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Oryza sativa
cluster # 2297 cluster # 2297       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2297#0 length = 1465 sequences # 2  

consensusID : consensus_2297#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1465
fasta sequence
                              [CCATACTGGGCAGCCGGTCGAGAGCGCAAAAGGAAATCAGTCCGCGCTAACCACATTGATCAAGCTGAATCAGGCAAAGGCATTCCTAAACATGGATACTGTCATGACGATTAAGAGGCAGATAGAGGAGGAGAAAGGATCACTTGAAAAAACTCGTGAGAGGTTACAGTTGAACAGAGCGAAGGCTTCATCACTTGAAGCAGACTTAAACAAAATTGTTTCACAGTTACAAGCAGCAAGAGGCCCCAAACCTACTCTTGAACCTTCTGATATCTGGTTGCAGATGAAACAGTTAAATTCAGAGAAAGAGAAACACAGGAAGATTGCTGATGACTCGAAGAATGAGATTGGCGAATTAACCGCCACGATTGAGCACACAAAGTCCAGGACGAAGACCCTACAATTCAGGATTGTCATGGCTGAAAAATTGAAGGAAGCCTCAAGGCGCGGAGAAGCTCTTGCTCTTGCAGAGAGAAAGAACCTGAGCAATGGGGAGCACGAGGCCAGTACCGCATCCGATGTCACACTTTCTGTCGAAGAACACTCAGTGCTGGTGCAAAAAGCAGAAGAAGCAGATGCCGCGTGTAGGAAGAAAATCGACGCGGCAATGCAAGAGCTGGATCAAGCAAACCGGGGCAAACTGGAACTCTTGGAAAGAGTAGAGGAGGCAATGGCTGCAGTTGAGACCAGCAGGAAGGCTTTGGAGGAAGCCCTAAAGAGGGAGGAATCCACGAACAAAGCGAAGCTCGTAGCCGAAGAATCACTCAGAAAGCTGAGGTCCGAGCAAATCATCCAGAATTGGCGGCCCACCGGCAACAGCTCCGTCAAATTCAAGACCTCAGCAGCGACGACGGCGGCGGTGGTGGCTCACCGGAGAGCCGGCTCCGGGATCTACGACGTGAACGGGCTGAGCCTGGTGACGGCGACGCCCAAGAGCACGAAGGCGATGTCCATCGGGCAGATCCTGAGCATGAAGCTGGACCACCGGGAGCTCGAGGTCGCCGGCAAGGGCGGCGACGCCAAGAAGAAGGTGTCGCTGGGGCAGATCCTGAGCCAGAAGTACGACGCCCTGTCGCCGCTGAGGATCGATCACGGCGGCGCGTCGCGCAGGCAGTTCCACCCCAGGAGGAGGAAGCTGGGGTTCGTCGTGTACGCGCTGCTCCTCGCCAAGCACAGGCACAGGAAGAAGAGGCAGCCCGCCGCCGCCGCCGCCGCCGACTCCTCCTCTTGCACCCATGGCAGCTTCAGCACCAAGGCTGTGTATTAATTAGCAACATTTTTTTTTTCTTCTGGATCAATGAGTAGTAGCTATGCAGTGTAATAGTACAGACTTATGAATAATCAGCATGTGTAATTAGTTAGTTCTATGCACAAAGTTGAAATTCAGCAGCTACTCCAGGTTGTAAGTATGTACAAACATCTACTGTTCTTGCGGTTTCGAGAGAAATTTCAACCGCGGCGATGA]

[+] EMBL AK064010             [CCATACTGGGCAGCCGGTCGAGAGCGCAAAAGGAAATCAGTCCGCGCTAACCACATTGATCAAGCTGAATCAGGCAAAGGCATTCCTAAACATGGATACTGTCATGACGATTAAGAGGCAGATAGAGGAGGAGAAAGGATCACTTGAAAAAACTCGTGAGAGGTTACAGTTGAACAGAGCGAAGGCTTCATCACTTGAAGCAGACTTAAACAAAATTGTTTCACAGTTACAAGCAGCAAGAGGCCCCAAACCTACTCTTGAACCTTCTGATATCTGGTTGCAGATGAAACAGTTAAATTCAGAGAAAGAGAAACACAGGAAGATTGCTGATGACTCGAAGAATGAGATTGGCGAATTAACCGCCACGATTGAGCACACAAAGTCCAGGACGAAGACCCTACAATTCAGGATTGTCATGGCTGAAAAATTGAAGGAAGCCTCAAGGCGCGGAGAAGCTCTTGCTCTTGCAGAGAGAAAGAACCTGAGCAATGGGGAGCACGAGGCCAGTACCGCATCCGATGTCACACTTTCTGTCGAAGAACACTCAGTGCTGGTGCAAAAAGCAGAAGAAGCAGATGCCGCGTGTAGGAAGAAAATCGACGCGGCAATGCAAGAGCTGGATCAAGCAAACCGGGGCAAACTGGAACTCTTGGAAAGAGTAGAGGAGGCAATGGCTGCAGTTGAGACCAGCAGGAAGGCTTTGGAGGAAGCCCTAAAGAGGGAGGAATCCACGAACAAAGCGAAGCTCGTAGCCGAAGAATCACTCAGAAAGCTGAGGTCCGAGCAAATCATCCAGAATTGGCGGCCCACCGGCAACAGCTCCGTCAAATTCAAGACCTCAGCAGCGACGACGGCGGCGGTGGTGGCTCACCGGAGAGCCGGCTCCGGGATCTACGACGTGAACGGGCTGAGCCTGGTGACGGCGACGCCCAAGAGCACGAAGGCGATGTCCATCGGGCAGATCCTGAGCATGAAGCTGGACCACCGGGAGCTCGAGGTCGCCGGCAAGGGCGGCGACGCCAAGAAGAAGGTGTCGCTGGGGCAGATCCTGAGCCAGAAGTACGACGCCCTGTCGCCGCTGAGGATCGATCACGGCGGCGCGTCGCGCAGGCAGTTCCACCCCAGGAGGAGGAAGCTGGGGTTCGTCGTGTACGCGCTGCTCCTCGCCAAGCACAGGCACAGGAAGAAGAGGCAGCCCGCCGCCGCCGCCGCCGCCGACTCCTCCTCTTGCACCCATGGCAGCTTCAGCACCAAGGCTGTGTATTAATTAGCAACATTTTTTTTTTCTTCTGGATCAATGAGTAGTAGCTATGCAGTGTAATAGTACAGACTTATGAATAATCAGCATGTGTAATTAGTTAGTTCTATGCACAAAGTTGAAATTCAGCAGCTACTCCAGGTTGTAAGTATGTACAAACATCTACTGTTCTTGCGGTTTCGAGAGAAATTTCAACCGCGGCGATGA]
[+] EMBL AK102615             [CCATACTGGGCAGCCGGTCGAGAGCGCAAAAGGAAATCAGTCCGCGCTAACCACATTGATCAAGCTGAATCAGGCAAAGGCATTCCTAAACATGGATACTGTCATGACGATTAAGAGGCAGATAGAGGAGGAGAAAGGATCACTTGAAAAAACTCGTGAGAGGTTACAGTTGAACAGAGCGAAGGCTTCATCACTTGAAGCAGACTTAAACAAAATTGTTTCACAGTTACAAGCAGCAAGAGGCCCCAAACCTACTCTTGAACCTTCTGATATCTGGTTGCAGATGAAACAGTTAAATTCAGAGAAAGAGAAACACAGGAAGATTGCTGATGACTCGAAGAATGAGATTGGCGAATTAACCGCCACGATTGAGCACACAAAGTCCAGGACGAAGACCCTACAATTCAGGATTGTCATGGCTGAAAAATTGAAGGAAGCCTCAAGGCGCGGAGAAGCTCTTGCTCTTGCAGAGAGAAAGAACCTGAGCAATGGGGAGCACGAGGCCAGTACCGCATCCGATGTCACACTTTCTGTCGAAGAACACTCAGTGCTGGTGCAAAAAGCAGAAGAAGCAGATGCCGCGTGTAGGAAGAAAATCGACGCGGCAATGCAAGAGCTGGATCAAGCAAACCGGGGCAAACTGGAACTCTTGGAAAGAGTAGAGGAGGCAATGGCTGCAGTTGAGACCAGCAGGAAGGCTTTGGAGGAAGCCCTAAAGAGGGAGGAATCCACGAACAAAGCGAAGCTCGTAGCCGAAGAATCACTCAGAAAGCTGAGGTCCGAGCAAATCATCCAGAATTGGCGGCCGACCGGCAACAGCTCCGTCAAATTCAAGACCTCAGCAGCGACGACGGCGGCGGTGGTGGCTCACCGGAGAGCCGGCTCCGGGATCTACGACGTGAACGGGCTGAGCCTGGTGACGGCGACGCCCAAGAGCACGAAGGCGATGTCCATCGGGCAGATCCTGAGCATGAAGCTGGACCACCGGGAGCTCGAGGTCGCCGGCAAGGGCGGCGGCGCCAAGAAGAAGGTGTCGCTGGGGCAGATCCTGAGCCAGAAGTACGACGCCCTGTCGCCGCTGAGGATCGATCACGGCGGCGCGTCGCGCAGGCAGTTCCACCCCAGGAGGAGGAAGCTGGGGTTCGTCGTGTACGCGCTGCTCCTCGCCAAGCACAGGCACAGGAAGAAGAGGCAGCCCGCCGCCGCCGCCGCCGCCGACTCCTCCTCTTGCACCCATGGCAGCTTCAGCACCAAGGCTGTGTATTAATTAGCAACA TTTTTTTTTCTTCTGGATCAATGAGTAGTAGCTATGCAGTGTAATAGTACAGACTTATGAATAATCAGCATGTGTAATTAGTTAGTTCTATGCACAAA                                                                                          ]


>consensus_2297#0 CCATACTGGGCAGCCGGTCGAGAGCGCAAAAGGAAATCAGTCCGCGCTAACCACATTGAT CAAGCTGAATCAGGCAAAGGCATTCCTAAACATGGATACTGTCATGACGATTAAGAGGCA GATAGAGGAGGAGAAAGGATCACTTGAAAAAACTCGTGAGAGGTTACAGTTGAACAGAGC GAAGGCTTCATCACTTGAAGCAGACTTAAACAAAATTGTTTCACAGTTACAAGCAGCAAG AGGCCCCAAACCTACTCTTGAACCTTCTGATATCTGGTTGCAGATGAAACAGTTAAATTC AGAGAAAGAGAAACACAGGAAGATTGCTGATGACTCGAAGAATGAGATTGGCGAATTAAC CGCCACGATTGAGCACACAAAGTCCAGGACGAAGACCCTACAATTCAGGATTGTCATGGC TGAAAAATTGAAGGAAGCCTCAAGGCGCGGAGAAGCTCTTGCTCTTGCAGAGAGAAAGAA CCTGAGCAATGGGGAGCACGAGGCCAGTACCGCATCCGATGTCACACTTTCTGTCGAAGA ACACTCAGTGCTGGTGCAAAAAGCAGAAGAAGCAGATGCCGCGTGTAGGAAGAAAATCGA CGCGGCAATGCAAGAGCTGGATCAAGCAAACCGGGGCAAACTGGAACTCTTGGAAAGAGT AGAGGAGGCAATGGCTGCAGTTGAGACCAGCAGGAAGGCTTTGGAGGAAGCCCTAAAGAG GGAGGAATCCACGAACAAAGCGAAGCTCGTAGCCGAAGAATCACTCAGAAAGCTGAGGTC CGAGCAAATCATCCAGAATTGGCGGCCCACCGGCAACAGCTCCGTCAAATTCAAGACCTC AGCAGCGACGACGGCGGCGGTGGTGGCTCACCGGAGAGCCGGCTCCGGGATCTACGACGT GAACGGGCTGAGCCTGGTGACGGCGACGCCCAAGAGCACGAAGGCGATGTCCATCGGGCA GATCCTGAGCATGAAGCTGGACCACCGGGAGCTCGAGGTCGCCGGCAAGGGCGGCGACGC CAAGAAGAAGGTGTCGCTGGGGCAGATCCTGAGCCAGAAGTACGACGCCCTGTCGCCGCT GAGGATCGATCACGGCGGCGCGTCGCGCAGGCAGTTCCACCCCAGGAGGAGGAAGCTGGG GTTCGTCGTGTACGCGCTGCTCCTCGCCAAGCACAGGCACAGGAAGAAGAGGCAGCCCGC CGCCGCCGCCGCCGCCGACTCCTCCTCTTGCACCCATGGCAGCTTCAGCACCAAGGCTGT GTATTAATTAGCAACATTTTTTTTTTCTTCTGGATCAATGAGTAGTAGCTATGCAGTGTA ATAGTACAGACTTATGAATAATCAGCATGTGTAATTAGTTAGTTCTATGCACAAAGTTGA AATTCAGCAGCTACTCCAGGTTGTAAGTATGTACAAACATCTACTGTTCTTGCGGTTTCG AGAGAAATTTCAACCGCGGCGATGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)