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Oryza sativa
cluster # 2167 cluster # 2167       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2167#0 length = 1730 sequences # 2  

consensusID : consensus_2167#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1730
fasta sequence
                              [CTTCCACCGAAGTACCGAACACCCCGTCCCCATCATCACCTCACCATGGCGGCAGAGGGAGAGGAGGCGAGGAGCCCGCACGTCGTGCTCTTCCCCTTCCTCGCGCACGGCCACATCCCGGCCTTCCTCCGCCTCGCCGGCCACCTCCAGACGCTCCGCCCGGGCCTCGCCGTCACGCTCGTCTCCACCCCACGCCTCCTCGGCTCCCTCTCCCTCCCGGCCACCTCCCCTCCGATCCGGCTCCACGCGCTCCCCTTCGCGCCCGCCGACCACGGTCTGCCCGACGGCGCCGAGTCCCTCGCCGACCTCCACGTCCACCAGTTCATCACCCTCTTCCGGGCCTCCGAGTCCCTCCGCCCGGCCTTCGATGGCTTCGTCGCTGGCATCCGGCCCCCCGTCTGCGTCATCGCCGACTCCTTCTTCGCGTGGACGGCCGACGTCGCGCGCGCGCGGGGCGCGTCCCACGCCGTGTTCCTCCCCGGAGGCGCCTTCGGCCACGCCGTCTTCTTCTCCGTGTGGGAGCACCTCCCGCACACCCTCACGGCCGGCGGCGACGAGTTCCCGCTGCTGCCCGACTTCCCCGACGTCGTCCTCCACCGCACCCAGATCCCGCAGTACATGCTCGCCGCGACGGGGGCGGACCCCTGGACGGCCTTCTTCCGGCGGGTCATCCCGTGCTGCCGCAAGACCGACGCCGTGCTCGTCAACACCATCCAGGAACTGGAGACCTCCGGGCTAGACATGCTCAGAGCGAGCTTCGGCGTCCAGACATGGGCGATCGGGCCGATCCTCGCGGCGCCGGATCCTTCGAAATCGCAGGACGACGACGACACCAGCATCATCCGGTGGCTGGACGCGCACCCGCGGCGCTCGGTGCTGTACATCTCGTTCGGGTCGCAGAACAGCATCAGCATCCGTCAGATGGCGGAGCTGGCGCTGGGGCTGGAGGCGAGCGGGCGGCCGTTCGTCTGGGCCGTCCGGCCGCCGGTGGGGTTCGACCCCAAGGACGGATTCGATCCCGGGTGGCTCCCCGCCGGATTCGAGGACCGGATGGCGCGCGCAGGCAGGGGGCTGGTGGTGCGCGGGTGGGCGCCGCAGGCGCGGATCCTGGCGCACCCGTCCACGGGCGCGTTCCTGACACACTGCGGGTGGAACTCCATCCTCGAGAGCCTCCGCCACGGCGTGCCGCTGCTCGGGTGGCCGGTGGGGGCCGAGCAGTTCTTCAACGCGATGGTGGTGGTGGAGTGGGGGGTGTGCGTGGAGGTGGCGCGCGGGAACCTGGAGAGCTCGGCGGTGGAGAGTGGGGAGGTGGCCGAGGCCGTGGGGGCGGTGATGGGGGAGACGGAGAAGGGCGAGGCGATGAGGAGGAAGGCGGGGGAGATCGCGCGCGCGATGGCGGCGGCGTGGGAGGGTCCGGCCGGGTCGTCGGCGGCGAGCTTGGAACGGTTTCTCAGATGCGTTGAGGCATCGGCGCTCCGAGATTCGTGCTTGGGTGCTTCGTGATTGGTGCAGCGCGAAAACCA-CCCGTGTAAATGTTGATGTGAATTCTCTTTCTAATTTCTGATTTCTCTCGGTTTAGATATTCTGTTAGACGTGTATATTTATCTCGGTTTGGACGTAGTATGTTCATAGTAAGAATCACAACTCAAGGGGAAGATTTTGTGGTGTTAGAGTAGGGGAAAGAACAAATNCCTCNCCTAAAGAAAAATAACCCATGTTAGAAAAAAAAA]

[+] EMBL AK068040             [CTTCCACCGAAGTACCGAACACCCCGTCCCCATCATCACCTCACCATGGCGGCAGAGGGAGAGGAGGCGAGGAGCCCGCACGTCGTGCTCTTCCCCTTCCTCGCGCACGGCCACATCCCGGCCTTCCTCCGCCTCGCCGGCCACCTCCAGACGCTCCGCCCGGGCCTCGCCGTCACGCTCGTCTCCACCCCACGCCTCCTCGGCTCCCTCTCCCTCCCGGCCACCTCCCCTCCGATCCGGCTCCACGCGCTCCCCTTCGCGCCCGCCGACCACGGTCTGCCCGACGGCGCCGAGTCCCTCGCCGACCTCCACGTCCACCAGTTCATCACCCTCTTCCGGGCCTCCGAGTCCCTCCGCCCGGCCTTCGATGGCTTCGTCGCTGGCATCCGGCCCCCCGTCTGCGTCATCGCCGACTCCTTCTTCGCGTGGACGGCCGACGTCGCGCGCGCGCGGGGCGCGTCCCACGCCGTGTTCCTCCCCGGAGGCGCCTTCGGCCACGCCGTCTTCTTCTCCGTGTGGGAGCACCTCCCGCACACCCTCACGGCCGGCGGCGACGAGTTCCCGCTGCTGCCCGACTTCCCCGACGTCGTCCTCCACCGCACCCAGATCCCGCAGTACATGCTCGCCGCGACGGGGGCGGACCCCTGGACGGCCTTCTTCCGGCGGGTCATCCCGTGCTGCCGCAAGACCGACGCCGTGCTCGTCAACACCATCCAGGAACTGGAGACCTCCGGGCTAGACATGCTCAGAGCGAGCTTCGGCGTCCAGACATGGGCGATCGGGCCGATCCTCGCGGCGCCGGATCCTTCGAAATCGCAGGACGACGACGACACCAGCATCATCCGGTGGCTGGACGCGCACCCGCGGCGCTCGGTGCTGTACATCTCGTTCGGGTCGCAGAACAGCATCAGCATCCGTCAGATGGCGGAGCTGGCGCTGGGGCTGGAGGCGAGCGGGCGGCCGTTCGTCTGGGCCGTCCGGCCGCCGGTGGGGTTCGACCCCAAGGACGGATTCGATCCCGGGTGGCTCCCCGCCGGATTCGAGGACCGGATGGCGCGCGCAGGCAGGGGGCTGGTGGTGCGCGGGTGGGCGCCGCAGGCGCGGATCCTGGCGCACCCGTCCACGGGCGCGTTCCTGACACACTGCGGGTGGAACTCCATCCTCGAGAGCCTCCGCCACGGCGTGCCGCTGCTCGGGTGGCCGGTGGGGGCCGAGCAGTTCTTCAACGCGATGGTGGTGGTGGAGTGGGGGGTGTGCGTGGAGGTGGCGCGCGGGAACCTGGAGAGCTCGGCGGTGGAGAGTGGGGAGGTGGCCGAGGCCGTGGGGGCGGTGATGGGGGAGACGGAGAAGGGCGAGGCGATGAGGAGGAAGGCGGGGGAGATCGCGCGCGCGATGGCGGCGGCGTGGGAGGGTCCGGCCGGGTCGTCGGCGGCGAGCTTGGAACGGTTTCTCAGATGCGTTGAGGCATCGGCGCTCCGAGATTCGTGCTTGGGTGCTTCGTGATTGGTGCAGCGCGAAAACCA CCCGTGTAAATGTTGATGTGAATTCTCTTTCTAATTTCTGATTTCTCTCGGTTTAGATATTCTGTTAGACGTGTATATTTATCTCGGTTTGGACGTAGTATGTTCATAGTAAGA                                                                                             ]
[+] EMBL BQ906603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGGTCCGGCCGGGTCGTCGGCGGCGAGCTTGGAACGGTTTCTCAGATGCGTTGAGGCATCGGCGCTCCGAGATTCGTGCTTGGGTGCTTCGTGATTGGTGCAGCGCGAAAACCACCCCGTGTCAATGTTGATGTGAATTCTCTTTCTAATTTCTGATTTCTCTCGGTTTAGATATTCTGTTAGACGTGTATATTTATCTCGGTTTGGACGTAGTATGTTCATAGTAAGAATCACAACTCAAGGGGAAGATTTTGTGGTGTTAGAGTAGGGGAAAGAACAAATNCCTCNCCTAAAGAAAAATAACCCATGTTAGAAAAAAAAA]


>consensus_2167#0 CTTCCACCGAAGTACCGAACACCCCGTCCCCATCATCACCTCACCATGGCGGCAGAGGGA GAGGAGGCGAGGAGCCCGCACGTCGTGCTCTTCCCCTTCCTCGCGCACGGCCACATCCCG GCCTTCCTCCGCCTCGCCGGCCACCTCCAGACGCTCCGCCCGGGCCTCGCCGTCACGCTC GTCTCCACCCCACGCCTCCTCGGCTCCCTCTCCCTCCCGGCCACCTCCCCTCCGATCCGG CTCCACGCGCTCCCCTTCGCGCCCGCCGACCACGGTCTGCCCGACGGCGCCGAGTCCCTC GCCGACCTCCACGTCCACCAGTTCATCACCCTCTTCCGGGCCTCCGAGTCCCTCCGCCCG GCCTTCGATGGCTTCGTCGCTGGCATCCGGCCCCCCGTCTGCGTCATCGCCGACTCCTTC TTCGCGTGGACGGCCGACGTCGCGCGCGCGCGGGGCGCGTCCCACGCCGTGTTCCTCCCC GGAGGCGCCTTCGGCCACGCCGTCTTCTTCTCCGTGTGGGAGCACCTCCCGCACACCCTC ACGGCCGGCGGCGACGAGTTCCCGCTGCTGCCCGACTTCCCCGACGTCGTCCTCCACCGC ACCCAGATCCCGCAGTACATGCTCGCCGCGACGGGGGCGGACCCCTGGACGGCCTTCTTC CGGCGGGTCATCCCGTGCTGCCGCAAGACCGACGCCGTGCTCGTCAACACCATCCAGGAA CTGGAGACCTCCGGGCTAGACATGCTCAGAGCGAGCTTCGGCGTCCAGACATGGGCGATC GGGCCGATCCTCGCGGCGCCGGATCCTTCGAAATCGCAGGACGACGACGACACCAGCATC ATCCGGTGGCTGGACGCGCACCCGCGGCGCTCGGTGCTGTACATCTCGTTCGGGTCGCAG AACAGCATCAGCATCCGTCAGATGGCGGAGCTGGCGCTGGGGCTGGAGGCGAGCGGGCGG CCGTTCGTCTGGGCCGTCCGGCCGCCGGTGGGGTTCGACCCCAAGGACGGATTCGATCCC GGGTGGCTCCCCGCCGGATTCGAGGACCGGATGGCGCGCGCAGGCAGGGGGCTGGTGGTG CGCGGGTGGGCGCCGCAGGCGCGGATCCTGGCGCACCCGTCCACGGGCGCGTTCCTGACA CACTGCGGGTGGAACTCCATCCTCGAGAGCCTCCGCCACGGCGTGCCGCTGCTCGGGTGG CCGGTGGGGGCCGAGCAGTTCTTCAACGCGATGGTGGTGGTGGAGTGGGGGGTGTGCGTG GAGGTGGCGCGCGGGAACCTGGAGAGCTCGGCGGTGGAGAGTGGGGAGGTGGCCGAGGCC GTGGGGGCGGTGATGGGGGAGACGGAGAAGGGCGAGGCGATGAGGAGGAAGGCGGGGGAG ATCGCGCGCGCGATGGCGGCGGCGTGGGAGGGTCCGGCCGGGTCGTCGGCGGCGAGCTTG GAACGGTTTCTCAGATGCGTTGAGGCATCGGCGCTCCGAGATTCGTGCTTGGGTGCTTCG TGATTGGTGCAGCGCGAAAACCACCCGTGTAAATGTTGATGTGAATTCTCTTTCTAATTT CTGATTTCTCTCGGTTTAGATATTCTGTTAGACGTGTATATTTATCTCGGTTTGGACGTA GTATGTTCATAGTAAGAATCACAACTCAAGGGGAAGATTTTGTGGTGTTAGAGTAGGGGA AAGAACAAATNCCTCNCCTAAAGAAAAATAACCCATGTTAGAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)