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Oryza sativa
cluster # 2325 cluster # 2325       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2325#0 length = 1644 sequences # 2  

consensusID : consensus_2325#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1644
fasta sequence
                              [CGCCTGCGTTTCTCCGATTTCTCCCCCCTCCGTCCTCCTCTCGCCGTCGCTGCCTCGCCTCCGGCCCGCGCCACCGGAGCCCGGCGAGGCCGCCGGGCGCGCGCCGCTCGCTCCGCCCCCGCTGGAACCTCCGACTCCGCAGCTACTCCCCCGGCGAGCGTCGCCTTTTTTGCGGCGCGCCGTCGGCCGTAGCGTTCCACCCGGGCCCGGACTTCTGGGGATGCAATGCCTCTCTTAAAAAGGAGACCGTTCTTCTTACTGGATCCGCCAAAGGACTTGAATCCAGAGGACAAGGTGTTCCAAGTTCGGTATACCAAGGAGATATTCCGAGATTACCAGGAATACCTGAATAGGGTAAACCTTTATCGTGAAAGAGTTTGGACATGTAAGGTGTCTGGAAAATCAAATTTAACATATGAGGAAGCGCTGGTCTCAGAGCATCATGCTGCAGAGAAGGCTCAACAGTTGCCAAGAGAGTTAATAGCGCCTGTTCTACATATGATTCAATACATATTCTCCAAGAAGACTTTTTTGAAGGATTAGAACTAAATGGTAGAAAAGATGGTTCTGTGTATGCTTGCAAGATCTTAAAGGTTATTATTGGCTCTGGTAACACCAAGATGTATGAGGTGGGTTGGATTGGTCAGGACAATGCAGAGACTAACACTTCAGTTCTTCAAGCCGATGATCTAGTAATTCGCAAGAAGGCACGTGCTAGTCGTAGCATGCTGAAAATATATATTAGGGAGTCAACATCACAGAATTCCCCATGGATTATACATGCAAATCTTGCAAAGAAATATGGAATACCCACTGAGCCCCCAAAAGACTTATTGAATGGTCAAGGGTTGCCAAAACTGAGGAGAGGACTCGAGAATGGAACCACAGATGATGTCAGAAAAAAATTGAAGAAAGGTGAGCCAATTGATGATCTTTTATTAAGGCCTACAGCAGATGATCCCAGTCTGTCAAAAAGACGTCCACTGTCTACAGATTTCAGAGTGCCTGTAGATTCTGTTGGGGATCTACTTATGGTTTGGGACTTCTGCATGACTTACGGGAGGATTTTATGCTTGTCTCCATTTTCCCTCTCGGACCTGGAGAATGCGATCTGCCACAAAGAAAGCAACCTTGTTCTTCTTGTGGAATTACATGCTGCACTCTTCCATTTGCTCATTAAAGATGGAAGCGGGTATTTTATGTTTCTCCAGAACAAGAGAAGGAAATTAAAGGTAACATTGGTCACCTGGGCTGAGTATCTATGTGATTTCTTGGAAATGACAAGTAAAGAAGAATTCTCCAGTAGTTTATCAACTGTAAGAAGGGGGCATTATGGACTTGTTCACACTGCCGTGAAGCTTAAAATTCTGCGGGAACTGGTAGATGAAGCCATAACAACTTCTGCTGTAAGACAGAATATAGATGAAAAGATTGACCAGCAACAAGCTATTGCAGCATCAAAAAGAGAGCTTGCTAGAAATAAAAAGGAAGAGCATAAGCTGGCCATGGAAGGGGTGACAGAAAAGGAAATGAGTCAGACAGATGCTGCAGAAAATGTCAACGGGAATGTAAATGGTCAGGTTGTGGAAAAAGAAGGAAAGGAGAAGAAAAACATTTATGCCAACAAGATGGGAGAGGGGAAAG]

[+] EMBL AK101745             [CGCCTGCGTTTCTCCGATTTCTCCCCCCTCCGTCCTCCTCTCGCCGTCGCTGCCTCGCCTCCGGCCCGCGCCACCGGAGCCCGGCGAGGCCGCCGGGCGCGCGCCGCTCGCTCCGCCCCCGCTGGAACCTCCGACTCCGCAGCTACTCCCCCGGCGAGCGTCGCCTTTTTTGCGGCGCGCCGTCGGCCGTAGCGTTCCACCCGGGCCCGGACTTCTGGGGATGCAATGCCTCTCTTAAAAAGGAGACCGTTCTTCTTACTGGATCCGCCAAAGGACTTGAATCCAGAGGACAAGGTGTTCCAAGTTCGGTATACCAAGGAGATATTCCGAGATTACCAGGAATACCTGAATAGGGTAAACCTTTATCGTGAAAGAGTTTGGACATGTAAGGTGTCTGGAAAATCAAATTTAACATATGAGGAAGCGCTGGTCTCAGAGCATCATGCTGCAGAGAAGGCTCAACAGTTGCCAAGAGAGTTAATAGCGCCTGTTCTACATATGATTCAATACATATTCTCCAAGAAGACTTTTTTGAAGGATTAGAACTAAATGGTAGAAAAGATGGTTCTGTGTATGCTTGCAAGATCTTAAAGGTTATTATTGGCTCTGGTAACACCAAGATGTATGAGGTGGGTTGGATTGGTCAGGACAATGCAGAGACTAACACTTCAGTTCTTCAAGCCGATGATCTAGTAATTCGCAAGAAGGCACGTGCTAGTCGTAGCATGCTGAAAATATATATTAGGGAGTCAACATCACAGAATTCCCCATGGATTATACATGCAAATCTTGCAAAGAAATATGGAATACCCACTGAGCCCCCAAAAGACTTATTGAATGGTCAAGGGTTGCCAAAACTGAGGAGAGGACTCGAGAATGGAACCACAGATGATGTCAGAAAAAAATTGAAGAAAGGTGAGCCAATTGATGATCTTTTATTAAGGCCTACAGCAGATGATCCCAGTCTGTCAAAAAGACGTCCACTGTCTACAGATTTCAGAGTGCCTGTAGATTCTGTTGGGGATCTACTTATGGTTTGGGACTTCTGCATGACTTACGGGAGGATTTTATGCTTGTCTCCATTTTCCCTCTCGGACCTGGAGAATGCGATCTGCCACAAAGAAAGCAACCTTGTTCTTCTTGTGGAATTACATGCTGCACTCTTCCATTTGCTCATTAAAGATGGAAGCGGGTATTTTATGTTTCTCCAGAACAAGAGAAGGAAATTAAAGGTAACATTGGTCACCTGGGCTGAGTATCTATGTGATTT                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BF430587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GACGTCCACTGTCTACAGATTTCAGAGTGCCTGTAGATTCTGTTGGGGATCTACTTATGGTTTGGGACTTCTGCATGACTTACGGGAGGATTTTATGCTTGTCTCCATTTTCCCTCTCGGACCTGGAGAATGCAATCTGCCACAAAGAAAGCAACCTTGTTCTTCTTGTGGAATTACATGCTGCACTCTTCCATTTGCTCATTAAAGATGGAGGCGGGTATTTTATGTTTCTCCAGAACAAGAGAAGGAAATTAAAGGTAACATTGGTCACCTGGGCTGAGTATCTATGTGATTTCTTGGAAATGACAAGTAAAGAAGAATTCTCCAGTAGTTTATCAACTGTAAGAAGGGGGCATTATGGACTTGTTCACACTGCCGTGAAGCTTAAAATTCTGCGGGAACTGGTAGATGAAGCCATAACAACTTCTGCTGTAAGACAGAATATAGATGAAAAGATTGACCAGCAACAAGCTATTGCAGCATCAAAAAGAGAGCTTGCTAGAAATAAAAAGGAAGAGCATAAGCTGGCCATGGAAGGGGTGACAGAAAAGGAAATGAGTCAGACAGATGCTGCAGAAAATGTCAACGGGAATGTAAATGGTCAGGTTGTGGAAAAAGAAGGAAAGGAGAAGAAAAACATTTATGCCAACAAGATGGGAGAGGGGAAAG]


>consensus_2325#0 CGCCTGCGTTTCTCCGATTTCTCCCCCCTCCGTCCTCCTCTCGCCGTCGCTGCCTCGCCT CCGGCCCGCGCCACCGGAGCCCGGCGAGGCCGCCGGGCGCGCGCCGCTCGCTCCGCCCCC GCTGGAACCTCCGACTCCGCAGCTACTCCCCCGGCGAGCGTCGCCTTTTTTGCGGCGCGC CGTCGGCCGTAGCGTTCCACCCGGGCCCGGACTTCTGGGGATGCAATGCCTCTCTTAAAA AGGAGACCGTTCTTCTTACTGGATCCGCCAAAGGACTTGAATCCAGAGGACAAGGTGTTC CAAGTTCGGTATACCAAGGAGATATTCCGAGATTACCAGGAATACCTGAATAGGGTAAAC CTTTATCGTGAAAGAGTTTGGACATGTAAGGTGTCTGGAAAATCAAATTTAACATATGAG GAAGCGCTGGTCTCAGAGCATCATGCTGCAGAGAAGGCTCAACAGTTGCCAAGAGAGTTA ATAGCGCCTGTTCTACATATGATTCAATACATATTCTCCAAGAAGACTTTTTTGAAGGAT TAGAACTAAATGGTAGAAAAGATGGTTCTGTGTATGCTTGCAAGATCTTAAAGGTTATTA TTGGCTCTGGTAACACCAAGATGTATGAGGTGGGTTGGATTGGTCAGGACAATGCAGAGA CTAACACTTCAGTTCTTCAAGCCGATGATCTAGTAATTCGCAAGAAGGCACGTGCTAGTC GTAGCATGCTGAAAATATATATTAGGGAGTCAACATCACAGAATTCCCCATGGATTATAC ATGCAAATCTTGCAAAGAAATATGGAATACCCACTGAGCCCCCAAAAGACTTATTGAATG GTCAAGGGTTGCCAAAACTGAGGAGAGGACTCGAGAATGGAACCACAGATGATGTCAGAA AAAAATTGAAGAAAGGTGAGCCAATTGATGATCTTTTATTAAGGCCTACAGCAGATGATC CCAGTCTGTCAAAAAGACGTCCACTGTCTACAGATTTCAGAGTGCCTGTAGATTCTGTTG GGGATCTACTTATGGTTTGGGACTTCTGCATGACTTACGGGAGGATTTTATGCTTGTCTC CATTTTCCCTCTCGGACCTGGAGAATGCGATCTGCCACAAAGAAAGCAACCTTGTTCTTC TTGTGGAATTACATGCTGCACTCTTCCATTTGCTCATTAAAGATGGAAGCGGGTATTTTA TGTTTCTCCAGAACAAGAGAAGGAAATTAAAGGTAACATTGGTCACCTGGGCTGAGTATC TATGTGATTTCTTGGAAATGACAAGTAAAGAAGAATTCTCCAGTAGTTTATCAACTGTAA GAAGGGGGCATTATGGACTTGTTCACACTGCCGTGAAGCTTAAAATTCTGCGGGAACTGG TAGATGAAGCCATAACAACTTCTGCTGTAAGACAGAATATAGATGAAAAGATTGACCAGC AACAAGCTATTGCAGCATCAAAAAGAGAGCTTGCTAGAAATAAAAAGGAAGAGCATAAGC TGGCCATGGAAGGGGTGACAGAAAAGGAAATGAGTCAGACAGATGCTGCAGAAAATGTCA ACGGGAATGTAAATGGTCAGGTTGTGGAAAAAGAAGGAAAGGAGAAGAAAAACATTTATG CCAACAAGATGGGAGAGGGGAAAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)