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Oryza sativa
cluster # 2288 cluster # 2288       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2288#0 length = 926 sequences # 2  

consensusID : consensus_2288#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 926
fasta sequence
                              [ACTGGCTCAGCTGTTCTGGTCTTGAGCTCTTCTTCCTCAACATATATCACAGTCGTCTGAAGTCTTAACAGCTCTTGAACTACAGGAGAAGTTCAGAGAAAACTTACAATGGGGGCATCGCCGTCGCGAGAAGAGGCGCATTCCAACTCTTCTTTCTCTGGGAACGGCAAAGCCATGGCGGTGGCAAGCAGCGCTTCCAGTTCTGGTAGCAACCAGGCCCAATCAAAGAGAGCACCAGCTCTTCACATGTTCCAAGAGATTGTTGCCGAGAAGGATTTTACTGCATCTTCACTGGAAGATCAGATCTACACCGGCATCTTCTTGGCAGGGAAAACAAAGAAGTACTGGGTGGATGAGAGAACTAGGAACAACTGCTTCATGCTGTTTCCCAGAGGCTTGTCTATCACTTGGAGTGAAGACCCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGGAAGCAGTGATGCTGACACTGACACCCAGATCGAAGTGCCGTCGCTGCAGAACGTCTGCTGGTTAGAGATCCATGGGAAGCTTGAACGGTCCTATCTTACACCAGGAGTCACCTATGAGGTTCTCTTTGAAGTAATGCTTATTGATCCTGCATACGGGTGGTCTGTCCCAGTGAACCTTCAGCTCAAGTTCCCTGATGGAACAGTCCAGCAGCGTAAAGAGAATCTTGAGGAGAAGATCAGGATGAAATGGCTGGAGCTCAAGGTCGGGGGGGTGAAAACCCAGCAGGGGCAGAAGGGAGAGATTGAGATATCCATGTTTTGAGTATGATGGTGGGCTGTGGAAGAGAGGGCTACTAATCAAGGGAATCAAGATTCTCCCAAAACAATGATGTGTTACTCTTCGATGATCATTGATCATTAGCTATATTTTGTCAGTTATGTTAAGATCCACACAAAGTATCAGAATAATGT]

[+] EMBL AK102322             [ACTGGCTCAGCTGTTCTGGTCTTGAGCTCTTCTTCCTCAACATATATCACAGTCGTCTGAAGTCTTAACAGCTCTTGAACTACAGGAGAAGTTCAGAGAAAACTTACAATGGGGGCATCGCCGTCGCGAGAAGAGGCGCATTCCAACTCTTCTTTCTCTGGGAACGGCAAAGCCATGGCGGTGGCAAGCAGCGCTTCCAGTTCTGGTAGCAACCAGGCCCAATCAAAGAGAGCACCAGCTCTTCACATGTTCCAAGAGATTGTTGCCGAGAAGGATTTTACTGCATCTTCACTGGAAGATCAGATCTACACCGGCATCTTCTTGGCAGGGAAAACAAAGAAGTACTGGGTGGATGAGAGAACTAGGAACAACTGCTTCATGCTGTTTCCCAGAGGCTTGTCTATCACTTGGAGTGAAGACCCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGGAAGCAGTGATGCTGACACTGACACCCAGATCGAAGTGCCGTCGCTGCAGAACGTCTGCTGGTTAGAGATCCATGGGAAGCTTGAACGGTCCTATCTTACACCAGGAGTCACCTATGAGGTTCTCTTTGAAGTAATGCTTATTGATCCTGCATACGGGTGGTCTGTCCCAGTGAACCTTCAGCTCAAGTTCCCTGATGGAACAGTCCAGCAGCGTAAAGAGAATCTTGAGGAGAAGATCAGGATGAAATGGCTGGAGCTCAAGGTCGGGGGGGTGAAAACCCAGCAGGGGCAGAAGGGAGAGATTGAGATATCCATGTTTTGAGTATGATGGTGGGCTGTGGAAGAGAGGGCTACTAATCAAGGGAATCAAGATTCTCCCAAAACAATGATGTGTTACTCTTCGATGATCATTGATCATTAGCTATATTTTGTCAGTTATGTTAAGATCCACACAAAGTATCAGAATAATG ]
[+] EMBL AK063812             [                                                                           TGAACTACAGGAGAAGTTCAGAGAAAACTTACAATGGGGGCATCGCCGTCGCGAGAAGAGGCGCATTCCAACTCTTCTTTCTCTGGGAACGGCAAAGCCATGGCGGTGGCAAGCAGCGCTTCCAGTTCTGGTAGCAACCAGGCCCAATCAAAGAGAGCACCAGCTCTTCACATGTTCCAAGAGATTGTTGCCGAGAAGGATTTTACTGCATCTTCACTGGAAGATCAGATCTACACCGGCATCTTCTTGGCAGGGAAAACAAAGAAGTACTGGGTGGATGAGAGAACTAGGAACAACTGCTTCATGCTGTTTCCCAGAGGCTTGTCTATCACTTGGAGTGAAGACCCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGGAAGCAGTGATGCTGACACTGACACCCAGATCGAAGTGCCGTCGCTGCAGAACGTCTGCTGGTTAGAGATCCATGGGAAGCTTGAACGGTCCTATCTTACACCAGGAGTCACCTATGAGGTTCTCTTTGAAGTAATGCTTATTGATCCTGCATACGGGTGGTCTGTCCCAGTGAACCTTCAGCTCAAGTTCCCTGATGGAACAGTCCAGCAGCGTAAAGAGAATCTTGAGGAGAAGATCAGGATGAAATGGCTGGAGCTCAAGGTCGGGGAGGTGAAAACCCAGCAGGGGCAGAAGGGAGAGATTGAGATATCCATG TTTGAGTATGATGGTGGGCTGTGGAAGAGAGGGCTACTAATCAAGGGAATCAAGATTCTCCCAAAACAATGATGTGTTACTCTTCGATGATCATTGATCATTAGCTATATTTTGTCAGTTATGTTAAGATCCACACAAAGTATCAGAATAATGT]


>consensus_2288#0 ACTGGCTCAGCTGTTCTGGTCTTGAGCTCTTCTTCCTCAACATATATCACAGTCGTCTGA AGTCTTAACAGCTCTTGAACTACAGGAGAAGTTCAGAGAAAACTTACAATGGGGGCATCG CCGTCGCGAGAAGAGGCGCATTCCAACTCTTCTTTCTCTGGGAACGGCAAAGCCATGGCG GTGGCAAGCAGCGCTTCCAGTTCTGGTAGCAACCAGGCCCAATCAAAGAGAGCACCAGCT CTTCACATGTTCCAAGAGATTGTTGCCGAGAAGGATTTTACTGCATCTTCACTGGAAGAT CAGATCTACACCGGCATCTTCTTGGCAGGGAAAACAAAGAAGTACTGGGTGGATGAGAGA ACTAGGAACAACTGCTTCATGCTGTTTCCCAGAGGCTTGTCTATCACTTGGAGTGAAGAC CCCAGATTCTGGACTTGGAAACCTCTGAAAGAAGGAAGCAGTGATGCTGACACTGACACC CAGATCGAAGTGCCGTCGCTGCAGAACGTCTGCTGGTTAGAGATCCATGGGAAGCTTGAA CGGTCCTATCTTACACCAGGAGTCACCTATGAGGTTCTCTTTGAAGTAATGCTTATTGAT CCTGCATACGGGTGGTCTGTCCCAGTGAACCTTCAGCTCAAGTTCCCTGATGGAACAGTC CAGCAGCGTAAAGAGAATCTTGAGGAGAAGATCAGGATGAAATGGCTGGAGCTCAAGGTC GGGGGGGTGAAAACCCAGCAGGGGCAGAAGGGAGAGATTGAGATATCCATGTTTTGAGTA TGATGGTGGGCTGTGGAAGAGAGGGCTACTAATCAAGGGAATCAAGATTCTCCCAAAACA ATGATGTGTTACTCTTCGATGATCATTGATCATTAGCTATATTTTGTCAGTTATGTTAAG ATCCACACAAAGTATCAGAATAATGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)