cluster # 2238

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Oryza sativa
cluster # 2238 cluster # 2238 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2238#0 length = 1523 sequences # 2
consensusID : consensus_2238#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1523
fasta sequence
                              [GCTCCCCGTAAATTCTCCCCCGAAACCGCCCGAGATGGCGGCTGCGGCGGCGCGGCTGTTGGAGAGGGCGACGAGAACCGCGGCATCCTGCTCCTCCGCTCTTCTCCGCAGTCCTCTGGATTCTTTCTCCGGACGCTTCCCAAGCTTCCGGTCGCCCCTCCTACGGCCGGCTCCGGCGCCGTCGACCGTCTTCCCCCGGGGCCTCTCCGACACGGCCTTCGACGCGCAGGCGCTGGACACCCGCGTACCCGCCACCGTCATCACCGGCTTCCTCGGCTCCGGCAAGACAACCCTCCTGAATCACATTTTAACTTCACAGCATGGGAAGAGAATCGCTGTAATTGAGAACGAGTTTGGTGAGGTGGACATTGATAGCTCACTCGTTGCAAGTCATTCATCAGTTGCCGAGGACATTGTAATGGTGAACAATGGTTGCTTGTGTTGTACTGTCCGAGGGGATCTTGTAAAGATGCTTCTGAAGTTGGTAAAGCAAAAGGGGGACAAGTTTGATCATATTGTTATTGAAACAACAGGTCTTGCAAAGCCTGGTCCTGTCATTGAGACATTCTGTTCTGATGAACTGGTCTCTAGATATGTGAAGCTTGATGGTGTGGTTACTATGGTTGATTGTAAGCATGCCATGAAACATTTGAATGAAGTAAAGGCCAGGTGGGTTGTAAATGAGGCTGTAGAGCAAGTTGCTTATGCAGACAGGATTATATTGAACAAGACTGATTTGGTTGATAATGCAGAACTGGAGGTGTTAATTAACAAAATTAAGCTCATAAATGGGATGGCACAGATGAGAAAAACAAAGTTTGGTGATGTTGACATGGATTTTGTGCTAGGAATTGGGGGCTATGATCTTGATAGGATTGAGTCTGAAGTCCAGTTGCATGAAAGAAAAGAGACAGGTCATTGCCATGCTGGAGAAGAACATGGGCATCAGCACCATCATGGACATGTCCATGATTCAGCTGTCTCAAGTGTTAGCATTGTTTCGGAGGGAGTACTTGATCTTGATGAGGTGAATGACTGGCTTGAGAGACTCGTTGAAGAGAAA-GGGGAGGATCTTTATAGATTGAAGGGTGTAATCTCCGTAAATGAGTCAACTGGACGTTTCGTATTCCA-GGGTGTGCACTCTATGTTGGAGGGA-TGCCCAGCTAAACCATGGGAGCCGGATGAGA-AAAGA-TTCAACAAATTAGTATTTATTGGAAGGAATTTGGATGAAGCTGCA-CTGCGAAAAGCCTTCAAAGGCTGCTTACTGTGAACA-CTCTGATCACGTATTGAGTCCTGGGAAGCCATGCATATATCAAACTGTACAAGATGTTTGCCTTGTGCTCGCTGATAAAATGCTTACTGTTTGTCACCAACGTATTAGGCCAATCTAAATGTGTTGCATGTCATACGTGGGTGGTGGGTCATGGTTTACGTTTATTTGTGGTATCCTCATCTGTGCCAGGATCATACCTGTGTATCATGGACAATCAGACAACAGAGTAAACTTTNCCTAAGGGAAAAAA]

[+] EMBL AK065249             [GCTCCCCGTAAATTCTCCCCCGAAACCGCCCGAGATGGCGGCTGCGGCGGCGCGGCTGTTGGAGAGGGCGACGAGAACCGCGGCATCCTGCTCCTCCGCTCTTCTCCGCAGTCCTCTGGATTCTTTCTCCGGACGCTTCCCAAGCTTCCGGTCGCCCCTCCTACGGCCGGCTCCGGCGCCGTCGACCGTCTTCCCCCGGGGCCTCTCCGACACGGCCTTCGACGCGCAGGCGCTGGACACCCGCGTACCCGCCACCGTCATCACCGGCTTCCTCGGCTCCGGCAAGACAACCCTCCTGAATCACATTTTAACTTCACAGCATGGGAAGAGAATCGCTGTAATTGAGAACGAGTTTGGTGAGGTGGACATTGATAGCTCACTCGTTGCAAGTCATTCATCAGTTGCCGAGGACATTGTAATGGTGAACAATGGTTGCTTGTGTTGTACTGTCCGAGGGGATCTTGTAAAGATGCTTCTGAAGTTGGTAAAGCAAAAGGGGGACAAGTTTGATCATATTGTTATTGAAACAACAGGTCTTGCAAAGCCTGGTCCTGTCATTGAGACATTCTGTTCTGATGAACTGGTCTCTAGATATGTGAAGCTTGATGGTGTGGTTACTATGGTTGATTGTAAGCATGCCATGAAACATTTGAATGAAGTAAAGGCCAGGTGGGTTGTAAATGAGGCTGTAGAGCAAGTTGCTTATGCAGACAGGATTATATTGAACAAGACTGATTTGGTTGATAATGCAGAACTGGAGGTGTTAATTAACAAAATTAAGCTCATAAATGGGATGGCACAGATGAGAAAAACAAAGTTTGGTGATGTTGACATGGATTTTGTGCTAGGAATTGGGGGCTATGATCTTGATAGGATTGAGTCTGAAGTCCAGTTGCATGAAAGAAAAGAGACAGGTCATTGCCATGCTGGAGAAGAACATGGGCATCAGCACCATCATGGACATGTCCATGATTCAGCTGTCTCAAGTGTTAGCATTGTTTCGGAGGGAGTACTTGATCTTGATGAGGTGAATGACTGGCTTGAGAGACTCGTTGAAGAGAAA GGGGAGGATCTTTATAGATTGAAGGGTGTAATCTCCGTAAATGAGTCAACTGGACGTTTCGTATTCCA GGGTGTGCACTCTATGTTGGAGGGA TGCCCAGCTAAACCATGGGAGCCGGATGAGA AAAGA TTCAACAAATTAGTATTTATTGGAAGGAATTTGGATGAAGCTGCA CTGCGAAAAGCCTTCAAAGGCTGCTTACTGTGAACA CTCTGATCACGTATTGAGTCCTGGGAAGCCATGCATATATCAAACTGTACAAGATGTTTGCCTTGTGCTCGCTGATAAAATGCTTACTGTTTGTCACCAACGTATTAGGCCAATCTAAATGTGTTGCATGTCATACGTGGGTGGTGGGTCATGGTTTACGTTTATTTGTGGTATCCTCATCTGTGCCAGGATCATACCTGTGTATCATGGACAATCAGACAACAGAGTAAACT                 ]
[+] EMBL BI807105             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGATGAGGTGAATGACTGGCTTGAGAGACTCGTTGAAGAGAAAGGGGGAGGATCTTTATAGATTGAAGGGTGTAATCTCCGTAAATGAGTCAACTGGAC TTTCGTATTCCACGGGTGT CACTCTATGTTGGAGGGATTGCCCAGCTAAACCATGGGACCCGGATGAGACAAAGAGTTCAAC AATTAGTATTTATTGGAAGGAATTTGGATGAAGCTGCACCTGCGAAAAGCCTTCAAAGGCTGCTTACTGTGAACACCTCTGATCACGTATTGAGTCCTGGGAAGCCATGCATATATC  ACTGTACAAGATGTTT CCTTGTGCTCGCTGAT AAATGCTTACTGTTTGTCACCAACGTATTA GCC ATCTAAATGTGTTGCATGTCATACGTGGGTGGTGGGTCATGGTTTACGTTTATTTGTGGTATCCTCATCTGT CCAGGATCATACCTGTGTATCATGGAC ATCAGAC ACAGAGTAAACTTTNCCTAAGGGAAAAAA]




>consensus_2238#0
GCTCCCCGTAAATTCTCCCCCGAAACCGCCCGAGATGGCGGCTGCGGCGGCGCGGCTGTT
GGAGAGGGCGACGAGAACCGCGGCATCCTGCTCCTCCGCTCTTCTCCGCAGTCCTCTGGA
TTCTTTCTCCGGACGCTTCCCAAGCTTCCGGTCGCCCCTCCTACGGCCGGCTCCGGCGCC
GTCGACCGTCTTCCCCCGGGGCCTCTCCGACACGGCCTTCGACGCGCAGGCGCTGGACAC
CCGCGTACCCGCCACCGTCATCACCGGCTTCCTCGGCTCCGGCAAGACAACCCTCCTGAA
TCACATTTTAACTTCACAGCATGGGAAGAGAATCGCTGTAATTGAGAACGAGTTTGGTGA
GGTGGACATTGATAGCTCACTCGTTGCAAGTCATTCATCAGTTGCCGAGGACATTGTAAT
GGTGAACAATGGTTGCTTGTGTTGTACTGTCCGAGGGGATCTTGTAAAGATGCTTCTGAA
GTTGGTAAAGCAAAAGGGGGACAAGTTTGATCATATTGTTATTGAAACAACAGGTCTTGC
AAAGCCTGGTCCTGTCATTGAGACATTCTGTTCTGATGAACTGGTCTCTAGATATGTGAA
GCTTGATGGTGTGGTTACTATGGTTGATTGTAAGCATGCCATGAAACATTTGAATGAAGT
AAAGGCCAGGTGGGTTGTAAATGAGGCTGTAGAGCAAGTTGCTTATGCAGACAGGATTAT
ATTGAACAAGACTGATTTGGTTGATAATGCAGAACTGGAGGTGTTAATTAACAAAATTAA
GCTCATAAATGGGATGGCACAGATGAGAAAAACAAAGTTTGGTGATGTTGACATGGATTT
TGTGCTAGGAATTGGGGGCTATGATCTTGATAGGATTGAGTCTGAAGTCCAGTTGCATGA
AAGAAAAGAGACAGGTCATTGCCATGCTGGAGAAGAACATGGGCATCAGCACCATCATGG
ACATGTCCATGATTCAGCTGTCTCAAGTGTTAGCATTGTTTCGGAGGGAGTACTTGATCT
TGATGAGGTGAATGACTGGCTTGAGAGACTCGTTGAAGAGAAAGGGGAGGATCTTTATAG
ATTGAAGGGTGTAATCTCCGTAAATGAGTCAACTGGACGTTTCGTATTCCAGGGTGTGCA
CTCTATGTTGGAGGGATGCCCAGCTAAACCATGGGAGCCGGATGAGAAAAGATTCAACAA
ATTAGTATTTATTGGAAGGAATTTGGATGAAGCTGCACTGCGAAAAGCCTTCAAAGGCTG
CTTACTGTGAACACTCTGATCACGTATTGAGTCCTGGGAAGCCATGCATATATCAAACTG
TACAAGATGTTTGCCTTGTGCTCGCTGATAAAATGCTTACTGTTTGTCACCAACGTATTA
GGCCAATCTAAATGTGTTGCATGTCATACGTGGGTGGTGGGTCATGGTTTACGTTTATTT
GTGGTATCCTCATCTGTGCCAGGATCATACCTGTGTATCATGGACAATCAGACAACAGAG
TAAACTTTNCCTAAGGGAAAAAA
clustalw multiple alignements is not computed in this case