cluster # 2217

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Oryza sativa
cluster # 2217 cluster # 2217 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2217#0 length = 1916 sequences # 2
consensusID : consensus_2217#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1916
fasta sequence
                              [CATGTAGATGTCTTTGCATAATAAACTTGTAATTTAGAGATGAAATAACAGGCTTGTTCGGCTGAGATTTATGCTGCAGCAACAGCACCACCACACAAGAGAAAGCATGACCGCTGCAGCGGCTGCGCTGTACAGCTATGCGGAACAAGGCCAACATAGATACAATATGTACCAGGACTATTTTGTAATGTGAAAGTACACCAAGAAGTAGTAGGTAAAAAAAGGAGTAGGTTGGGTATCGTTTCACTGCCAACACCATTGTCTTCTTTCAGGAGAGTAAAGTATATATATATTCTAAATGTTCTCACCCTTGACGTGCAAAAGTTCAGCTGTAGTATATTCAGTGGAATTTCAATGTCATCATTAGCTGCATATACCTCATAAAGTAATCTGTTCTTCAATGTTTACTATTTGCTCAGGGTCTCCTACTCTTTGTTTCATGAACCACAACATAAACACGCTTTAGGTAATATCTGTGTTGATATATTCTGCAGATATCTACTTGCTTAAATTGTGATGGCAAAGGGAAGGTAATTACTGAAAATTGCACTAGCTGCTGTGGGTCAGGCAAAATCCAAGTTGAACGCAATATCAGGGTAGACATACCTGGAGGTATTCATGATGGTTCTGCCATTCGAATTACCAGAGGAGGTAGCGTTGATAATCAAAGGCGCGCAACTGGTGACCTATACATATTTGTTCATGTTAATAAAAAAGAAGGCATCCACAGAGAAGGCCTCGATCTGTTCTCAGATGTCACAATAGATTATACTGATGCAATTTTAGGAACCACAGTGAAGGTAGCAGCAGAACTCTGGCTCCAGCTTTACCTAGAAAGAGTGTTTCTTATTTCAGGTTGAAACAATAGAGGGATTCAAGGATCTTTATATTCCTCCTGGCACTCAGCCTGGGGAGCGGCTGAAATTTGCTCAACTGGGAGCTCCAGACATTAAGAATCCTACCATTAGAGGAGATCATAATTTTGTGATAAATGTGAAGATCCCGAAGAGTATCAGGTTTGAGTTGCGAGTATTGTTGTACTTTGTGATGGGTTAATGCTAGCCGTAGTATTGCTTTGTAGTTTTTATGCGGTAAACATCCTTGGTTACAGATTATACTGTTACAAGGCGCATCAAATTATGTTATATTACTCTTAGCTTTTGGTGCTTTGCCTTATCAATGCTTATATTCATCAGCAACCAAGAACGAACATTAGTACAAGAAATTGCAGCACTGAAGGAAACTGGGTGTATTTCTGTTCCAGGTGAAGAGACTAAAAACAGAGAAAATTTGGGAGAGAGAAACTCCCATTCATCCACAGGGAAGAGAAGATCCCTCTGGCGATCTATCAGGAATTTGTTCAGGGGCGACGATGGGGATACGAGATTTGCTTCAATCAGCGCACAATCTGTTACTCCATTATGGACTCCGCGACGAGGATCTCATCCAGCTGTTCTGTTGCTAGAAGGATTCCTGATGATCACAGTGCTCTTATTCGTGATAAGCAGAACTCGTATAATCAGGTCGACTCCAAAGCGG-TATGA-TCGTCCTACTGAAGCTAAAGAAGCCGATGGAGAGACTTAAAA-TTTATTATGGTGATGTTATTTGGACGTTATTGCACACAGATTTTTTCTCTTCTTTTTCCCATAATATTCCTATGGAGTTTATGTGCCTAGCAGTCTGAGCGGGGAAGAAGCGCTCCGGCTTGGTTTGTTATTGTAGGGGAAAATGCAGCCAACATCGGGTACAGTGGAGCCTAATAGTAACAGAAGTGACATAGAACTAACACAATTTTTAGCAGGCAGTCAGAAAAAAGGACTTGTATTCATCAGTTGACCATGCTACTACTGCATACTGTAGTACTATGAGTAACCAAATTTTGAAGCTAGTTATCACCATTTTACATGCGCAAAAAA]

[+] EMBL AK063432             [CATGTAGATGTCTTTGCATAATAAACTTGTAATTTAGAGATGAAATAACAGGCTTGTTCGGCTGAGATTTATGCTGCAGCAACAGCACCACCACACAAGAGAAAGCATGACCGCTGCAGCGGCTGCGCTGTACAGCTATGCGGAACAAGGCCAACATAGATACAATATGTACCAGGACTATTTTGTAATGTGAAAGTACACCAAGAAGTAGTAGGTAAAAAAAGGAGTAGGTTGGGTATCGTTTCACTGCCAACACCATTGTCTTCTTTCAGGAGAGTAAAGTATATATATATTCTAAATGTTCTCACCCTTGACGTGCAAAAGTTCAGCTGTAGTATATTCAGTGGAATTTCAATGTCATCATTAGCTGCATATACCTCATAAAGTAATCTGTTCTTCAATGTTTACTATTTGCTCAGGGTCTCCTACTCTTTGTTTCATGAACCACAACATAAACACGCTTTAGGTAATATCTGTGTTGATATATTCTGCAGATATCTACTTGCTTAAATTGTGATGGCAAAGGGAAGGTAATTACTGAAAATTGCACTAGCTGCTGTGGGTCAGGCAAAATCCAAGTTGAACGCAATATCAGGGTAGACATACCTGGAGGTATTCATGATGGTTCTGCCATTCGAATTACCAGAGGAGGTAGCGTTGATAATCAAAGGCGCGCAACTGGTGACCTATACATATTTGTTCATGTTAATAAAAAAGAAGGCATCCACAGAGAAGGCCTCGATCTGTTCTCAGATGTCACAATAGATTATACTGATGCAATTTTAGGAACCACAGTGAAGGTAGCAGCAGAACTCTGGCTCCAGCTTTACCTAGAAAGAGTGTTTCTTATTTCAGGTTGAAACAATAGAGGGATTCAAGGATCTTTATATTCCTCCTGGCACTCAGCCTGGGGAGCGGCTGAAATTTGCTCAACTGGGAGCTCCAGACATTAAGAATCCTACCATTAGAGGAGATCATAATTTTGTGATAAATGTGAAGATCCCGAAGAGTATCAGGTTTGAGTTGCGAGTATTGTTGTACTTTGTGATGGGTTAATGCTAGCCGTAGTATTGCTTTGTAGTTTTTATGCGGTAAACATCCTTGGTTACAGATTATACTGTTACAAGGCGCATCAAATTATGTTATATTACTCTTAGCTTTTGGTGCTTTGCCTTATCAATGCTTATATTCATCAGCAACCAAGAACGAACATTAGTACAAGAAATTGCAGCACTGAAGGAAACTGGGTGTATTTCTGTTCCAGGTGAAGAGACTAAAAACAGAGAAAATTTGGGAGAGAGAAACTCCCATTCATCCACAGGGAAGAGAAGATCCCTCTGGCGATCTATCAGGAATTTGTTCAGGGGCGACGATGGGGATACGAGATTTGCTTCAATCAGCGCACAATCTGTTACTCCATTATGGACTCCGCGACGAGGATCTCATCCAGCTGTTCTGTTGCTAGAAGGATTCCTGATGATCACAGTGCTCTTATTCGTGATAAGCAGAACTCGTATAATCAGGTCGACTCCAAAGCGG TATGA TCGTCCTACTGAAGCTAAAGAAGCCGATGGAGAGACTTAAAA TTTATTATGGTGATGTTATTTGGACGTTATTGCACACAGATTTTTTCTCTTCTTTTTCCCATAATATTCCTATGGAGTTTATGTGCCTAGCAGTCTGAGCGGGGAAGAAGCGCTCCGGCTTGGTTTGTTATTGTAGGGGAAAATGCAGCCAACATCGGGTACAGTGGAGCCTAATAGTAACAGAAGTGACATAGAACTAACACAATTTTTAGCAGGCAGTCAGAAAAAAGGACTTGTATTCATCAGTTGACCATGCTACTACTGCATACTGTAGTACTATGAGTAACCAAATTTT                                   ]
[+] EMBL AU033034             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATANGCAGAACTCGTATAATCAGGTCGACTCCAAAGCGGTTATGATTCGTCCTACTGANGCTAAAGAAGCCGATGGAGAGACTTAAAATTTTATNATGGTGATGTTATTTGGACGTTATTGCACACAGATTTTTTCTCTTCTTTTTCCCATAATATNCCTATGGAGTTTATGTGCCTAGCAGTCTGAGCGGGGAAGAAGCGCTCCGGCTTGGTTTGTTATTGTAGGGGAAAATGCAGCCAACATCGGGTACAGTGGAGCCTAATAGTAACAGAAGTGACATAGAACTAACACAATTTTTAGCAGGCAGTCAGAAAAAAGGACTTGTATTCATCAGTTGACCATGCTACTACTGCATACTGTAGTACTATGAGTAACCAAATTTTGAAGCTAGTTATCACCATTTTACATGCGCAAAAAA]




>consensus_2217#0
CATGTAGATGTCTTTGCATAATAAACTTGTAATTTAGAGATGAAATAACAGGCTTGTTCG
GCTGAGATTTATGCTGCAGCAACAGCACCACCACACAAGAGAAAGCATGACCGCTGCAGC
GGCTGCGCTGTACAGCTATGCGGAACAAGGCCAACATAGATACAATATGTACCAGGACTA
TTTTGTAATGTGAAAGTACACCAAGAAGTAGTAGGTAAAAAAAGGAGTAGGTTGGGTATC
GTTTCACTGCCAACACCATTGTCTTCTTTCAGGAGAGTAAAGTATATATATATTCTAAAT
GTTCTCACCCTTGACGTGCAAAAGTTCAGCTGTAGTATATTCAGTGGAATTTCAATGTCA
TCATTAGCTGCATATACCTCATAAAGTAATCTGTTCTTCAATGTTTACTATTTGCTCAGG
GTCTCCTACTCTTTGTTTCATGAACCACAACATAAACACGCTTTAGGTAATATCTGTGTT
GATATATTCTGCAGATATCTACTTGCTTAAATTGTGATGGCAAAGGGAAGGTAATTACTG
AAAATTGCACTAGCTGCTGTGGGTCAGGCAAAATCCAAGTTGAACGCAATATCAGGGTAG
ACATACCTGGAGGTATTCATGATGGTTCTGCCATTCGAATTACCAGAGGAGGTAGCGTTG
ATAATCAAAGGCGCGCAACTGGTGACCTATACATATTTGTTCATGTTAATAAAAAAGAAG
GCATCCACAGAGAAGGCCTCGATCTGTTCTCAGATGTCACAATAGATTATACTGATGCAA
TTTTAGGAACCACAGTGAAGGTAGCAGCAGAACTCTGGCTCCAGCTTTACCTAGAAAGAG
TGTTTCTTATTTCAGGTTGAAACAATAGAGGGATTCAAGGATCTTTATATTCCTCCTGGC
ACTCAGCCTGGGGAGCGGCTGAAATTTGCTCAACTGGGAGCTCCAGACATTAAGAATCCT
ACCATTAGAGGAGATCATAATTTTGTGATAAATGTGAAGATCCCGAAGAGTATCAGGTTT
GAGTTGCGAGTATTGTTGTACTTTGTGATGGGTTAATGCTAGCCGTAGTATTGCTTTGTA
GTTTTTATGCGGTAAACATCCTTGGTTACAGATTATACTGTTACAAGGCGCATCAAATTA
TGTTATATTACTCTTAGCTTTTGGTGCTTTGCCTTATCAATGCTTATATTCATCAGCAAC
CAAGAACGAACATTAGTACAAGAAATTGCAGCACTGAAGGAAACTGGGTGTATTTCTGTT
CCAGGTGAAGAGACTAAAAACAGAGAAAATTTGGGAGAGAGAAACTCCCATTCATCCACA
GGGAAGAGAAGATCCCTCTGGCGATCTATCAGGAATTTGTTCAGGGGCGACGATGGGGAT
ACGAGATTTGCTTCAATCAGCGCACAATCTGTTACTCCATTATGGACTCCGCGACGAGGA
TCTCATCCAGCTGTTCTGTTGCTAGAAGGATTCCTGATGATCACAGTGCTCTTATTCGTG
ATAAGCAGAACTCGTATAATCAGGTCGACTCCAAAGCGGTATGATCGTCCTACTGAAGCT
AAAGAAGCCGATGGAGAGACTTAAAATTTATTATGGTGATGTTATTTGGACGTTATTGCA
CACAGATTTTTTCTCTTCTTTTTCCCATAATATTCCTATGGAGTTTATGTGCCTAGCAGT
CTGAGCGGGGAAGAAGCGCTCCGGCTTGGTTTGTTATTGTAGGGGAAAATGCAGCCAACA
TCGGGTACAGTGGAGCCTAATAGTAACAGAAGTGACATAGAACTAACACAATTTTTAGCA
GGCAGTCAGAAAAAAGGACTTGTATTCATCAGTTGACCATGCTACTACTGCATACTGTAG
TACTATGAGTAACCAAATTTTGAAGCTAGTTATCACCATTTTACATGCGCAAAAAA
clustalw multiple alignements is not computed in this case