cluster # 2210

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Oryza sativa
cluster # 2210 cluster # 2210 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2210#0 length = 479 sequences # 2

consensusID : consensus_2210#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 479
fasta sequence

                              [GAGGAAGCAGAACTTTCAAACAAAAGTCGCTTACACAAGTTGATATTAGATTGTGATATTAAACGTTTGACAAAGGATTCTTTACAAGAAGAGCATATCCTTGAAAGTCTTAAACCACATAGCAATCTTCGGGAGCTACACATTAATGGGCGTGGGGGCACTACTTGCCCTTCATGGTTGGGTGTTAACTTGTCCATCAAAGGCTTGCAAACTCTTCGTCTTGATGGTGTAGACTGGAACAAATTTCCNCCTCTAGGGAAGNTGTTGNTGATTAATGAGCATGGTGAGGAATCCCTGGTTTTGTACAACA-AGAGAGAGCTTTTCNGAATTTAAAAAGGTTAGAGCTTGTTGGCATACAGAGACTAGCAAAATGGGTTGGAAATGATTCTTGCTTTGTGTTCTCTCTGCTAAAGGTGCTCATCATAAGNGATTGTCCAGGACTCACGGGNGTTGCCATTTTCACATTCCACATGNCCTCG]

[+] EMBL OSS4130A             [GAGGAAGCAGAACTTTCAAACAAAAGTCGCTTACACAAGTTGATATTAGATTGTGATATTAAACGTTTGACAAAGGATTCTTTACAAGAAGAGCATATCCTTGAAAGTCTTAAACCACATAGCAATCTTCGGGAGCTACACATTAATGGGCGTGGGGGCACTACTTGCCCTTCATGGTTGGGTGTTAACTTGTCCATCAAAGGCTTGCAAACTCTTCGTCTTGATGGTGTAGACTGGAACAAATTTCCNCCTCTAGGGAAGNTGTTGNTGATTAATGAGCATGGTGAGGAATCCCTGGTTTTGTACAACA AGAGAGAGCTTTTCNGAATTT                                                                                                                                                    ]
[+] EMBL OSS3923A             [ AGGAAGCAGAACTTTCAAACAAAAGTCGCTTACACAAGTTGATATTAGATTGTGATATTAAACGTTTGACAAAGGATTCTTTACAAGAAGAGCATATCCTTGAAAGTCTTAAACCACATAGCANTCTTCGGGAGCTACACATTAATGGGCGTGGGGGCACTACTTGCCCTTCATGGTTGGGTGTTAACTTGTCCATCAAAGGCTTGCAAACTCTTCGTCTTGATGGTGTAGACTGGAACAAATTTCCTCCTCTAGGGAAGTTGTTGTTGATTAATGAGCATGGTGAAGAATCCCTGG TTTGTACAACAGAGAG GAGC TTTCCGAATTTAAAAAGGTTAGAGCTTGTTGGCATACAGAGACTAGCAAAATGGGTTGGAAATGATTCTTGCTTTGTGTTCTCTCTGCTAAAGGTGCTCATCATAAGNGATTGTCCAGGACTCACGGGNGTTGCCATTTTCACATTCCACATGNCCTCG]




>consensus_2210#0
GAGGAAGCAGAACTTTCAAACAAAAGTCGCTTACACAAGTTGATATTAGATTGTGATATT
AAACGTTTGACAAAGGATTCTTTACAAGAAGAGCATATCCTTGAAAGTCTTAAACCACAT
AGCAATCTTCGGGAGCTACACATTAATGGGCGTGGGGGCACTACTTGCCCTTCATGGTTG
GGTGTTAACTTGTCCATCAAAGGCTTGCAAACTCTTCGTCTTGATGGTGTAGACTGGAAC
AAATTTCCNCCTCTAGGGAAGNTGTTGNTGATTAATGAGCATGGTGAGGAATCCCTGGTT
TTGTACAACAAGAGAGAGCTTTTCNGAATTTAAAAAGGTTAGAGCTTGTTGGCATACAGA
GACTAGCAAAATGGGTTGGAAATGATTCTTGCTTTGTGTTCTCTCTGCTAAAGGTGCTCA
TCATAAGNGATTGTCCAGGACTCACGGGNGTTGCCATTTTCACATTCCACATGNCCTCG

clustalw multiple alignements is not computed in this case