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Oryza sativa
cluster # 2321 cluster # 2321       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2321#0 length = 1479 sequences # 2  

consensusID : consensus_2321#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1479
fasta sequence
                              [CAAACTAGCAACCCTAAGATACACTTGAGAATATTTTTAAATAACTCGAGAGGAACTGAAGTTGTTATGAACTACCTGGCAAAGATGCGGAAAGAAGTTGGCAAGAAGATAAATTTGCGGTCTGCCCAAACAAATGCAGCATTTCGGAAACTCTTTAACCTCCCACCGGAAGAGTTTCTCATCGATGATTTTACCTGCCATCTAAAACGAAAGATGCCACTTCAGGGGCGCCTCTTCTTTTCACCAAGAATTATTGGATTTTATTCCAACATATTTGGTCACAAGACCAAGTTTTTCTTTTTGTGGGATGATGTTGACGATATCCAAGTTATCCCTCCCACCCTGTCAATTGGTAGCCCATCCTTGACGATCATCCTCCGAAAGGGTAGAGGTTTAGAAGCAAAACATGGTGCCAAGGGAACAGATCCTAATGGAAGACTCAAATACTATTTTCAGTCCTTTGTTTCATTCAATGATGCCCATAGAATAATCATGGCAATTTGGAAAATGCGATCACTGAGTCCAGAACAGCAGGGGGATATGATCGAAAAAGAGTCCGATACCAAAGAACTCCAGCTCGAAGAAGGTGGAACCTTATTTACCCATGAAGATGTCAAAATGTCTGAAATATTCTCATCGGCCCTCTCTGTTGATGTCGAGTCCCTGATGGAGATGTTTTCAGGAGGGCCTTTGGAACACAGAATGATGCAAAAAGCTGGTTGTATTGACTACTCGCCAACAGAATGGGAACTTGTAAGCCGAAATATATACCAGCGGCAAATCAGCTACAAGTTTGACAAAAACTTGTCAAGATATGGAGGAGAAGCAACCACCACTCAGCAGAGGTATGCCCTAGTGAACCAAGAAGGCTGGGCCATTGAAGAGGTGATGAGCCTACAAGGTGTTCTACTGGGGGACTGCTTCAATGTTCAGATGAAGTACACTGTGGTGAATGTACCGTCAAAACCGAACACTTGCAGTGTGCAGGTTTTGTTGGGGATAGCCTGGTTAAAGAGCACTAAGCAACAAAAGAAGATCACGAAGAGTGTCATTTCCAATTCATCCATTAGATTGAAGGAGCTCTTTGCTGAAGTAGAGAAGGATCTTACATCGAGAAGCGGGGCAAGCTGACATCTGCACAAACTAACAGTAGATTGTTCATTGCAACAACCAAATGTGTTTGAAGAGACCAGTATACATGGAGCAATTTGGGAGAACTGTGGCTGTTTGCCTGCGGTTGACTGGTTTCAGCTTTGTCAACATTCTTGCTGGTAGAGTTAATACACAGATGGCAAAGCCAAAAAAAGAAAAAGAAAAAAAAAAGAAGTGTGACATCAATGTGAATAGATTGTTCAAAAACACTTTTTTTCTTAAACATTCCTGATATGATCTTACCTTCATAGGAAGTGAAGTAGAGTTGTATACTTGTATATGCACAGCTGACCAATGTTATACAAACGATATAGTAAAAGGAATCTA]

[+] EMBL AK070879             [CAAACTAGCAACCCTAAGATACACTTGAGAATATTTTTAAATAACTCGAGAGGAACTGAAGTTGTTATGAACTACCTGGCAAAGATGCGGAAAGAAGTTGGCAAGAAGATAAATTTGCGGTCTGCCCAAACAAATGCAGCATTTCGGAAACTCTTTAACCTCCCACCGGAAGAGTTTCTCATCGATGATTTTACCTGCCATCTAAAACGAAAGATGCCACTTCAGGGGCGCCTCTTCTTTTCACCAAGAATTATTGGATTTTATTCCAACATATTTGGTCACAAGACCAAGTTTTTCTTTTTGTGGGATGATGTTGACGATATCCAAGTTATCCCTCCCACCCTGTCAATTGGTAGCCCATCCTTGACGATCATCCTCCGAAAGGGTAGAGGTTTAGAAGCAAAACATGGTGCCAAGGGAACAGATCCTAATGGAAGACTCAAATACTATTTTCAGTCCTTTGTTTCATTCAATGATGCCCATAGAATAATCATGGCAATTTGGAAAATGCGATCACTGAGTCCAGAACAGCAGGGGGATATGATCGAAAAAGAGTCCGATACCAAAGAACTCCAGCTCGAAGAAGGTGGAACCTTATTTACCCATGAAGATGTCAAAATGTCTGAAATATTCTCATCGGCCCTCTCTGTTGATGTCGAGTCCCTGATGGAGATGTTTTCAGGAGGGCCTTTGGAACACAGAATGATGCAAAAAGCTGGTTGTATTGACTACTCGCCAACAGAATGGGAACTTGTAAGCCGAAATATATACCAGCGGCAAATCAGCTACAAGTTTGACAAAAACTTGTCAAGATATGGAGGAGAAGCAACCACCACTCAGCAGAGGTATGCCCTAGTGAACCAAGAAGGCTGGGCCATTGAAGAGGTGATGAGCCTACAAGGTGTTCTACTGGGGGACTGCTTCAATGTTCAGATGAAGTACACTGTGGTGAATGTACCGTCAAAACCGAACACTTGCAGTGTGCAGGTTTTGTTGGGGATAGCCTGGTTAAAGAGCACTAAGCAACAAAAGAAGATCACGAAGAGTGTCATTTCCAATTCATCCATTAGATTGAAGGAGCTCTTTGCTGAAGTAGAGAAGGATCTTACATCGAGAAGCGGGGCAAGCTGACATCTGCACAAACTAACAGTAGATTGTTCATTGCAACAACCAAATGTGTTTGAAGAGACCAGTATACATGGAGCAATTTGGGAGAACTGTGGCTGTTTGCCTGCGGTTGACTGGTTTCAGCTTTGTCAACATTCTTGCTGGTAGAGTTAATACACAGATGGCAAAGCCAAAAAAAGAAAAAGAAAAAAAAAAGAAGTGTGACATCAATGTGAATAGATTGTTCAAAAACACTTTTTTTCTTAAACATTCCTGATATGATCTTACCTTCATAGGAAGTGAAGTAGAGTTGTATACTTGTATATGCACAGCTGACCAATGTTATACAAACGATATAGTAAAAGGAATCTA]
[-] EMBL CA762004             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTCTGAAATATTCTCATCGGCCCTCTCTGTTGATGTCGAGTCCCTGATGGGGATG TTTCAGGAGGGCCTTTGGACCACAGAATGATGCAAAAAGCTGGTTGTATTGACTACTCGCCAACAGAATGGGAACTTGTAAGCCGAAATATATACCAGCGGCAAATCAGCTACAAGTTTGACAAAAACTTGTCAAGATATGGAGGAGAAGCAACCACCACTCAGCAGAGGTATGCCCTAGTGAACCAAGAAGGCTGGGCCATTGAAGAGGTGATGAGCCTACAAGGTGTTCTACTGGGGGACTGCTTCAATGTTCAGATGAAGTACACTGTGGTGAATGTACCGTCAAAACCGAACACTTGCAGTGTGCAGGTTTTGTTGGGGATAGCCTGGTTAAAGAGCACTAAGCAACAAAAGAAGATCACGAAGAGTGTCATTTCCAATTCATCCATTAGATTGAAGGAGCTCTTTGCTGAAGTAGAGAAGGATCTTACATCGAGAAGCGGGGCAAGCTGACATCTGCACAAACTAACAGTAGATTGTTCATTGCAACAACCAAATGTGTTTGAAGAGACCAGTATACATGGAGCAATTTGGGAGAACTGTGGCTGTTTGCCTGCGGTTGACTGGTTTCAGCTTTGTCAACATTCTTGCTGGTAGAGTTAATACACAGATGGCAAAGCCAAAAAAAAAAAAAa                                                                                                                                                                      ]


>consensus_2321#0 CAAACTAGCAACCCTAAGATACACTTGAGAATATTTTTAAATAACTCGAGAGGAACTGAA GTTGTTATGAACTACCTGGCAAAGATGCGGAAAGAAGTTGGCAAGAAGATAAATTTGCGG TCTGCCCAAACAAATGCAGCATTTCGGAAACTCTTTAACCTCCCACCGGAAGAGTTTCTC ATCGATGATTTTACCTGCCATCTAAAACGAAAGATGCCACTTCAGGGGCGCCTCTTCTTT TCACCAAGAATTATTGGATTTTATTCCAACATATTTGGTCACAAGACCAAGTTTTTCTTT TTGTGGGATGATGTTGACGATATCCAAGTTATCCCTCCCACCCTGTCAATTGGTAGCCCA TCCTTGACGATCATCCTCCGAAAGGGTAGAGGTTTAGAAGCAAAACATGGTGCCAAGGGA ACAGATCCTAATGGAAGACTCAAATACTATTTTCAGTCCTTTGTTTCATTCAATGATGCC CATAGAATAATCATGGCAATTTGGAAAATGCGATCACTGAGTCCAGAACAGCAGGGGGAT ATGATCGAAAAAGAGTCCGATACCAAAGAACTCCAGCTCGAAGAAGGTGGAACCTTATTT ACCCATGAAGATGTCAAAATGTCTGAAATATTCTCATCGGCCCTCTCTGTTGATGTCGAG TCCCTGATGGAGATGTTTTCAGGAGGGCCTTTGGAACACAGAATGATGCAAAAAGCTGGT TGTATTGACTACTCGCCAACAGAATGGGAACTTGTAAGCCGAAATATATACCAGCGGCAA ATCAGCTACAAGTTTGACAAAAACTTGTCAAGATATGGAGGAGAAGCAACCACCACTCAG CAGAGGTATGCCCTAGTGAACCAAGAAGGCTGGGCCATTGAAGAGGTGATGAGCCTACAA GGTGTTCTACTGGGGGACTGCTTCAATGTTCAGATGAAGTACACTGTGGTGAATGTACCG TCAAAACCGAACACTTGCAGTGTGCAGGTTTTGTTGGGGATAGCCTGGTTAAAGAGCACT AAGCAACAAAAGAAGATCACGAAGAGTGTCATTTCCAATTCATCCATTAGATTGAAGGAG CTCTTTGCTGAAGTAGAGAAGGATCTTACATCGAGAAGCGGGGCAAGCTGACATCTGCAC AAACTAACAGTAGATTGTTCATTGCAACAACCAAATGTGTTTGAAGAGACCAGTATACAT GGAGCAATTTGGGAGAACTGTGGCTGTTTGCCTGCGGTTGACTGGTTTCAGCTTTGTCAA CATTCTTGCTGGTAGAGTTAATACACAGATGGCAAAGCCAAAAAAAGAAAAAGAAAAAAA AAAGAAGTGTGACATCAATGTGAATAGATTGTTCAAAAACACTTTTTTTCTTAAACATTC CTGATATGATCTTACCTTCATAGGAAGTGAAGTAGAGTTGTATACTTGTATATGCACAGC TGACCAATGTTATACAAACGATATAGTAAAAGGAATCTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)