cluster # 2162

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Oryza sativa
cluster # 2162 cluster # 2162 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2162#0 length = 655 sequences # 2

consensusID : consensus_2162#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 655
fasta sequence

                              [CCAGTACTAAGTGTCCAGCAGCTGTACAAAATATGCACACAGTACTGGGATGACAAATACAACACAGAGAGTGTAT-CTGAAGA-GGTACTTGATGAAAT-GAGGACGCTGATAACGAAGGAATCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATATCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCACCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACCATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCTGTCCTTGCGGTTCCTTGTGTAAATTATTCTTT-TTGGTAGGTAGGGGTTCCTTTTCCCCTATGTTTTCGTTGGCT-TGGGTTGGGA-AAATTATTT-GCCCTCCCA-AAAA-TGTGTCCAAAATATGAATATA-GAAATT----CTTAGTTTTT-TTGTA-GGCATGGTA-GGGTTGTAGACACTCAAGCGCCACGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATATCGATTCCATTTTATTGTACAGAACTACTGGAAAATATCAATAAGTTAAATCATT]

[+] EMBL AK062923             [CCAGTACTAAGTGTCCAGCAGCTGTACAAAATATGCACACAGTACTGGGATGACAAATACAACACAGAGAGTGTAT CTGAAGA GGTACTTGATGAAAT GAGGACGCTGATAACGAAGGAATCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATATCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCACCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACCATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCTGTCCTTGCGGTTCCTTGTGTAAATTATTCTTT TTGGTAGGTAGGGGTTCCTTTTCCCCTATGTTTTCGTTGGCT TGGGTTGGGA AAATTATTT GCCCTCCCA AAAA TGTGTCCAAAATATGAATATA GAAATT    CTTAGTTTTT TTGTA GGCATGGTA GGGTTGTAGACACTCAAGCGCCACGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATATCGATTCCATTTTATTGTACAGAACTACTGGAAAATATCAATAAGTTAAATCATT]
[+] EMBL BQ906699             [                                                                  GAGAGTGTATCCTGAAGACGGTACTTGATGAAATCGAGGAC CTGATAACGAAGGAATCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATATCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCACCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACCATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCTGTCCTTGCGGTTCCTTGTGTAAATTATTCTTTCTTGGTAGGTAGGGGTTCCTTTTCCCCTATGTTTTCGTTGGCTATGGGTTGGGACAAATTATTTCGCCCTCCCAGAAAATTGTGTCCAAAATATGAATATACGAAATTCTTCCTTAGTTTTTCTTGTACGGCATGGTAGGGGTTGTAGACACTCGAGCGCCACGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATATCGATTCCATTTTATTGTACAGAAaaaaa                          ]




>consensus_2162#0
CCAGTACTAAGTGTCCAGCAGCTGTACAAAATATGCACACAGTACTGGGATGACAAATAC
AACACAGAGAGTGTATCTGAAGAGGTACTTGATGAAATGAGGACGCTGATAACGAAGGAA
TCAGGCCAAGATAGTTCAGAGAATACCTTTTTATTGGATGATGAAATAAGCATGCCCATA
TCACTTGAGGAGATTGGGGATTCTATGGATTCTAAAGAATTTCAGCACATAGCCCCACCA
CCAGAACTTGTTGCAATCCCCGCATTCCAATTCTTGAAGAGCTGAGAGCCCTCAAAGACC
ATATACATACATGCTGCACAGCCAGACCTCTTTTTTGTACCATCGATGTTGTAGATTTCT
GTCCTTGCGGTTCCTTGTGTAAATTATTCTTTTTGGTAGGTAGGGGTTCCTTTTCCCCTA
TGTTTTCGTTGGCTTGGGTTGGGAAAATTATTTGCCCTCCCAAAAATGTGTCCAAAATAT
GAATATAGAAATTCTTAGTTTTTTTGTAGGCATGGTAGGGTTGTAGACACTCAAGCGCCA
CGCTTGGGTTACCTTATCCTGCACAACTTGTAGTTAGTAACATTTTTTTAAAAAGCCATA
TCGATTCCATTTTATTGTACAGAACTACTGGAAAATATCAATAAGTTAAATCATT

clustalw multiple alignements is not computed in this case