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Oryza sativa
cluster # 219 cluster # 219       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_219#0 length = 2403 sequences # 1  
consensus_219#1 length = 1823 sequences # 1  

consensusID : consensus_219#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2403
fasta sequence
                              [GGCGGGTCTCATGGGATTTCATCTATGCCGGCCGTCGGAATCAAACGAGGGTCGAAGGACCATTCGATTCATTAAGGGGGACGGCCCATTTGTAAGGCGGGGGCCCTGATGGACGACATCCCCCGGCCTCGATTCTTTTGCATAGTCTGGGGGCCGGCCGCAGCAGAGCTGCGGGGCATAGCGGCACCCTCGCTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTGTGAAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTTAGCTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTTGACAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCCACGCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCGTGGAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACGAAGATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTACTACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCGGAACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAGGGCTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGAGCAGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTCATTCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGAAAGGGTCGGTCAATAGCATAGCTATTTTTTTTTCTCCTTTCGAAGGAAAGGCCTTCGCATTCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCTGACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATTGCCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCCAATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGACCGGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAAGTAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTGGCGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAAACAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTGGTTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTTAAGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTCGGATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAGTGCAACATGGCAAATTTCATTGAGAGGAATTAGCAAAGAAAAGAAATCTTCTTTCTCCGGGCCGGAGTAAATAGATCTGGTTTCAAGTAAAGCTGTAGGTAGATAGAGTTCAAGAACTTCCAAATAAAAGTTATGTATTATTCAGCAAATCATAATTACAATGTTATCCTGAGAGTGCTTGATATAAATACTATCAAAATTGACTTTTTCAATCACTAACTCAATGAATTGTATCTCAAAAAGGCAAACTTAGAACAAATTCAGTTCATAAGTTCTGTTTTTCTTTTTCCTCTCCATTACTTCTGTCTCCGGACGCATAGCTTTATTTAGTCTCCAGCCTTCTTGCTATAGAGCAGAAACCTGTCCTCATCTGCGTATCACATCTGCCTTTTGTCCTATTTGATTCTCATAGGGCTAGCCAATGAATGGTCCAAGAAAAGAAAGAAGGAAACTTCTTATATAGAGAGAACGGGTCAATAAATAGGTGCATGGCCCGCCCATCAAGAAGAACTTCCTCCACATTCTCTTTGTCTGATAGCGGCGGCAAGAATTGACATAGAAAAGCCAGCCGAGGACGGCGAGTTCATTTTTCTATTATAGCTCTTTCTCACCTCTCTGGTACTGATGCACTTTTTCCAACATATTCCTGATTCGCTTTTCACACGGCTTAGTTAATTCTTGACTTTACCGTTGCTAAACCATATTCTATAGGCCTCACTCAGTTCTGTATAGATTAAGTGCAATTCAATTCGTTAATGACCTCGCTTTGCTTTCTGTCTATCCA]

[+] EMBL AK063354             [GGCGGGTCTCATGGGATTTCATCTATGCCGGCCGTCGGAATCAAACGAGGGTCGAAGGACCATTCGATTCATTAAGGGGGACGGCCCATTTGTAAGGCGGGGGCCCTGATGGACGACATCCCCCGGCCTCGATTCTTTTGCATAGTCTGGGGGCCGGCCGCAGCAGAGCTGCGGGGCATAGCGGCACCCTCGCTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTGTGAAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTTAGCTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTTGACAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCCACGCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCGTGGAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACGAAGATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTACTACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCGGAACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAGGGCTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGAGCAGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTCATTCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGAAAGGGTCGGTCAATAGCATAGCTATTTTTTTTTCTCCTTTCGAAGGAAAGGCCTTCGCATTCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCTGACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATTGCCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCCAATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGACCGGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAAGTAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTGGCGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAAACAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTGGTTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTTAAGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTCGGATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAGTGCAACATGGCAAATTTCATTGAGAGGAATTAGCAAAGAAAAGAAATCTTCTTTCTCCGGGCCGGAGTAAATAGATCTGGTTTCAAGTAAAGCTGTAGGTAGATAGAGTTCAAGAACTTCCAAATAAAAGTTATGTATTATTCAGCAAATCATAATTACAATGTTATCCTGAGAGTGCTTGATATAAATACTATCAAAATTGACTTTTTCAATCACTAACTCAATGAATTGTATCTCAAAAAGGCAAACTTAGAACAAATTCAGTTCATAAGTTCTGTTTTTCTTTTTCCTCTCCATTACTTCTGTCTCCGGACGCATAGCTTTATTTAGTCTCCAGCCTTCTTGCTATAGAGCAGAAACCTGTCCTCATCTGCGTATCACATCTGCCTTTTGTCCTATTTGATTCTCATAGGGCTAGCCAATGAATGGTCCAAGAAAAGAAAGAAGGAAACTTCTTATATAGAGAGAACGGGTCAATAAATAGGTGCATGGCCCGCCCATCAAGAAGAACTTCCTCCACATTCTCTTTGTCTGATAGCGGCGGCAAGAATTGACATAGAAAAGCCAGCCGAGGACGGCGAGTTCATTTTTCTATTATAGCTCTTTCTCACCTCTCTGGTACTGATGCACTTTTTCCAACATATTCCTGATTCGCTTTTCACACGGCTTAGTTAATTCTTGACTTTACCGTTGCTAAACCATATTCTATAGGCCTCACTCAGTTCTGTATAGATTAAGTGCAATTCAATTCGTTAATGACCTCGCTTTGCTTTCTGTCTATCCA]


>consensus_219#0 GGCGGGTCTCATGGGATTTCATCTATGCCGGCCGTCGGAATCAAACGAGGGTCGAAGGAC CATTCGATTCATTAAGGGGGACGGCCCATTTGTAAGGCGGGGGCCCTGATGGACGACATC CCCCGGCCTCGATTCTTTTGCATAGTCTGGGGGCCGGCCGCAGCAGAGCTGCGGGGCATA GCGGCACCCTCGCTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTG TGAAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTT AGCTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTT GACAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCC ACGCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCG TGGAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACG AAGATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTA CTACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCG GAACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAG GGCTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGA GCAGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTC ATTCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGA AAGGGTCGGTCAATAGCATAGCTATTTTTTTTTCTCCTTTCGAAGGAAAGGCCTTCGCAT TCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCTG ACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATTG CCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCCA ATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGACC GGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAAG TAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTGG CGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAAA CAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTGG TTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTTA AGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTCG GATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAGT GCAACATGGCAAATTTCATTGAGAGGAATTAGCAAAGAAAAGAAATCTTCTTTCTCCGGG CCGGAGTAAATAGATCTGGTTTCAAGTAAAGCTGTAGGTAGATAGAGTTCAAGAACTTCC AAATAAAAGTTATGTATTATTCAGCAAATCATAATTACAATGTTATCCTGAGAGTGCTTG ATATAAATACTATCAAAATTGACTTTTTCAATCACTAACTCAATGAATTGTATCTCAAAA AGGCAAACTTAGAACAAATTCAGTTCATAAGTTCTGTTTTTCTTTTTCCTCTCCATTACT TCTGTCTCCGGACGCATAGCTTTATTTAGTCTCCAGCCTTCTTGCTATAGAGCAGAAACC TGTCCTCATCTGCGTATCACATCTGCCTTTTGTCCTATTTGATTCTCATAGGGCTAGCCA ATGAATGGTCCAAGAAAAGAAAGAAGGAAACTTCTTATATAGAGAGAACGGGTCAATAAA TAGGTGCATGGCCCGCCCATCAAGAAGAACTTCCTCCACATTCTCTTTGTCTGATAGCGG CGGCAAGAATTGACATAGAAAAGCCAGCCGAGGACGGCGAGTTCATTTTTCTATTATAGC TCTTTCTCACCTCTCTGGTACTGATGCACTTTTTCCAACATATTCCTGATTCGCTTTTCA CACGGCTTAGTTAATTCTTGACTTTACCGTTGCTAAACCATATTCTATAGGCCTCACTCA GTTCTGTATAGATTAAGTGCAATTCAATTCGTTAATGACCTCGCTTTGCTTTCTGTCTAT CCA



consensusID : consensus_219#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1823
fasta sequence
                              [GTGATTGATGGTATAGAGTTTTGATAGAAAACAGGTATCAAAAATATACCAAAAGAAAGAAGAGAAAGTCGAGCCTTGATTCCAGAGAGAGAGAGCCATCTCTCTGGACTGCACTCTTATAGTCGACAGCTCTGTGTGGCTTGTCAACCACCGGACCGTAGCTCCTCACACCGAGAAACCCAGTCTTCCCCCAGAAGACTGTCTTCCTCGACTATACATTCTCCTACCCCAAACACTCTAACCCAGACAGGGATTAGTTTTCAATAACACCTAGTTCGGGGCATGATGACTAACCTTCCTAACAAAAGAAAAGAGAGATAGGAAGGGAAGACCCACCTATCCATATAGAAAGAAAGCACCCTATCCCTCGTTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTGTGAAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTTAGCTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTTGACAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCCACGCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCGTGGAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACGAAGATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTACTACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCGGAACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAGGGCTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGAGCAGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTCATTCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGAAAGGGTCGGTCAATAGCATAGCTATTTTTTTTTTTCTCCTTTCGAAGGAAAGGCCTTCGCATTCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCTGACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATTGCCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCCAATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGACCGGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAAGTAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTGGCGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAAACAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTGGTTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTTAAGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTCGGATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAGTGCAACATGGCAAATTTCATTGAG]

[+] EMBL AK064451             [GTGATTGATGGTATAGAGTTTTGATAGAAAACAGGTATCAAAAATATACCAAAAGAAAGAAGAGAAAGTCGAGCCTTGATTCCAGAGAGAGAGAGCCATCTCTCTGGACTGCACTCTTATAGTCGACAGCTCTGTGTGGCTTGTCAACCACCGGACCGTAGCTCCTCACACCGAGAAACCCAGTCTTCCCCCAGAAGACTGTCTTCCTCGACTATACATTCTCCTACCCCAAACACTCTAACCCAGACAGGGATTAGTTTTCAATAACACCTAGTTCGGGGCATGATGACTAACCTTCCTAACAAAAGAAAAGAGAGATAGGAAGGGAAGACCCACCTATCCATATAGAAAGAAAGCACCCTATCCCTCGTTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTGTGAAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTTAGCTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTTGACAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCCACGCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCGTGGAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACGAAGATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTACTACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCGGAACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAGGGCTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGAGCAGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTCATTCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGAAAGGGTCGGTCAATAGCATAGCTATTTTTTTTTTTCTCCTTTCGAAGGAAAGGCCTTCGCATTCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCTGACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATTGCCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCCAATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGACCGGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAAGTAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTGGCGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAAACAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTGGTTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTTAAGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTCGGATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAGTGCAACATGGCAAATTTCATTGAG]


>consensus_219#1 GTGATTGATGGTATAGAGTTTTGATAGAAAACAGGTATCAAAAATATACCAAAAGAAAGA AGAGAAAGTCGAGCCTTGATTCCAGAGAGAGAGAGCCATCTCTCTGGACTGCACTCTTAT AGTCGACAGCTCTGTGTGGCTTGTCAACCACCGGACCGTAGCTCCTCACACCGAGAAACC CAGTCTTCCCCCAGAAGACTGTCTTCCTCGACTATACATTCTCCTACCCCAAACACTCTA ACCCAGACAGGGATTAGTTTTCAATAACACCTAGTTCGGGGCATGATGACTAACCTTCCT AACAAAAGAAAAGAGAGATAGGAAGGGAAGACCCACCTATCCATATAGAAAGAAAGCACC CTATCCCTCGTTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTGTG AAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTTAG CTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTTGA CAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCCAC GCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCGTG GAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACGAA GATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTACT ACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCGGA ACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAGGG CTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGAGC AGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTCAT TCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGAAA GGGTCGGTCAATAGCATAGCTATTTTTTTTTTTCTCCTTTCGAAGGAAAGGCCTTCGCAT TCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCTG ACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATTG CCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCCA ATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGACC GGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAAG TAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTGG CGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAAA CAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTGG TTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTTA AGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTCG GATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAGT GCAACATGGCAAATTTCATTGAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_219#0      ------------------------------------------------------------
consensus_219#1      GTGATTGATGGTATAGAGTTTTGATAGAAAACAGGTATCAAAAATATACCAAAAGAAAGA 60
                                                                                 

consensus_219#0      ------------------------------------------------------------
consensus_219#1      AGAGAAAGTCGAGCCTTGATTCCAGAGAGAGAGAGCCATCTCTCTGGACTGCACTCTTAT 120
                                                                                 

consensus_219#0      -------------------------------------------------GGCGGGTCTCA 11
consensus_219#1      AGTCGACAGCTCTGTGTGGCTTGTCAACCACCGGACCGTAGCTCCTCACACCGAGAAACC 180
                                                                        ** *   * 

consensus_219#0      TGGGATTTCATCT--ATGCCGGCCGTCGGAATCAAACGAGGGTCGAAG--GACCATTCGA 67
consensus_219#1      CAGTCTTCCCCCAGAAGACTGTCTTCCTCGACTATACATTCTCCTACCCCAAACACTCTA 240
                       *  ** *  *   *  * * *   *   *  * **      * *     * ** ** *

consensus_219#0      TTCATTAAGGGGGACGGCC--CATTTGTAA--GGCGGGGGCCCTGATGGACGACATCCCC 123
consensus_219#1      ACCCAGACAGGGATTAGTTTTCAATAACACCTAGTTCGGGGCATGATGACTAACCTTCCT 300
                       *   *  ***    *    ** *   *    *   *** * *****    ** * ** 

consensus_219#0      CGGCCTCGATTCTTTTGCATAGTCTGGG--GGCCGGCCGCAGCAGAGCTGCGGGGCATAG 181
consensus_219#1      -AACAAAAGAAAAGAGAGATAGGAAGGGAAGACCCACCTATCCATATAGAAAGAAAGCAC 359
                        *              ****   ***  * **  **    ** *      *     * 

consensus_219#0      CGGCACCCTCGCTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTGT 241
consensus_219#1      CCTATCCCTCGTTCTGCCCAGCCAGGGCATAGATCACTCTCTGTTTACTCCTACTTCTGT 419
                     *    ****** ************************************************

consensus_219#0      GAAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTTA 301
consensus_219#1      GAAGAACAGAGGCATCCAAAAAGAGACGAGAAGAAGCCCGCGCCTTTGCCTGCTTCCTTA 479
                     ************************************************************

consensus_219#0      GCTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTTG 361
consensus_219#1      GCTACGTCAGAAGGTAGGGCCTGATTGACAGACGGCTCCGAAGTAGCAGGGGCCTGTTTG 539
                     ************************************************************

consensus_219#0      ACAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCCA 421
consensus_219#1      ACAGAAGGAAGGGCCTGAATGAAGAGCGGACCAGACTCTTCTTTGTTTCAGCTGCTCCCA 599
                     ************************************************************

consensus_219#0      CGCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCGT 481
consensus_219#1      CGCACGCAGACCGGAAGATCCCAGTTGTCCTGGACTAGACAAGTACGTAGAGATCTTCGT 659
                     ************************************************************

consensus_219#0      GGAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACGA 541
consensus_219#1      GGAACCGGGGAGGGAGTCTCAATCGATCTTTTCTAGGATTCCAACTCACGCCACGCACGA 719
                     ************************************************************

consensus_219#0      AGATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTAC 601
consensus_219#1      AGATTTTTCTATTGATAGAGTTAAGGGCTCGGCTCCCCCGACTCTAAAAGGTTAGGTTAC 779
                     ************************************************************

consensus_219#0      TACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCGG 661
consensus_219#1      TACCAGCTTGCCTCTACGGAAGAGGTGTACTTTGTATTGTCTGGGGGTCATATAGATCGG 839
                     ************************************************************

consensus_219#0      AACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAGG 721
consensus_219#1      AACCCGGAGCGAGTTGAACGAAAACCTTACCCACAGCTACAACTACTGGCGCTTCAAAGG 899
                     ************************************************************

consensus_219#0      GCTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGAG 781
consensus_219#1      GCTTAGATTCTAAGGTAGGGGTGGAAGCCGTGAAAGCCTTTGGTACTTTAGTCAGGCGAG 959
                     ************************************************************

consensus_219#0      CAGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTCA 841
consensus_219#1      CAGCCCTTAAACAAAATCAAAGGCGCGACCATCCCCCCTTCCCCTATTTTTTGCATTTCA 1019
                     ************************************************************

consensus_219#0      TTCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGAA 901
consensus_219#1      TTCTCTATTTGGCCCGCCTCATGAAAAATGATAGGCCTATTGATTCGAAGTAAATACGAA 1079
                     ************************************************************

consensus_219#0      AGGGTCGGTCAATAGCATAGCTATTTTTTTTT--CTCCTTTCGAAGGAAAGGCCTTCGCA 959
consensus_219#1      AGGGTCGGTCAATAGCATAGCTATTTTTTTTTTTCTCCTTTCGAAGGAAAGGCCTTCGCA 1139
                     ********************************  **************************

consensus_219#0      TTCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCT 1019
consensus_219#1      TTCTTAATCTGGTAGGGCCGGACGGCTTTGTTTGCCCTAGCTTGGCGAATCCGCGCCCCT 1199
                     ************************************************************

consensus_219#0      GACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATT 1079
consensus_219#1      GACCGTTCTCGCGAAGTCTTTGCAACGGCTGGGAAACCAGTCTACGAAGCGAAGCCTATT 1259
                     ************************************************************

consensus_219#0      GCCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCC 1139
consensus_219#1      GCCACGCCGACCATCAAATACGAGATTGGGCCCCTTCTCAAAGATGGAATGGCCCAGCCC 1319
                     ************************************************************

consensus_219#0      AATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGAC 1199
consensus_219#1      AATAAAGGAAGGTTAACGTACGCGATGCCTTCCATTTGTACGAATGCGAACATACCCGAC 1379
                     ************************************************************

consensus_219#0      CGGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAA 1259
consensus_219#1      CGGACGTAGAGCCAAAATTCACTGGCAGACCGAGTCGGGCGCAGGTGCCAGATCCTTAAA 1439
                     ************************************************************

consensus_219#0      GTAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTG 1319
consensus_219#1      GTAAAGTCTCTATCAGCCTAGTGTACCAACCACGTGGTACGACGGGCACTCAAAGACCTG 1499
                     ************************************************************

consensus_219#0      GCGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAA 1379
consensus_219#1      GCGAATGAGGGCCCACCCCACCCAAGAGCGCTTATGTCATATGGGAACTCTTGGCTGGAA 1559
                     ************************************************************

consensus_219#0      ACAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTG 1439
consensus_219#1      ACAATCCTTATGATTTTGATATCCGGTTAGAATAATAAGAAAGAATCTAAGTCCAGGTTG 1619
                     ************************************************************

consensus_219#0      GTTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTT 1499
consensus_219#1      GTTGGTGAGCCTAGTGATAGGAGACTATCTAGCTTGGTTCGGAGAGCACTTGTTGGGTTT 1679
                     ************************************************************

consensus_219#0      AAGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTC 1559
consensus_219#1      AAGATTAGTTTTTTGCTAAATGTTACGGCCTAAATGCTGAACTATTGACTCTACTTGTTC 1739
                     ************************************************************

consensus_219#0      GGATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAG 1619
consensus_219#1      GGATGGGTGTTTACCCCAAAGTGTTCTTGGATTGCATGCATACATCCGTAAGTAACTTAG 1799
                     ************************************************************

consensus_219#0      TGCAACATGGCAAATTTCATTGAGAGGAATTAGCAAAGAAAAGAAATCTTCTTTCTCCGG 1679
consensus_219#1      TGCAACATGGCAAATTTCATTGAG------------------------------------ 1823
                     ************************                                    

consensus_219#0      GCCGGAGTAAATAGATCTGGTTTCAAGTAAAGCTGTAGGTAGATAGAGTTCAAGAACTTC 1739
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      CAAATAAAAGTTATGTATTATTCAGCAAATCATAATTACAATGTTATCCTGAGAGTGCTT 1799
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      GATATAAATACTATCAAAATTGACTTTTTCAATCACTAACTCAATGAATTGTATCTCAAA 1859
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      AAGGCAAACTTAGAACAAATTCAGTTCATAAGTTCTGTTTTTCTTTTTCCTCTCCATTAC 1919
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      TTCTGTCTCCGGACGCATAGCTTTATTTAGTCTCCAGCCTTCTTGCTATAGAGCAGAAAC 1979
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      CTGTCCTCATCTGCGTATCACATCTGCCTTTTGTCCTATTTGATTCTCATAGGGCTAGCC 2039
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      AATGAATGGTCCAAGAAAAGAAAGAAGGAAACTTCTTATATAGAGAGAACGGGTCAATAA 2099
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      ATAGGTGCATGGCCCGCCCATCAAGAAGAACTTCCTCCACATTCTCTTTGTCTGATAGCG 2159
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      GCGGCAAGAATTGACATAGAAAAGCCAGCCGAGGACGGCGAGTTCATTTTTCTATTATAG 2219
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      CTCTTTCTCACCTCTCTGGTACTGATGCACTTTTTCCAACATATTCCTGATTCGCTTTTC 2279
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      ACACGGCTTAGTTAATTCTTGACTTTACCGTTGCTAAACCATATTCTATAGGCCTCACTC 2339
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      AGTTCTGTATAGATTAAGTGCAATTCAATTCGTTAATGACCTCGCTTTGCTTTCTGTCTA 2399
consensus_219#1      ------------------------------------------------------------
                                                                                 

consensus_219#0      TCCA 2403
consensus_219#1      ----
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)