cluster # 2309

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Oryza sativa
cluster # 2309 cluster # 2309 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2309#0 length = 1175 sequences # 2

consensusID : consensus_2309#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1175
fasta sequence

                              [TTTAGCCTCGGCTAGATGAAAGTTATAATTTATCTTATCCTCATCGTCGTATCCTTCAACAGAATAACCATTATAAGAACTAAGAATAACCCATTAAGGGTAACTATTGAAAGAGCAACTTATATGAAGGACCATCGAACCTATTTCGAATTCAGATCCTCTGATTGAGTCTAACCCGAGCGTCAATTTCGACATTTCGAACGACGGTACTCAAGTAGATGTTTTTTGAAATTGAGGACGACATTTAGTTGTCCTTGGTCTTCATGTACTTGATAAGGGCGACAACACGGTTGCTGTAACCGTATTCGTTGTCGTACCAGGCAACAAGCTTCACGAAAGTGGGCGAGAGAGAAATTCCGGCCTTAGCGTCAAAGATCGAAGAGTGAGTGTCTCCGAGGAAGTCAGTGGAGACGACTTCATCTTCGGTGTATCCGAGAACTCCCTTCCATTGATCAGAGTTGGCAGCGGCCTTAACAGCGGCCTTGATTTGATCATAGGTGGCATCCTTGCCGAGACGAACGGTGAGATCGACGACAGACACATCAGGAGTAGGCACACGGAAAGCCATACCGGTAAGTTTTCCGTTAAGTTCGGGGATGACTTTTCCGACAGCCTTGGCAGCTCCAGTTGAAGAGGGGATGATGTTTTGGGCAGCACCACGTCCTCCACGCCAGTCCTTCTTGGAGGGACCATCGACGGTCTTCTGGGTGGCAGTAGCGGCATGAACGGTGGTCATGAGACCCTCAACAATGGTGAAGTTGTCGTGGATGACTTTAGCCAAAGGAGCCAAGCAGTTGGTGGTGCAGGAGGCGTTTGAAACAATGTTCATTCCCGGCTCATACTTCTCGTGGTTGACGCCCATGACGAACATGGGAGCGTCGGGGGATGGGGCAGAGATAATGACTTTCTTGGCACCAGCCTTTCGGTGAGCCTCAGCCTTCTCGAGAGTGGTGAACACTCCGGTCGATTCGACAACGTATTCAGCTCCAGCCTTAGCCCAGGGAATGTTAGAGGGGTCGGACTCTTGGAAGACTTGGATTTTCTTGCCGTTGACGACAAGCATGCCTCCCTCCTCATGAGCGTCACCCTTGAAACGGCCGTGAGTCGAATCATACTTGAACATGTATACCATGTAAGTGACATCGATGAAAGGATCGTTGATGGCTACCACGTCG]

[+] EMBL CB653000             [TTTAGCCTCGGCTAGATGAAAGTTATAATTTATCTTATCCTCATCGTCGTATCCTTCAACAGAATAACCATTATAAGAACTAAGAATAACCCATTAAGGGTAACTATTGAAAGAGCAACTTATATGAAGGACCATCGAACCTATTTCGAATTCAGATCCTCTGATTGAGTCTAACCCGAGCGTCAATTTCGACATTTCGAACGACGGTACTCAAGTAGATGTTTTTTGAAATTGAGGACGACATTTAGTTGTCCTTGGTCTTCATGTACTTGATAAGGGCGACAACACGGTTGCTGTAACCGTATTCGTTGTCGTACCAGGCAACAAGCTTCACGAAAGTGGGCGAGAGAGAAATTCCGGCCTTAGCGTCAAAGATCGAAGAGTGAGTGTCTCCGAGGAAGTCAGTGGAGACGACTTCATCTTCGGTGTATCCGAGAACTCCCTTCCATTGATCAGAGTTGGCAGCGGCCTTAACAGCGGCCTTGATTTGATCATAGGTGGCATCCTTGCCGAGACGAACGGTGAGATCGACGACAGACACATCAGGAGTAGGCACACGGAAAGCCATACCGGTAAGTTTTCCGTTAAGTTCGGGGATGACTTTTCCGACAGCCTTGGCAGCTCCAGTTGAAGAGGGGATGATGTTTTGGGCAGCACCACGTCCTCCACGCCAGTCCTTCTTGGAGGGACCATCGACGGTCTTCTGGGTGGCAGTAGCGGCATGAACGGTGGTCATGAGACCCTCAACAATGGTGAAGTTGTCGTGGATGACTTTAGCCAAAGGAGCCAAGCAGTTGGTGGTGCAGGAGGCGTTTGAAACAATGTTCATTCCCGG                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB652999             [                                                                                                                                                                                                                                                                                                                                                                                                                      GGAGACGACTTCATCTTCGGTGTATCCGAGAACTCCCTTCCATTGATCAGAGTTGGCAGCGGCCTTAACAGCGGCCTTGATTTGATCATAGGTGGCATCCTTGCCGAGACGAACGGTGAGATCGACGACAGACACATCAGGAGTAGGCACACGGAAAGCCATACCGGTAAGTTTTCCGTTAAGTTCGGGGATGACTTTTCCGACAGCCTTGGCAGCTCCAGTTGAAGAGGGGATGATGTTTTGGGCAGCACCACGTCCTCCACGCCAGTCCTTCTTGGAGGGACCATCGACGGTCTTCTGGGTGGCAGTAGCGGCATGAACGGTGGTCATGAGACCCTCAACAATGGTGAAGTTGTCGTGGATGACTTTAGCCAAAGGAGCCAAGCAGTTGGTGGTGCAGGAGGCGTTTGAAACAATGTTCATTCCCGGCTCATACTTCTCGTGGTTGACGCCCATGACGAACATGGGAGCGTCGGGGGATGGGGCAGAGATAATGACTTTCTTGGCACCAGCCTTTCGGTGAGCCTCAGCCTTCTCGAGAGTGGTGAACACTCCGGTCGATTCGACAACGTATTCAGCTCCAGCCTTAGCCCAGGGAATGTTAGAGGGGTCGGACTCTTGGAAGACTTGGATTTTCTTGCCGTTGACGACAAGCATGCCTCCCTCCTCATGAGCGTCACCCTTGAAACGGCCGTGAGTCGAATCATACTTGAACATGTATACCATGTAAGTGACATCGATGAAAGGATCGTTGATGGCTACCACGTCG]




>consensus_2309#0
TTTAGCCTCGGCTAGATGAAAGTTATAATTTATCTTATCCTCATCGTCGTATCCTTCAAC
AGAATAACCATTATAAGAACTAAGAATAACCCATTAAGGGTAACTATTGAAAGAGCAACT
TATATGAAGGACCATCGAACCTATTTCGAATTCAGATCCTCTGATTGAGTCTAACCCGAG
CGTCAATTTCGACATTTCGAACGACGGTACTCAAGTAGATGTTTTTTGAAATTGAGGACG
ACATTTAGTTGTCCTTGGTCTTCATGTACTTGATAAGGGCGACAACACGGTTGCTGTAAC
CGTATTCGTTGTCGTACCAGGCAACAAGCTTCACGAAAGTGGGCGAGAGAGAAATTCCGG
CCTTAGCGTCAAAGATCGAAGAGTGAGTGTCTCCGAGGAAGTCAGTGGAGACGACTTCAT
CTTCGGTGTATCCGAGAACTCCCTTCCATTGATCAGAGTTGGCAGCGGCCTTAACAGCGG
CCTTGATTTGATCATAGGTGGCATCCTTGCCGAGACGAACGGTGAGATCGACGACAGACA
CATCAGGAGTAGGCACACGGAAAGCCATACCGGTAAGTTTTCCGTTAAGTTCGGGGATGA
CTTTTCCGACAGCCTTGGCAGCTCCAGTTGAAGAGGGGATGATGTTTTGGGCAGCACCAC
GTCCTCCACGCCAGTCCTTCTTGGAGGGACCATCGACGGTCTTCTGGGTGGCAGTAGCGG
CATGAACGGTGGTCATGAGACCCTCAACAATGGTGAAGTTGTCGTGGATGACTTTAGCCA
AAGGAGCCAAGCAGTTGGTGGTGCAGGAGGCGTTTGAAACAATGTTCATTCCCGGCTCAT
ACTTCTCGTGGTTGACGCCCATGACGAACATGGGAGCGTCGGGGGATGGGGCAGAGATAA
TGACTTTCTTGGCACCAGCCTTTCGGTGAGCCTCAGCCTTCTCGAGAGTGGTGAACACTC
CGGTCGATTCGACAACGTATTCAGCTCCAGCCTTAGCCCAGGGAATGTTAGAGGGGTCGG
ACTCTTGGAAGACTTGGATTTTCTTGCCGTTGACGACAAGCATGCCTCCCTCCTCATGAG
CGTCACCCTTGAAACGGCCGTGAGTCGAATCATACTTGAACATGTATACCATGTAAGTGA
CATCGATGAAAGGATCGTTGATGGCTACCACGTCG

clustalw multiple alignements is not computed in this case