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Oryza sativa
cluster # 2337 cluster # 2337       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2337#0 length = 1748 sequences # 2  

consensusID : consensus_2337#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1748
fasta sequence
                              [AGATGGCGGCTGCGACGGCGGCGGCGGGAGCAGCCGCCGCCGTATCCCTGCTCGCGTGCTACCTCCTCCTACACAGGGACGGCGCCAAGCTGCCGTGGGTCGGGCCCACGACGAGGTCCTCCCGCTCGAGCGGCCGGCGGACGCGGCGGAAGGGCCTCGTGGAGGCCATCGGAAACACGCCCCTCATCCGCATCAACAGCCTCTCCGACGCCACAGGGTGCGAGATCCTGGGGAAGGCCGAGTTCTTGAATCCCGGAGGCAGCGTGAAGGACCGTGTGGCAGTTAAGATCATCGAAGAGGCTCTGGAATCTGGTGATCTTCTCTGTGGTGGTACAGTAACAGAGGGGAGTGCTGGAAGCACAGCTATTAGCTTGGCCATTGTTGCTCCTGCTTATGGCTGCAAATGTCATGTTGTTATTCCTGATGATGCTGCCATTGAGAAGTCTCAAATAATCGAGGCGCTCGGGGCTACAGTTGAACGAGTGCGCCCTGTTTCAATTACACATAGGGACCATTTTGTCAATATTGCTAGAAGAAGGGCTTTAGAAGCAAACAAATCAGCAGCGGCCCAGAGAGAGTCAAGGTACAAAGAAACTAATGGTTCAGCGCATGTCAATACTAGAATAATGCACAGCAAGATAACAGCAAGCAAAGGGGAGTCAAACAAGGCACTAACTAACTGTTCAGCCAATTCTGAAATACAATATAACGGGAAGTGTGATCATGACTCTGATTCAAAGGGAGGTTTCTTTGCTGACCAATTTGAGAATATGGCAAACTACCGAGCCCATTATGAATGGACTGGTCCTGAGATATGGCAACAAAGTAAAGGGACACTGCATGCCTTTGTTGCTGCAGCTGGCACTGGTGGCACAATTGCTGGAGTCTCACGGTATCTTAAGGAAAAGAACACAAACATCAAATGCTTCTTAATGGACCCACCTGGATCTGGTCTGTTCAATAAGGTTACTAGAGGGGTGATGTACACAAAAGAGGAAGCTGAGGGCAAAAGGCTGAAGAATCCTTTTGACACTATTACTGAAGGAATTGGAATCAACAGGGTTACAAAAAATTTTATGATGGCGGAACTGGATGGAGCTTACCGGGGAACAGATAGGGAAGCTGTTGAGATGTCAAGGTTCTTGTTGAAAAATGATGGGCTGTTCGTTGGGAGTTCTTCAGCCATGAATTGTGTTGGTGCTGTAAGAGTTGCTCAAGATTTAGGTCCAGGACATACAATTGTGACAATTCTCTGTGACAGTGGGATGAGGCATCTAAGTAAGTTCTTCAATGACCAATATTTGGCTAACCATGGCCTGACACCAACAGCTACCGGTCTGGAATTTCTTGATTGATGAGAAAATTTCATGGGGAATATACAGTCTCAGCAAGTTTTTCATGATGTGATGTCTGCCCTGATAGCTGGTGAATACTGACGAGCTGGAACATAGCAGATCTCATCCAGCAAGAGAACTGCTTGCATCTCTGGATTGGTACAAAAATTTTGTCGTACGGCTTTAAGTTATCCTCAAAATACATTGTGATGTATTTTAATTAGCTGGCATTGCCATTGATAGGGGCTGGTATAGCCAAACCTGCATTTCTTGTAGTTTTGGCATATTTCATTAGGATGTATTCAGTAAACTGTAAAAGGATGTTTTTTTCCCACTGAATCTTATATTAGTGTTTTTTGGCTAAGAGA-CTGGGAATTTGTTCGGGAGATCATTAAAAAATCAAGCAAAAAAGGG]

[+] EMBL AK071308             [AGATGGCGGCTGCGACGGCGGCGGCGGGAGCAGCCGCCGCCGTATCCCTGCTCGCGTGCTACCTCCTCCTACACAGGGACGGCGCCAAGCTGCCGTGGGTCGGGCCCACGACGAGGTCCTCCCGCTCGAGCGGCCGGCGGACGCGGCGGAAGGGCCTCGTGGAGGCCATCGGAAACACGCCCCTCATCCGCATCAACAGCCTCTCCGACGCCACAGGGTGCGAGATCCTGGGGAAGGCCGAGTTCTTGAATCCCGGAGGCAGCGTGAAGGACCGTGTGGCAGTTAAGATCATCGAAGAGGCTCTGGAATCTGGTGATCTTCTCTGTGGTGGTACAGTAACAGAGGGGAGTGCTGGAAGCACAGCTATTAGCTTGGCCATTGTTGCTCCTGCTTATGGCTGCAAATGTCATGTTGTTATTCCTGATGATGCTGCCATTGAGAAGTCTCAAATAATCGAGGCGCTCGGGGCTACAGTTGAACGAGTGCGCCCTGTTTCAATTACACATAGGGACCATTTTGTCAATATTGCTAGAAGAAGGGCTTTAGAAGCAAACAAATCAGCAGCGGCCCAGAGAGAGTCAAGGTACAAAGAAACTAATGGTTCAGCGCATGTCAATACTAGAATAATGCACAGCAAGATAACAGCAAGCAAAGGGGAGTCAAACAAGGCACTAACTAACTGTTCAGCCAATTCTGAAATACAATATAACGGGAAGTGTGATCATGACTCTGATTCAAAGGGAGGTTTCTTTGCTGACCAATTTGAGAATATGGCAAACTACCGAGCCCATTATGAATGGACTGGTCCTGAGATATGGCAACAAAGTAAAGGGACACTGCATGCCTTTGTTGCTGCAGCTGGCACTGGTGGCACAATTGCTGGAGTCTCACGGTATCTTAAGGAAAAGAACACAAACATCAAATGCTTCTTAATGGACCCACCTGGATCTGGTCTGTTCAATAAGGTTACTAGAGGGGTGATGTACACAAAAGAGGAAGCTGAGGGCAAAAGGCTGAAGAATCCTTTTGACACTATTACTGAAGGAATTGGAATCAACAGGGTTACAAAAAATTTTATGATGGCGGAACTGGATGGAGCTTACCGGGGAACAGATAGGGAAGCTGTTGAGATGTCAAGGTTCTTGTTGAAAAATGATGGGCTGTTCGTTGGGAGTTCTTCAGCCATGAATTGTGTTGGTGCTGTAAGAGTTGCTCAAGATTTAGGTCCAGGACATACAATTGTGACAATTCTCTGTGACAGTGGGATGAGGCATCTAAGTAAGTTCTTCAATGACCAATATTTGGCTAACCATGGCCTGACACCAACAGCTACCGGTCTGGAATTTCTTGATTGATGAGAAAATTTCATGGGGAATATACAGTCTCAGCAAGTTTTTCATGATGTGATGTCTGCCCTGATAGCTGGTGAATACTGACGAGCTGGAACATAGCAGATCTCATCCAGCAAGAGAACTGCTTGCATCTCTGGATTGGTACAAAAATTTTGTCGTACGGCTTTAAGTTATCCTCAAAATACATTGTGATGTATTTTAATTAGCTGGCATTGCCATTGATAGGGGCTGGTATAGCCAAACCTGCATTTCTTGTAGTTTTGGCATATTTCATTAGGATGTATTCAGTAAACTGTAAAAGGATGTTTTTTTCCCACTGAATCTTATATTAGTGTTTTTTGGCTAAGAGA CTGGGAATTTGTTCGGGAGATCATT                     ]
[-] EMBL CB657014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAAGAATCCTTTTGACACTATTACTGAAGGAATTGGAATCAACAGGGTTACAAAAAATTTTATGATGGCGGAACTGGATGGAGCTTACCGGGGAACAGATAGGGAAGCTGTTGAGATGTCAAGGTTCTTGTTGAAAAATGATGGGCTGTTCGTTGGGAGTTCTTCAGCCATGAATTGTGTTGGTGCTGTAAGAGTTGCTCAAGATTTAGGTCCAGGACATACAATTGTGACAATTTTCTGTGACAGTGGGATGAGGCATCTAAGTAAGTTTTTCAATGACCAATATTTGGCTAACCATGGCCTGACACCAACAGCTACCGGTTTGGAATTTTTTGATTGATGAGAAAATTTCATGGGGAATATACAGTCTCAGCAAGTTTTTCATGATGTGATGTCTGCCCTGATAGCTGGTGAATACTGACGAGCTGGAACATAGCAGATTTCATCCAGCAAGAGAACTGCTTGCATTTTTGGATTGGTACAAAAATTTTGTCGTACGGCTTTAAGTTATCCTCAAAATACATTGTGATGTATTTTAATTAGCTGGCATTGCCATTGATAGGGGCTGGTATAGCCAAACCTGCATTTCTTGTAGTTTTGGCATATTTCATTAGGATGTATTCAGTAAACTGTAAAAGGATGTTTTTTTCCCACTGAATCTTATATTAGTGTTTTTTGGCTAAGAGAGGGGGGAATTTGTTTGGGCGATAAAAAAAAAATCAAGCAAAAAAGGG]


>consensus_2337#0 AGATGGCGGCTGCGACGGCGGCGGCGGGAGCAGCCGCCGCCGTATCCCTGCTCGCGTGCT ACCTCCTCCTACACAGGGACGGCGCCAAGCTGCCGTGGGTCGGGCCCACGACGAGGTCCT CCCGCTCGAGCGGCCGGCGGACGCGGCGGAAGGGCCTCGTGGAGGCCATCGGAAACACGC CCCTCATCCGCATCAACAGCCTCTCCGACGCCACAGGGTGCGAGATCCTGGGGAAGGCCG AGTTCTTGAATCCCGGAGGCAGCGTGAAGGACCGTGTGGCAGTTAAGATCATCGAAGAGG CTCTGGAATCTGGTGATCTTCTCTGTGGTGGTACAGTAACAGAGGGGAGTGCTGGAAGCA CAGCTATTAGCTTGGCCATTGTTGCTCCTGCTTATGGCTGCAAATGTCATGTTGTTATTC CTGATGATGCTGCCATTGAGAAGTCTCAAATAATCGAGGCGCTCGGGGCTACAGTTGAAC GAGTGCGCCCTGTTTCAATTACACATAGGGACCATTTTGTCAATATTGCTAGAAGAAGGG CTTTAGAAGCAAACAAATCAGCAGCGGCCCAGAGAGAGTCAAGGTACAAAGAAACTAATG GTTCAGCGCATGTCAATACTAGAATAATGCACAGCAAGATAACAGCAAGCAAAGGGGAGT CAAACAAGGCACTAACTAACTGTTCAGCCAATTCTGAAATACAATATAACGGGAAGTGTG ATCATGACTCTGATTCAAAGGGAGGTTTCTTTGCTGACCAATTTGAGAATATGGCAAACT ACCGAGCCCATTATGAATGGACTGGTCCTGAGATATGGCAACAAAGTAAAGGGACACTGC ATGCCTTTGTTGCTGCAGCTGGCACTGGTGGCACAATTGCTGGAGTCTCACGGTATCTTA AGGAAAAGAACACAAACATCAAATGCTTCTTAATGGACCCACCTGGATCTGGTCTGTTCA ATAAGGTTACTAGAGGGGTGATGTACACAAAAGAGGAAGCTGAGGGCAAAAGGCTGAAGA ATCCTTTTGACACTATTACTGAAGGAATTGGAATCAACAGGGTTACAAAAAATTTTATGA TGGCGGAACTGGATGGAGCTTACCGGGGAACAGATAGGGAAGCTGTTGAGATGTCAAGGT TCTTGTTGAAAAATGATGGGCTGTTCGTTGGGAGTTCTTCAGCCATGAATTGTGTTGGTG CTGTAAGAGTTGCTCAAGATTTAGGTCCAGGACATACAATTGTGACAATTCTCTGTGACA GTGGGATGAGGCATCTAAGTAAGTTCTTCAATGACCAATATTTGGCTAACCATGGCCTGA CACCAACAGCTACCGGTCTGGAATTTCTTGATTGATGAGAAAATTTCATGGGGAATATAC AGTCTCAGCAAGTTTTTCATGATGTGATGTCTGCCCTGATAGCTGGTGAATACTGACGAG CTGGAACATAGCAGATCTCATCCAGCAAGAGAACTGCTTGCATCTCTGGATTGGTACAAA AATTTTGTCGTACGGCTTTAAGTTATCCTCAAAATACATTGTGATGTATTTTAATTAGCT GGCATTGCCATTGATAGGGGCTGGTATAGCCAAACCTGCATTTCTTGTAGTTTTGGCATA TTTCATTAGGATGTATTCAGTAAACTGTAAAAGGATGTTTTTTTCCCACTGAATCTTATA TTAGTGTTTTTTGGCTAAGAGACTGGGAATTTGTTCGGGAGATCATTAAAAAATCAAGCA AAAAAGGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)