These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2267#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2627 fasta sequence [AGGGCTCGGCTCCACACGAACGCGACGCGGCGGCCGCCACCGATTCCATCCGGAGGAAGGAGCCGCGCCGCCTCCTTCCTATATCCCTCCTCCTCTCCCGTCCTAAACCCTAGCCGCGACCGCGAGTTCGGGGTCCTAATCCGGATCGACTCCGCCTCCCCGAGTCGCTCGGACGCGTTCTTCTTCCGGGTTTGACTTTGTGCTGCCCAAGATTGCATCTCCAGCGGAAGAATCAGAGGGATTAAATTAACGCTGTCTGGCTGCGCCATTAATAACCTTGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCCACTGGAGTGGAGGCTGTGAGCAAGCTAGTGGAGTGGGGGCGTTTCTTAGGCAGGTGCTATGGCGACAGCAACAATGGCAACCGCAGCTGGCGCGGCTGCGCTTCTGTACTACACGCTGAACCGCCGGCTTCAGGTGGAGAAGCTGAATCAGGAAGGCGATTGCGGCAATGAAAGAGATGCCGCGACGAGGGGGGCCCTCAGTACCACCAGCAGGAGCAGGGTGTCAAGGAGGGATGTTCGTGCCCCTGCCACATGGCTGGAGACAATTTCCACTCTGTCGGAGACACTGCGGTTCACATACTCAGAGACCCTTGGGAAGTGGCCCATCGGTGACCTCGCTTTTGGGATTAGCTTCCTCCTCAAGAGGCAGGGGAATGTACCTGTAGCAAGCATATATGCTGGAGATGATAGTGTGGAGCTCAATGGAGCTCCAGTAATTGCTGACTTAAAGCATCATTTAAATTTGTTGACACTATGTTGGCATTTCTCCAAGAAGCCGTTCCCGTTGTTTTTGGAGGCGACTGGCTACTCTTCGGAGGATGTTCTTATGCAAGAGCCTAAAGCAGGAATTTTGAAGCCAGCTTTCACCATTATACTTGATAGAGACAAGCAATGTATACTTCTATTAATTAGGGGAACCCACAGCATCAGGGACACACTAACAGCAGCCACTGGTGCTGTGGTTCCATTCCACCATACTATTGTACAGGAAGGTGGTGTTAGCGATTTAGTTTTAGGGTACGCGCACTTTGGGATGGTTGCAGCAGCTAGATGGATTGCAAAGCTTGCAGCCCCTTGTCTTGCTCAGGCATTGCATACTCATCCAGATTATAAAATAAAGATTGTTGGACATTCACTTGGTGGTGGTACAGCAGCTCTGTTGACATATGTCCTGAGGGAACAGCAGGAGTTTGCATCTACTACTTGTGTCTCCTTTGCTCCAGCTGCTTGTATGACATGGGATCTGGCAGAATCAGGAGTGCATTTTATCACTACAGTCATCAATGGAGCTGATCTGGTGCCAACCTTTTCAGCTGCATCAGTAGACGATCTTCGTTCAGAGGTTACTGCATCTGCCTGGTTAAACGATCTGCGCCACCAAATAGAGCAAACCAGAATTCTGAGCACTTTCTATCGATCTGCGTCAGCCTTGGGATCAAGACTTCCTTCAATAGCAAATGCCAAAGCAAGAGTAGCTGGTGCTGGTGCTATCCTAAGACCTGTATCTACCGGGACACAGGTTGTAATGAGGAGAGCTCGTAGTGTAGCACAAGCAGCTTGGACAAGACCAGCACTTCAGCTATCCTCATGGACATGTATTGGCCCAAGGAGGCGAACTAATACTGTATCCACTTCAACAGTAACATCAGAAGAAATAAGAGCAACAACAAATGATGGCTCTGAGTCCACTTCTCTGTTGACTGAAACCACAGAGATAGTTAAAACTGAAACCATGCAGTTTGCTTCATCAGAAGAGGTTCAGAGTTCGAGTGAGGTGTCAGATGCTGTTGGAATGATGGATGAGAAGGTAGATAGTGACGGTGAGGACATCATTGATCACCATGTGGATGAGGACAGGATGACTGACGTAGAGCTGTGGCAGCAACTTGAAAATGAGTTGTACCGAAGGAGTGAAGATGACGAAATAGTGGAGGATATGACTGAAAGTGCTATTACTGAAGAGGTGGGTGGCACAGCTGAAGATGTGCTCAGTGAGACCAATGACAAGGAGGTACATAGATTTTATCCTCCAGGAAAAATCATGCATATATTAACTTCCACCATAGAGGAAACAGTCAGTGCCGAAGAGTCGAGCGTGCCTCATGAAGATGACACGACCGGTGATTC-GGACACC-AGAATAGGCATCTTCTTGACCCCAAGGTCATTAT-ATGGC-AAACTGAGGCTTTCAAAAATGATGATTAACGAT-CAT-TACATGCCTATAT-ATAGAAGAAATATTGAGCAGTTGATCGCTGAGCTTGAGAAGGATTCGTCATTCCCAGTCAGTGATTGTCTTGACAGTGAAGTT-CCCT-AGTTTGACACATACATATATGTAGTTCCAGCTGTTGTAAACGCTGATGCAATAGAATGATAGTTTCGTTAAGTGTATCTAACATCCTCTGGAATAATTACAGAATTCTCAGGTCCCTAATCACAAGGCACCACAAACGTTGCCCTATTTCTTACAAACTCAAGGACCATTTCTGTTACGCAAAGAAATTTCTACCTTTTTTTCGTTTAGAGGATGTGAAATTATTTAAGGGATTAGCTATACAACTTTGAACGGAAAATTTCCCTAAAATCTATTAAATGTA] [+] EMBL AK063558 [AGGGCTCGGCTCCACACGAACGCGACGCGGCGGCCGCCACCGATTCCATCCGGAGGAAGGAGCCGCGCCGCCTCCTTCCTATATCCCTCCTCCTCTCCCGTCCTAAACCCTAGCCGCGACCGCGAGTTCGGGGTCCTAATCCGGATCGACTCCGCCTCCCCGAGTCGCTCGGACGCGTTCTTCTTCCGGGTTTGACTTTGTGCTGCCCAAGATTGCATCTCCAGCGGAAGAATCAGAGGGATTAAATTAACGCTGTCTGGCTGCGCCATTAATAACCTTGGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTCCACTGGAGTGGAGGCTGTGAGCAAGCTAGTGGAGTGGGGGCGTTTCTTAGGCAGGTGCTATGGCGACAGCAACAATGGCAACCGCAGCTGGCGCGGCTGCGCTTCTGTACTACACGCTGAACCGCCGGCTTCAGGTGGAGAAGCTGAATCAGGAAGGCGATTGCGGCAATGAAAGAGATGCCGCGACGAGGGGGGCCCTCAGTACCACCAGCAGGAGCAGGGTGTCAAGGAGGGATGTTCGTGCCCCTGCCACATGGCTGGAGACAATTTCCACTCTGTCGGAGACACTGCGGTTCACATACTCAGAGACCCTTGGGAAGTGGCCCATCGGTGACCTCGCTTTTGGGATTAGCTTCCTCCTCAAGAGGCAGGGGAATGTACCTGTAGCAAGCATATATGCTGGAGATGATAGTGTGGAGCTCAATGGAGCTCCAGTAATTGCTGACTTAAAGCATCATTTAAATTTGTTGACACTATGTTGGCATTTCTCCAAGAAGCCGTTCCCGTTGTTTTTGGAGGCGACTGGCTACTCTTCGGAGGATGTTCTTATGCAAGAGCCTAAAGCAGGAATTTTGAAGCCAGCTTTCACCATTATACTTGATAGAGACAAGCAATGTATACTTCTATTAATTAGGGGAACCCACAGCATCAGGGACACACTAACAGCAGCCACTGGTGCTGTGGTTCCATTCCACCATACTATTGTACAGGAAGGTGGTGTTAGCGATTTAGTTTTAGGGTACGCGCACTTTGGGATGGTTGCAGCAGCTAGATGGATTGCAAAGCTTGCAGCCCCTTGTCTTGCTCAGGCATTGCATACTCATCCAGATTATAAAATAAAGATTGTTGGACATTCACTTGGTGGTGGTACAGCAGCTCTGTTGACATATGTCCTGAGGGAACAGCAGGAGTTTGCATCTACTACTTGTGTCTCCTTTGCTCCAGCTGCTTGTATGACATGGGATCTGGCAGAATCAGGAGTGCATTTTATCACTACAGTCATCAATGGAGCTGATCTGGTGCCAACCTTTTCAGCTGCATCAGTAGACGATCTTCGTTCAGAGGTTACTGCATCTGCCTGGTTAAACGATCTGCGCCACCAAATAGAGCAAACCAGAATTCTGAGCACTTTCTATCGATCTGCGTCAGCCTTGGGATCAAGACTTCCTTCAATAGCAAATGCCAAAGCAAGAGTAGCTGGTGCTGGTGCTATCCTAAGACCTGTATCTACCGGGACACAGGTTGTAATGAGGAGAGCTCGTAGTGTAGCACAAGCAGCTTGGACAAGACCAGCACTTCAGCTATCCTCATGGACATGTATTGGCCCAAGGAGGCGAACTAATACTGTATCCACTTCAACAGTAACATCAGAAGAAATAAGAGCAACAACAAATGATGGCTCTGAGTCCACTTCTCTGTTGACTGAAACCACAGAGATAGTTAAAACTGAAACCATGCAGTTTGCTTCATCAGAAGAGGTTCAGAGTTCGAGTGAGGTGTCAGATGCTGTTGGAATGATGGATGAGAAGGTAGATAGTGACGGTGAGGACATCATTGATCACCATGTGGATGAGGACAGGATGACTGACGTAGAGCTGTGGCAGCAACTTGAAAATGAGTTGTACCGAAGGAGTGAAGATGACGAAATAGTGGAGGATATGACTGAAAGTGCTATTACTGAAGAGGTGGGTGGCACAGCTGAAGATGTGCTCAGTGAGACCAATGACAAGGAGGTACATAGATTTTATCCTCCAGGAAAAATCATGCATATATTAACTTCCACCATAGAGGAAACAGTCAGTGCCGAAGAGTCGAGCGTGCCTCATGAAGATGACACGACCGGTGATTC GGACACC AGAATAGGCATCTTCTTGACCCCAAGGTCATTAT ATGGC AAACTGAGGCTTTCAAAAATGATGATTAACGAT CAT TACATGCCTATAT ATAGAAGAAATATTGAGCAGTTGATCGCTGAGCTTGAGAAGGATTCGTCATTCCCAGTCAGTGATTGTCTTGACAGTGAAGTT CCCT AGTTTGACACATACATATATGTAGTTCCAGCTGTTGTAAACGCTGATGCAATAGAATGATAGTTTCGTTAAGTGTATCTAACATCCTCTGGAATAATTACAGAATTCTCAGGTCCCTAATCACAAGGCACCACAAACGTTGCCCTATTTCTTACAAACTCAAGGACCATTTCTGTTACGCAAAGAAATTTCTACCTTTTTTTCGTTTAGAGGATGTGAAATTATTTAAGGGATTAGCTATACAACTTTGAACGGAAAATTTCCCTAAAATCTATTAAATGTA] [+] EMBL BI807137 [ gGCCGAAGATTCGAGCGTGCCTCATGAAGATGACACGACCGGTGATTCAGGACACCAAGAATAGGCATCTTCTTGACCCCAAGGTCATTATGATGGCAAAACTGAGGCTTTCAAAATGGATGATTAACGATGCATGTACATGCCTATATGATAGAAGAAATATTGAGCAGTTGATCGCTGAGCTTGAGAAGGATTCGTCATTCCCAGTCAGTGATTGTCTTGACAGTGAAGTTGCCCTGAGTTTGACACATACATATATGTAGTTCCAGCTGTTGTAAACGCTGATGCAATAGAATGATAGTTTCGTTAAGTGTATCTAACATCCTCTGGAATAATTACAGAATTCTCAGGTCCCTAATCACAAGGCACCACAAACG TGCCCTATTTCGTAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||