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Oryza sativa
cluster # 2370 cluster # 2370       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2370#0 length = 2367 sequences # 2  

consensusID : consensus_2370#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2367
fasta sequence
                              [GGAAGCATATGGAGAACCTTACTGAAGCAATATTCAATGCTACAACTACAGTCAAAGCATGTTGAGGAACTCAAGGCTGATATTAGAGCTACAAAAGCTGGCATGGAGTTTATGCAAATGAAGTACTCCGAGGACATCAACATCTTAGGAAGGCATCTGTTTAGCCTTGCACATGCTGCCTCAGGTTATCATATAGTTCTTGAAGAAAATCGCAAGCTGTACAACCAAGTGCAAGATCTTAAAGGGAGTATCAGGGTATATTGTAGAGTACGACCCTTTTTACCTGGACAAGTAAGTTCTTGTGCTGTGGGTTCAATTGATGAGGGCAATATAACCATCATCACTCCTTCCAAGTCTGGAAAGGAAGGTCGAAAGACTTTTAGCTTCAACAAGGTGTTTGGCCCTTCAGCAACACAAGATGAGGTGTTCTTAGATACCCAGCCCCTTATTCGCTCAGTACTTGATGGATACAACGTTTGCATCTTTGCTTATGGCCAGACCGGTTCAGGGAAGACATATACAATGAGTGGGCCCAAGAACATGACTGAGCAAACCCAGGGTGTAAATTATCGGGCACTAAGTGATCTATTTAAGCTTGCCGAACAAAGGAAAGGAGCATTCATTTATGATATTGCTGTGCAAATGATACAGATTTATAATGACCAAGTCAGGGACCTCCTTGCCAATGATGGTCTGAACAAAAGATTAGAGATTCGAAATAATTCTCAGAATGGACTTAATGTGCCGGATGCAAGCCTTGTCTGTGTCGCATCAACAATGGACGTGATGGAATTGATGAATGTTGGGCAGAAGAACCGTGCAGTCGGCGCCACTGCACTAAATGACCGGAGCAGTCGTTCCCACAGTTGCTTAACCGTACATGTTCAAGGAAGAGATTTGACATCAGGGACCATTCTTCGTGGCTGCATGCACTTAGTTGATCTCGCAGGCAGTGAGCGGGTTGATAAGTCAGAGGTCACTGGAGAAAGGTTAAAAGAAGCACAACATATAAACAAATCATTGTCGGCTTTAGGGGATGTGATTGCTTCACTTGCCCAAAAGAATGCGCATGTACCTTACAGGAATAGTAAATTAACACAACTCCTGCAAGATTCTCTTGGAGGTCAGGCCAAAACCTTGATGTTTGTTCATATAAGCCCAGAAAGTGATGCTTTAGGAGAAAGCATAAGCACATTGAAGTTTGCCGAGCGTGTATCCACTGTTGAACTTGGCGCTGCTCGGTTGAACAAAGAGTCTGGAGAAGTTAAAGAACTTAAGGAGCAGATTGCTCGACTCAAATCATCATTAGCAATGAAAGATTCAGGATCAGAGCAAAACATTAACCGTGACCCTGAGGCATTTAACATGAAGATGCCTTCACCTGGCTTTTCAAATAGGCGACAGGGTAGTTGTGAGTTGGTGTCTAGCCAAACTAACTTCAGACAACCAATGGAGGACGTTGGAAACATAGAGGTTAGAGCCAATCCAACATTAAGACAGAAGAAACCAAGCTTTGATCTCCAGGACTTATTAGCGTCAAATGATTCCCCATCATGGCCAGATAGCATTTCAAGGGCAAATTTTCAAATGGGAGAAGAAAGAGTGACTATTGGTGGGGAATGGATCGATAAGGTTGTAGTGAACAACAATAACTCAGTAGGTGATTGGGAAGGCGACAGTGCAGCTTTACCTGACTTCTTTTACCAAAGGTACCATTCAGGTACAAGAGATAAGCAATACCTGAGAAATAACTCAAGAAAAAAGGACGGAAATGAGTTTGAGCAGCAAAGACCAAGATTTTATTCCACAAATACTGATGATTCTGATGACATTGACATTGCAACAAGTGATTCCTCAGAATCAGATGCACTATGGCAGTTCAATGTCCAAAGCATCAATAGTTCAATTAGCGAGAATGGTTCAAAGATCAAGAAACCACAAACGAAGCTAAGAGAGAGCTCAGATACCAGGACACCACTCCATTCTCAAATACCATCTGCTTCGAGAAAAACCTCCAATGGAAATAGATCTGGACGGCAACCTTTAAGTGGTAGCGATAGCAGAAGGCTCTCATCAAATGGTAGACATGCTGGTACAAAGTAGGGACTACTACAATGATCATGTGCATTTTTTTTTCTTGGCTTTCTTTCAGTGTTTGTCATGAGAGATTGCGAGGTTTTTCTCGAGTACAGCAATGAGTGACAATAAACCCAATTGATTGTCTCAGTGTGGTGAGTTGTGATCCCAACAACTGGTGTGTGAGGCCATTAACCTTTTTTTTTATTTGGCCTATCAGGCTATGTTGAGTTCTTGCTAATTCTTTGTGTATTGTTCATAATATATATAATGAAGAGAAAAGAAAGAGAA]

[+] EMBL CB660469             [GGAAGCATATGGAGAACCTTACTGAAGCAATATTCAATGCTACAACTACAGTCAAAGCATGTTGAGGAACTCAAGGCTGATATTAGAGCTACAAAAGCTGGCATGGAGTTTATGCAAATGAAGTACTCCGAGGACATCAACATCTTAGGAAGGCATCTGTTTAGCCTTGCACATGCTGCCTCAGGTTATCATATAGTTCTTGAAGAAAATCGCAAGCTGTACAACCAAGTGCAAGATCTTAAAGGGAGTATCAGGGTATATTGTAGAGTACGACCCTTTTTACCTGGACAAGTAAGTTCTTGTGCTGTGGGTTCAATTGATGAGGGCAATATAACCATCATCACTCCTTCCAAGTCTGGAAAGGAAGGTCGAAAGACTTTTAGCTTCAACAAGGTGTTTGGCCCTTCAGCAACACAAGATGAGGTGTTCTTAGATACCCAGCCCCTTATTCGCTCAGTACTTGATGGATACAACGTTTGCATCTTTGCTTATGGCCAGACCGGTTCAGGGAAGACATATACAATGAGTGGGCCCAAGAACATGACTGAGCAAACCCAGGGTGTAAATTATCGGGCACTAAGTGATCTATTTAAGCTTGCCGAACAAAGGAAAGGAGCATTCATTTATGATATTGCTGTGCAAATGATACAGATTTATAATGACCAAGTCAGGGACCTCCTTGCCAATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK106465             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGTGATCTATTTAAGCTTGCCGAACAAAGGAAAGGAGCATTCATTTATGATATTGCTGTGCAAATGATAGAGATTTATAATGAGCAAGTCAGGGACCTCCTTGTCAATGATGGTCTGAACAAAAGATTAGAGATTCGAAATAATTCTCAGAATGGACTTAATGTGCCGGATGCAAGCCTTGTCTGTGTCGCATCAACAATGGACGTGATGGAATTGATGAATGTTGGGCAGAAGAACCGTGCAGTCGGCGCCACTGCACTAAATGACCGGAGCAGTCGTTCCCACAGTTGCTTAACCGTACATGTTCAAGGAAGAGATTTGACATCAGGGACCATTCTTCGTGGCTGCATGCACTTAGTTGATCTCGCAGGCAGTGAGCGGGTTGATAAGTCAGAGGTCACTGGAGAAAGGTTAAAAGAAGCACAACATATAAACAAATCATTGTCGGCTTTAGGGGATGTGATTGCTTCACTTGCCCAAAAGAATGCGCATGTACCTTACAGGAATAGTAAATTAACACAACTCCTGCAAGATTCTCTTGGAGGTCAGGCCAAAACCTTGATGTTTGTTCATATAAGCCCAGAAAGTGATGCTTTAGGAGAAAGCATAAGCACATTGAAGTTTGCCGAGCGTGTATCCACTGTTGAACTTGGCGCTGCTCGGTTGAACAAAGAGTCTGGAGAAGTTAAAGAACTTAAGGAGCAGATTGCTCGACTCAAATCATCATTAGCAATGAAAGATTCAGGATCAGAGCAAAACATTAACCGTGACCCTGAGGCATTTAACATGAAGATGCCTTCACCTGGCTTTTCAAATAGGCGACAGGGTAGTTGTGAGTTGGTGTCTAGCCAAACTAACTTCAGACAACCAATGGAGGACGTTGGAAACATAGAGGTTAGAGCCAATCCAACATTAAGACAGAAGAAACCAAGCTTTGATCTCCAGGACTTATTAGCGTCAAATGATTCCCCATCATGGCCAGATAGCATTTCAAGGGCAAATTTTCAAATGGGAGAAGAAAGAGTGACTATTGGTGGGGAATGGATCGATAAGGTTGTAGTGAACAACAATAACTCAGTAGGTGATTGGGAAGGCGACAGTGCAGCTTTACCTGACTTCTTTTACCAAAGGTACCATTCAGGTACAAGAGATAAGCAATACCTGAGAAATAACTCAAGAAAAAAGGACGGAAATGAGTTTGAGCAGCAAAGACCAAGATTTTATTCCACAAATACTGATGATTCTGATGACATTGACATTGCAACAAGTGATTCCTCAGAATCAGATGCACTATGGCAGTTCAATGTCCAAAGCATCAATAGTTCAATTAGCGAGAATGGTTCAAAGATCAAGAAACCACAAACGAAGCTAAGAGAGAGCTCAGATACCAGGACACCACTCCATTCTCAAATACCATCTGCTTCGAGAAAAACCTCCAATGGAAATAGATCTGGACGGCAACCTTTAAGTGGTAGCGATAGCAGAAGGCTCTCATCAAATGGTAGACATGCTGGTACAAAGTAGGGACTACTACAATGATCATGTGCATTTTTTTTTCTTGGCTTTCTTTCAGTGTTTGTCATGAGAGATTGCGAGGTTTTTCTCGAGTACAGCAATGAGTGACAATAAACCCAATTGATTGTCTCAGTGTGGTGAGTTGTGATCCCAACAACTGGTGTGTGAGGCCATTAACCTTTTTTTTTATTTGGCCTATCAGGCTATGTTGAGTTCTTGCTAATTCTTTGTGTATTGTTCATAATATATATAATGAAGAGAAAAGAAAGAGAA]


>consensus_2370#0 GGAAGCATATGGAGAACCTTACTGAAGCAATATTCAATGCTACAACTACAGTCAAAGCAT GTTGAGGAACTCAAGGCTGATATTAGAGCTACAAAAGCTGGCATGGAGTTTATGCAAATG AAGTACTCCGAGGACATCAACATCTTAGGAAGGCATCTGTTTAGCCTTGCACATGCTGCC TCAGGTTATCATATAGTTCTTGAAGAAAATCGCAAGCTGTACAACCAAGTGCAAGATCTT AAAGGGAGTATCAGGGTATATTGTAGAGTACGACCCTTTTTACCTGGACAAGTAAGTTCT TGTGCTGTGGGTTCAATTGATGAGGGCAATATAACCATCATCACTCCTTCCAAGTCTGGA AAGGAAGGTCGAAAGACTTTTAGCTTCAACAAGGTGTTTGGCCCTTCAGCAACACAAGAT GAGGTGTTCTTAGATACCCAGCCCCTTATTCGCTCAGTACTTGATGGATACAACGTTTGC ATCTTTGCTTATGGCCAGACCGGTTCAGGGAAGACATATACAATGAGTGGGCCCAAGAAC ATGACTGAGCAAACCCAGGGTGTAAATTATCGGGCACTAAGTGATCTATTTAAGCTTGCC GAACAAAGGAAAGGAGCATTCATTTATGATATTGCTGTGCAAATGATACAGATTTATAAT GACCAAGTCAGGGACCTCCTTGCCAATGATGGTCTGAACAAAAGATTAGAGATTCGAAAT AATTCTCAGAATGGACTTAATGTGCCGGATGCAAGCCTTGTCTGTGTCGCATCAACAATG GACGTGATGGAATTGATGAATGTTGGGCAGAAGAACCGTGCAGTCGGCGCCACTGCACTA AATGACCGGAGCAGTCGTTCCCACAGTTGCTTAACCGTACATGTTCAAGGAAGAGATTTG ACATCAGGGACCATTCTTCGTGGCTGCATGCACTTAGTTGATCTCGCAGGCAGTGAGCGG GTTGATAAGTCAGAGGTCACTGGAGAAAGGTTAAAAGAAGCACAACATATAAACAAATCA TTGTCGGCTTTAGGGGATGTGATTGCTTCACTTGCCCAAAAGAATGCGCATGTACCTTAC AGGAATAGTAAATTAACACAACTCCTGCAAGATTCTCTTGGAGGTCAGGCCAAAACCTTG ATGTTTGTTCATATAAGCCCAGAAAGTGATGCTTTAGGAGAAAGCATAAGCACATTGAAG TTTGCCGAGCGTGTATCCACTGTTGAACTTGGCGCTGCTCGGTTGAACAAAGAGTCTGGA GAAGTTAAAGAACTTAAGGAGCAGATTGCTCGACTCAAATCATCATTAGCAATGAAAGAT TCAGGATCAGAGCAAAACATTAACCGTGACCCTGAGGCATTTAACATGAAGATGCCTTCA CCTGGCTTTTCAAATAGGCGACAGGGTAGTTGTGAGTTGGTGTCTAGCCAAACTAACTTC AGACAACCAATGGAGGACGTTGGAAACATAGAGGTTAGAGCCAATCCAACATTAAGACAG AAGAAACCAAGCTTTGATCTCCAGGACTTATTAGCGTCAAATGATTCCCCATCATGGCCA GATAGCATTTCAAGGGCAAATTTTCAAATGGGAGAAGAAAGAGTGACTATTGGTGGGGAA TGGATCGATAAGGTTGTAGTGAACAACAATAACTCAGTAGGTGATTGGGAAGGCGACAGT GCAGCTTTACCTGACTTCTTTTACCAAAGGTACCATTCAGGTACAAGAGATAAGCAATAC CTGAGAAATAACTCAAGAAAAAAGGACGGAAATGAGTTTGAGCAGCAAAGACCAAGATTT TATTCCACAAATACTGATGATTCTGATGACATTGACATTGCAACAAGTGATTCCTCAGAA TCAGATGCACTATGGCAGTTCAATGTCCAAAGCATCAATAGTTCAATTAGCGAGAATGGT TCAAAGATCAAGAAACCACAAACGAAGCTAAGAGAGAGCTCAGATACCAGGACACCACTC CATTCTCAAATACCATCTGCTTCGAGAAAAACCTCCAATGGAAATAGATCTGGACGGCAA CCTTTAAGTGGTAGCGATAGCAGAAGGCTCTCATCAAATGGTAGACATGCTGGTACAAAG TAGGGACTACTACAATGATCATGTGCATTTTTTTTTCTTGGCTTTCTTTCAGTGTTTGTC ATGAGAGATTGCGAGGTTTTTCTCGAGTACAGCAATGAGTGACAATAAACCCAATTGATT GTCTCAGTGTGGTGAGTTGTGATCCCAACAACTGGTGTGTGAGGCCATTAACCTTTTTTT TTATTTGGCCTATCAGGCTATGTTGAGTTCTTGCTAATTCTTTGTGTATTGTTCATAATA TATATAATGAAGAGAAAAGAAAGAGAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)