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Oryza sativa
cluster # 2393 cluster # 2393       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2393#0 length = 1099 sequences # 2  

consensusID : consensus_2393#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1099
fasta sequence
                              [AGGCGATGGCCACTTCTCTCGCGCCGTCCACACAATGAGTCCGGCAGCAACTATGGCCGTCCTTCTCCGACCATCCACGCTCCTCCCCTCCTCCCAATCCACGACGACCTCCCGACTCAGATTCCCCGTCGCTACCCCGCTTCCTCGCTGCCGCCATGGCGGCGCCGGCAAGAAGAGCCGCCTCCTGGTCGCAAGAAGAAGGGGGAGGAGAGACCGGGTCGCCTGCCTTCCCACGAAGGAGGAGGAGGAGGAGGAGGTCGGCGTGGCGGGAGACGGTGGGGAGGAGGATGGGGACGAGGACGGGTACCTGGCGAGGGAGGGCGAGTGGGGGGTGCGGCGGATGGGGCGGGTCGGCGAGGAGATGCGGCGGGTGGCGCTCGTCCAGGCCGAGGCCTTCCACATCCCCGTCGCCCTCTTCAACGACTTCTTCTTCGATTTTTTCAAAGCGGAGGTGCTGTCGGCGCTCATCTACAGGGTGAGGAATTCGCCGCCTGACAGATACGCGTGTTTAGTGGCAGAAGAAGTGGATGCAACCAGCCAGATATCTGAGGCGCCATTCGAGAAAATTGTTGGTGTGGTGGACTGCACAGTTCAGAATGAAGCTGACATACTTAAGAACCTCCAAGGCGTCGACGAGTACCTCTATGTGTCAGGAATTGCGGTGTTGCCATCCTTCAGGAGGAGGAAGGTAGGGACTGCGCTGCTGAAAGCCTGCGAGGCGCTGGCGCTCCAGTGGAGGCACAGATTCATGGCGCTGAGGGCTTACAAGGACGACGATGGAGCTCGAGGCCTTTACTCCAAGGCGGGGTACAGGGTGGTGGCAAAGGATCCTGGATGGGTCACCTGGGTGGGAAGGAGACGGCGTGTTCTGATGATAAAGGAGCTGCCTATCCATGAACATCATTTAGAACAGCAATGATATGTTTCTTTGCTTTAGCCATGCATCGATCCCTGTAAATGTATCACTTTTGCTGTGAGTATCACTAGTGCATATGTATGCTTGTTTCTTTGTGGTAATTTGATTCAAGTTTGGTGTAGCATAAATCAATAGTATAGGTGAATGAATGGCTATTAGCAATGACGATCTTTTTGCCAGTGT]

[+] EMBL AK066403             [AGGCGATGGCCACTTCTCTCGCGCCGTCCACACAATGAGTCCGGCAGCAACTATGGCCGTCCTTCTCCGACCATCCACGCTCCTCCCCTCCTCCCAATCCACGACGACCTCCCGACTCAGATTCCCCGTCGCTACCCCGCTTCCTCGCTGCCGCCATGGCGGCGCCGGCAAGAAGAGCCGCCTCCTGGTCGCAAGAAGAAGGGGGAGGAGAGACCGGGTCGCCTGCCTTCCCACGAAGGAGGAGGAGGAGGAGGAGGTCGGCGTGGCGGGAGACGGTGGGGAGGAGGATGGGGACGAGGACGGGTACCTGGCGAGGGAGGGCGAGTGGGGGGTGCGGCGGATGGGGCGGGTCGGCGAGGAGATGCGGCGGGTGGCGCTCGTCCAGGCCGAGGCCTTCCACATCCCCGTCGCCCTCTTCAACGACTTCTTCTTCGATTTTTTCAAAGCGGAGGTGCTGTCGGCGCTCATCTACAGGGTGAGGAATTCGCCGCCTGACAGATACGCGTGTTTAGTGGCAGAAGAAGTGGATGCAACCAGCCAGATATCTGAGGCGCCATTCGAGAAAATTGTTGGTGTGGTGGACTGCACAGTTCAGAATGAAGCTGACATACTTAAGAACCTCCAAGGCGTCGACGAGTACCTCTATGTGTCAGGAATTGCGGTGTTGCCATCCTTCAGGAGGAGGAAGGTAGGGACTGCGCTGCTGAAAGCCTGCGAGGCGCTGGCGCTCCAGTGGAGGCACAGATTCATGGCGCTGAGGGCTTACAAGGACGACGATGGAGCTCGAGGCCTTTACTCCAAGGCGGGGTACAGGGTGGTGGCAAAGGATCCTGGATGGGTCACCTGGGTGGGAAGGAGACGGCGTGTTCTGATGATAAAGGAGCTGCCTATCCATGAACATCATTTAGAACAGCAATGATATGTTTCTTTGCTTTAGCCATGCATCGATCCCTGTAAATGTATCACTTTTGCTGTGAGTATCACTAGTGCATATGTATGCTTGTTTCTTTGTGGTAATTTGATTCAAGTTTGGTGTAGCATAAATCAATAGTATAGGTGAATGAATGGCTATTAGCAATGACGATCTTTTTGCCAGTGT]
[+] EMBL AK104697             [            CTTCTCTCGCGCCGTCCACACAATGAGTCCGGCAGCAACTATGGCCGTCCTTCTCCGACCATCCACGCTCCTCCCCTCCTCCCAATCCACGACGACCTCCCGACTCAGATTCCCCGTCGCTACCCCGCTTCCTCGCTGCCGCCATGGCGGCGCCGGCAAGAAGAGCCGCCTCCTGGTCGCAAGAAGAAGGGGGAGGAGAGACCGGGTCGCCTGCCTTCCCACGAAGGAGGAGGAGGAGGAGGAGGTCGGCGTGGCGGGAGACGGTGGGGAGGAGGATGGGGACGAGGACGGGTACCTGGCGAGGGAGGGCGAGTGGGGGGTGCGGCGGATGGGGCGGGTCGGCGAGGAGATGCGGCGGGTGGCGCTCGTCCAGGCCGAGGCCTTCCACATCCCCGTCGCCCTCTTCAACGACTTCTTCTTCGATTTTTTCAAAGCGGAGGTGCTGTCGGCGCTCATCTACAGGGTGAGGAATTCGCCGCCTGACAGATACGCGTGTTTAGTGGCAGAAGAAGTGGGTGCAACCAGCCAGATATCTGAGGCGCCATTCGAGAAAATTGTTGGTGTGGTGGACTGCACAGTTCAGAATGAAGCTGACATACTTAAGAACCTCCAAGGCGTCGACGAGTACCTCTATGTGTCAGGAATTGCGGTGTTGCCATCCTTCAGGAGGAGGAAGGTAGGGACTGCGCTGCTGAAAGCCTGCGAGGCGCTGGCGCTCCAGTGGAGGCACAGATTCATGGCGCTGAGGGCTTACAAGGACGACGATGGAGCTCGAGGCCTTTACTCCAAGGCGGGGTACAGGGTGGTGGCAAAGGATCCTGGATGGGTCACCTGGGTGGGAAGGAGACGGCGTGTTCTGATGATAAAGGAGCTGCCTATCCATGAACATCATTTAGAACAGCAATGATATGTTTCTTTGCTTTAGCCATGCATCGATCCCTGTAAATGTATCACTTTTGCTGTGAGTATCACTAGTGCATATGTATGCTTGTT                                                                                              ]


>consensus_2393#0 AGGCGATGGCCACTTCTCTCGCGCCGTCCACACAATGAGTCCGGCAGCAACTATGGCCGT CCTTCTCCGACCATCCACGCTCCTCCCCTCCTCCCAATCCACGACGACCTCCCGACTCAG ATTCCCCGTCGCTACCCCGCTTCCTCGCTGCCGCCATGGCGGCGCCGGCAAGAAGAGCCG CCTCCTGGTCGCAAGAAGAAGGGGGAGGAGAGACCGGGTCGCCTGCCTTCCCACGAAGGA GGAGGAGGAGGAGGAGGTCGGCGTGGCGGGAGACGGTGGGGAGGAGGATGGGGACGAGGA CGGGTACCTGGCGAGGGAGGGCGAGTGGGGGGTGCGGCGGATGGGGCGGGTCGGCGAGGA GATGCGGCGGGTGGCGCTCGTCCAGGCCGAGGCCTTCCACATCCCCGTCGCCCTCTTCAA CGACTTCTTCTTCGATTTTTTCAAAGCGGAGGTGCTGTCGGCGCTCATCTACAGGGTGAG GAATTCGCCGCCTGACAGATACGCGTGTTTAGTGGCAGAAGAAGTGGATGCAACCAGCCA GATATCTGAGGCGCCATTCGAGAAAATTGTTGGTGTGGTGGACTGCACAGTTCAGAATGA AGCTGACATACTTAAGAACCTCCAAGGCGTCGACGAGTACCTCTATGTGTCAGGAATTGC GGTGTTGCCATCCTTCAGGAGGAGGAAGGTAGGGACTGCGCTGCTGAAAGCCTGCGAGGC GCTGGCGCTCCAGTGGAGGCACAGATTCATGGCGCTGAGGGCTTACAAGGACGACGATGG AGCTCGAGGCCTTTACTCCAAGGCGGGGTACAGGGTGGTGGCAAAGGATCCTGGATGGGT CACCTGGGTGGGAAGGAGACGGCGTGTTCTGATGATAAAGGAGCTGCCTATCCATGAACA TCATTTAGAACAGCAATGATATGTTTCTTTGCTTTAGCCATGCATCGATCCCTGTAAATG TATCACTTTTGCTGTGAGTATCACTAGTGCATATGTATGCTTGTTTCTTTGTGGTAATTT GATTCAAGTTTGGTGTAGCATAAATCAATAGTATAGGTGAATGAATGGCTATTAGCAATG ACGATCTTTTTGCCAGTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)