGTGATGGTCGCCGTCGGCATGGTGTCCATGAGAGGGTACCGGCCGTCGCTCGCCGCCGGACTCACCGGGCCGGACCCGACGCTCAAGGCCGTCGCGCTCGTCGTCTTCGCGCTCATCGGCATCCCCCAGGCCGTGTTGTTCAGTGTTCCATGGGCCGTCGCTTCTGAGGTTACTGCTGAGGAGGGTGGCGGCCAAGGTCTTGCCATTGGTGTCCTCAACATTGCCATTGTTGTCCCACAGCTGGTGATCGCGCTCACCGCCGGCCCGATCGACGGCGCCTTCAACAAGGGGAACACGCCGGCGTTCGGCATCGGCGGCGCCTTCGCCTTCATCTGTGGAGTCCTTGCGCTCATCTGGCTACCAAAGACAAGGGGTGTGTCCAACGCCGCCGTCGTCGCCGGCGGTCACTAGTGCGAAACTCCATCAAAGGCACCACCCGGCCGGCCTATCGCCGATCGATGTGCCATGAATTGGGAGTGCATGAGACTCTGAAAATTTTCGCTACAAACTCAATGTTGATTCGTTCGCTGTGTTGTCCTTAGTTTTTTTTTTCCCTACTCGTTCATGTCCATGTGAGAGTGTTAAGCCGTAGAGGACAAACAGGAATTTTCCTGGCTGCCTTGTTTATTGGCAGATCTCAGGAAACCCAAATATTTTAAGATGAAGAATTGTTCTCTCTGCTTTAGAGTGGTAGCAGCTTCTGAACAACGAG AAAAAAAAAAGAAGA                          ]
[+] EMBL AB091674             [                                                                                           CAATGGAGGAAGGCCGCCGTGGCGACCGCGAGGGGAAGAGCGCGGCCGGGTGGACCGCCCTGTCGACGACGAAGACGATGCTGGAGGAGAAGCGGCGGCTGCAGGCCAACGGGAGCGTCGGCGGCGACGCCGGGACGAGTGGCTTCCGGAGGATCGTGCGGCTGTTCTTCGCCTGCATGGTGGCCGGCGGCATCCAGTACGGCTGGGCGCTGCAGCTGTCCCTCCTCTCGCCCTACTCTCAGACTCTCGGGATTTCCCACTCGTACGTTTCCCTGACATGGATCTGCGGACCAATCGCTGGATTTGTGGTGCAACCCATCGTCGGTTACTACAGTGACAGATGCACCATGAAGATGGGCCGCAGGAGGCCTTTCATCCTTGTTGGCTGCCTCATCATCTGCATCTCCGTCATGATCATCGGTTTCTCGGCGGACATTGGACGTCACCTCGGTGACACCAAAGAGCACTGCAGCACGTACACGGGTCCTCGCTGGTCGGCCGCCATGGTGTACATTGTTGGCTTCTGGTTCCTTGACTTCGCTAACAACACTGTCCAGGGGCCGGCTCGTGCCATGATGGCTGATCTGTCAGCTGGACACCATGGCCCCAACGTCGGCCAGTCGATCTTCTCCCTGTGGATGGCTATCGGCAGCGTCCTCGGCTACTTGTCCGGCGCCGACGGGAAATGGCACGAATGGTTCCCATGGCTGAAAACCGCGGCGTGCTGCGACGCCTGCGCGAACCTCAAGGGCGCCTTCTTCACCGCCGTGCTACTCATCGTCGTCAGCATGACGGTGACGATGTACCTCGCCGACGAGATGCCGCTGGACAAGCAGGACGTCGACACCTCCGGCGGCGGCGGTTGCGCCGTGTTCGTCGACCTCTTCAAGAGCCTCAGGAACCTGCCCCCCGCCATGTTCAAAGTGCTCGCCGTCACGGCCGTCACCTGGCTGTCGTGGTTCCCCTTCATCCAGTACAACACCGACTGGATGGGACGGGAGATCTACCACGGCGAGCCGCAGGGCACGGCGGCCAAGGCCGACGTGTACGACGCCGGCGTCAGGGAGGGCGCCATGGGCCTGCTCTTCTGCTCCGTCGCGCTCGGCGTCACCTCCTTCGTGATCCCCAAGCTCTGCCGCAGGCTGACGTCCAAGGTGGTCTGGTCCATCAGCAACTTCCTCGTGTTCGCGCTCATGGCGGTGATGGTCGCCGTCGGCATGGTGTCCATGAGAGGGTACCGGCCGTCGCTCGCCGCCGGACTCACCGGGCCGGACCCGACGCTCAAGGCCGTCGCGCTCGTCGTCTTCGCGCTCATCGGCATCCCCCAGGCCGTGTTGTTCAGTGTTCCATGGGCCGTCGCTTCTGAGGTTACTGCTGAGGAGGGTGGCGGCCAAGGTCTTGCCATTGGTGTCCTCAACATTGCCATTGTTGTCCCACAGCTGGTGATCGCGCTCACCGCCGGCCCGATCGACGGCGCCTTCAACAAGGGGAACACGCCGGCGTTCGGCATCGGCGGCGCCTTCGCCTTCATCTGTGGAGTCCTTGCGCTCATCTGGCTACCAAAGACAAGGGGTGTGTCCAACGCCGCCGTCGTCGCCGGCGGTCACTAGTGCGAAACTCCATCAAAGGCACCACCCGGCCGGCCTATCGCCGATCGATGTGCCATGAATTGGGAGTGCATGAGACTCTGAAAATTTTCGCTACAAACTCAATGTTGATTCGTTCGCTGTGTTGTCGTTAGTTTTTTTTTTCCCTACTCGTTCATGTCCATGTGAGAGTGTTAAGCCGTAGAGGACAAACAGGAATTTTCCTGGCTGCCTTGTTTATTGGCAGATCTCAGGAAACCCAAATATTTTAAGATGAAGAATTGTTCTCCCTGCTTTAGAGTGGTAGCAGCTTCTGAACAACGAGAAAAAAAAAAAGAAGACATTTGCATGACAAAAAAAAAAAAAA]


>consensus_2137#0 CTCCTCTGCAAATCCGCGCGCGTGCTCGTCTTCTTCCTCTTCCTTCTCTCGCTCTCTCTC TCCCTCCTCGAGGCCGCGACGCGTACGACGGCAATGGAGGAAGGCCGCCGTGGCGACCGC GAGGGGAAGAGCGCGGCCGGGTGGACCGCCCTGTCGACGACGAAGACGACGCTGGAGGAG AAGCGGCGGCTGCAGGCCAACGGGAGCGTCGGCGGCGACGCCGGGACGAGTGGCTTCCGG AGGATCGTGCGGCTGTTCTTCGCCTGCATGGTGGCCGGCGGCATCCAGTACGGCTGGGCG CTGCAGCTGTCCCTCCTCTCGCCCTACTCTCAGACTCTCGGGATTTCCCACTCGTACGTT TCCCTGACATGGATCTGCGGACCAATCGCTGGATTTGTGGTGCAACCCATCGTCGGTTAC TACAGTGACAGATGCACCATGAAGATGGGCCGCAGGAGGCCTTTCATCCTTGTTGGCTGC CTCATCATCTGCATCTCCGTCATGATCATCGGTTTCTCGGCGGACATTGGACGTCACCTC GGTGACACCAAAGAGCACTGCAGCACGTACACGGGTCCTCGCTGGTCGGCCGCCATGGTG TACATTGTTGGCTTTTGGTTCCTTGACTTCGCTAACAACACTGTCCAGGGGCCGGCTCGT GCCATGATGGCTGATCTGTCAGCTGGACACCATGGCCCCAACGTCGGCCAGTCGATCTTC TCCCTGTGGATGGCTATCGGCAGCGTCCTCGGCTACTTGTCCGGCGCCAACGGGAAATGG CACGAATGGTTCCCATGGCTGAAAACCGCGGCGTGCTGCGACGCCTGCGCGAACCTCAAG GGCGCCTTCTTCACCGCCGTGCTACTCATCGTCGTCAGCATGACGGTGACGATGTACCTC GCCGACGAGATGCCGCTGGACAAGCAGGACGTCGACACCTCCGGCGGCGGCGGGTGCGCC GTGTTCGTCGACCTCTTCAAGAGCCTCAGGAACCTGCCCCCCGCCATGTTCAAAGTGCTC GCCGTCACGGCCGTCACCTGGCTGTCGTGGTTCCCCTTCATCCAGTACAACACCGACTGG ATGGGACGGGAGATCTACCACGGCGAGCCGCAGGGCACGGCGGCCAAGGCCGACGTGTAC GACGCCGGCGTCAGGGAGGGCGCCATGGGCCTGCTCTTCTGCTCCGTCGCGCTCGGCGTC ACCTCCTTCGTGATCCCCAAGCTCTGCCGCAGGCTGACGTCCAAGGTGGTCTGGTCCATC AGCAACTTCCTCGTGTTCGCGCTCATGGCGGTGATGGTCGCCGTCGGCATGGTGTCCATG AGAGGGTACCGGCCGTCGCTCGCCGCCGGACTCACCGGGCCGGACCCGACGCTCAAGGCC GTCGCGCTCGTCGTCTTCGCGCTCATCGGCATCCCCCAGGCCGTGTTGTTCAGTGTTCCA TGGGCCGTCGCTTCTGAGGTTACTGCTGAGGAGGGTGGCGGCCAAGGTCTTGCCATTGGT GTCCTCAACATTGCCATTGTTGTCCCACAGCTGGTGATCGCGCTCACCGCCGGCCCGATC GACGGCGCCTTCAACAAGGGGAACACGCCGGCGTTCGGCATCGGCGGCGCCTTCGCCTTC ATCTGTGGAGTCCTTGCGCTCATCTGGCTACCAAAGACAAGGGGTGTGTCCAACGCCGCC GTCGTCGCCGGCGGTCACTAGTGCGAAACTCCATCAAAGGCACCACCCGGCCGGCCTATC GCCGATCGATGTGCCATGAATTGGGAGTGCATGAGACTCTGAAAATTTTCGCTACAAACT CAATGTTGATTCGTTCGCTGTGTTGTCCTTAGTTTTTTTTTTCCCTACTCGTTCATGTCC ATGTGAGAGTGTTAAGCCGTAGAGGACAAACAGGAATTTTCCTGGCTGCCTTGTTTATTG GCAGATCTCAGGAAACCCAAATATTTTAAGATGAAGAATTGTTCTCTCTGCTTTAGAGTG GTAGCAGCTTCTGAACAACGAGAAAAAAAAAAGAAGACATTTGCATGACAAAAAAAAAAA AAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)