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Oryza sativa
cluster # 2407 cluster # 2407       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2407#0 length = 2273 sequences # 1  
consensus_2407#1 length = 2198 sequences # 1  

consensusID : consensus_2407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2273
fasta sequence
                              [AGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCCGGGGCGGCGGAGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCCTCCTCGTCGCCCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCGACGGACTCGTCCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCACCACCGCTTCCCGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATGGGGAGAGACCGTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTGGAAGGATCTTGGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCCTTGCAATGTACAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATTTATTGCTCAGTGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGGGGCCTTTTTACATCAAGTTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATGCATATTGTCAAGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCGCAATCAGGACTATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCAGCCCAGAGCCAGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAGCTCATCTACACTCTGGAGAGCTTGTCGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGACTCTAGATGCACTTTTGTTCCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCGCAAAGATTTACTGGTAGCAGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTATGTTTTAGAGGGAAGGAATGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGGGAATAGCTCCGGAGATGGGACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACGTAAATCTATATTAACTCTAGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCATTGGCAAAGCCAATCTGAACAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAGGCAGCTTCTTGAAGAAGGCTTTTTCCATGCAGACCCCCATCCAGGTAATCTGGTTGCAACTGAAGGTGGATCACTCGCGTATTTTGATTTTGGTATGATGGGGGATATTCCAAGGCACTATCGTGTAGGGCTTATACAAATGCTTGTGCACTATGTTAACCGTGACTCCTTGGGCTTGGCAAATGACTTCCATTCACTTGGGTTTGTCCCTGAGGGAACAGACCTACATGGGGTTGCTGATGCATTACGTGTTTCCTTTGGTGATGGAAGGAGGCAATCAAATGATTTTCAGGGGGTGATGAGCCATCTGTATGATGTCATGTATGAGTTTAATTTCTCTCTTCCTCCGGATTACGCACTGGTGATAAGAGCACTGGGTTCTTTAGAAGGGACTGCAAAAGCATTGGATCCTGACTTCAAAGTTATTGAAAGTGCATACCCATTTGTCATTGGGAGGCTACTTGAAGACCCCAGCCCTGATATGAGGAAAATATTGAGGCAGCTCTTGATATGCGATGATGGATCCATCAGATGGAATCGACTGGAGCGGCTGATTGCAGCTATATCCGAACAGTCAGAATCTTCAAATAAGTCTGAAGATAGATCTGGTGAAAATGCTGCCAACAAACCTGGGTGGAGATCATTCGACATGCATTCTGTGGTTGCAGCTACAGAAGACCTTTTTCATTTCATTTTATCAAGGAAAGGCTGGAGGGTTCGTGTTTTTCTTGTTCAGGACATTGTAAAAGCTTCAGATGCATTCCTACAAGAAGCAACATTTCCAGGTATATTCGATGAAGAGGGGACTACAGGGGAGCTACATCCAGAGAGAAGTAAAATGATAAGAAGGGTGGTACATGGTGTTCAATCATTCCGTCAAGCTATCAGTTTGGCCCCAGATGCCTGGACTGCTATGCTATTCCGTACCTTGTTGAAACCTGAATCCCAGAAATTTATTCTTGATGTCTTTCTAGCCTTGGCAATGCATTCCTGTTACAAGATTCCAGAAACAAGCTGGATTTGTATGTCGAGATTCCTGAATTACTTGGACAGGCAGGGTAGGTAACACAGATAATGGAAATGCAGTCTAA]

[+] EMBL AK066819             [AGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCCGGGGCGGCGGAGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCCTCCTCGTCGCCCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCGACGGACTCGTCCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCACCACCGCTTCCCGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATGGGGAGAGACCGTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTGGAAGGATCTTGGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCCTTGCAATGTACAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATTTATTGCTCAGTGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGGGGCCTTTTTACATCAAGTTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATGCATATTGTCAAGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCGCAATCAGGACTATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCAGCCCAGAGCCAGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAGCTCATCTACACTCTGGAGAGCTTGTCGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGACTCTAGATGCACTTTTGTTCCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCGCAAAGATTTACTGGTAGCAGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTATGTTTTAGAGGGAAGGAATGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGGGAATAGCTCCGGAGATGGGACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACGTAAATCTATATTAACTCTAGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCATTGGCAAAGCCAATCTGAACAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAGGCAGCTTCTTGAAGAAGGCTTTTTCCATGCAGACCCCCATCCAGGTAATCTGGTTGCAACTGAAGGTGGATCACTCGCGTATTTTGATTTTGGTATGATGGGGGATATTCCAAGGCACTATCGTGTAGGGCTTATACAAATGCTTGTGCACTATGTTAACCGTGACTCCTTGGGCTTGGCAAATGACTTCCATTCACTTGGGTTTGTCCCTGAGGGAACAGACCTACATGGGGTTGCTGATGCATTACGTGTTTCCTTTGGTGATGGAAGGAGGCAATCAAATGATTTTCAGGGGGTGATGAGCCATCTGTATGATGTCATGTATGAGTTTAATTTCTCTCTTCCTCCGGATTACGCACTGGTGATAAGAGCACTGGGTTCTTTAGAAGGGACTGCAAAAGCATTGGATCCTGACTTCAAAGTTATTGAAAGTGCATACCCATTTGTCATTGGGAGGCTACTTGAAGACCCCAGCCCTGATATGAGGAAAATATTGAGGCAGCTCTTGATATGCGATGATGGATCCATCAGATGGAATCGACTGGAGCGGCTGATTGCAGCTATATCCGAACAGTCAGAATCTTCAAATAAGTCTGAAGATAGATCTGGTGAAAATGCTGCCAACAAACCTGGGTGGAGATCATTCGACATGCATTCTGTGGTTGCAGCTACAGAAGACCTTTTTCATTTCATTTTATCAAGGAAAGGCTGGAGGGTTCGTGTTTTTCTTGTTCAGGACATTGTAAAAGCTTCAGATGCATTCCTACAAGAAGCAACATTTCCAGGTATATTCGATGAAGAGGGGACTACAGGGGAGCTACATCCAGAGAGAAGTAAAATGATAAGAAGGGTGGTACATGGTGTTCAATCATTCCGTCAAGCTATCAGTTTGGCCCCAGATGCCTGGACTGCTATGCTATTCCGTACCTTGTTGAAACCTGAATCCCAGAAATTTATTCTTGATGTCTTTCTAGCCTTGGCAATGCATTCCTGTTACAAGATTCCAGAAACAAGCTGGATTTGTATGTCGAGATTCCTGAATTACTTGGACAGGCAGGGTAGGTAACACAGATAATGGAAATGCAGTCTAA]


>consensus_2407#0 AGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCCGGGGCGGCGG AGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCCTCCTCGTCGC CCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCGACGGACTCGT CCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCACCACCGCTTCC CGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATGGGGAGAGACC GTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTGGAAGGATCTT GGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCCTTGCAATGTA CAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATTTATTGCTCAG TGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGGGGCCTTTTTA CATCAAGTTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATGCATATTGTCA AGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCGCAATCAGGAC TATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCAGCCCAGAGCC AGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAGCTCATCTACACTCTGGAGAGCTTGT CGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGACTCTAGATGCACTTTTGTT CCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCGCAAAGATTTACTGGTAGC AGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTATGTTTTAGAGGGAAGGAA TGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGGGAATAGCTCCGGAGATGG GACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACGTAAATCTATATTAACTCT AGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCATTGGCAAAGCCAATCTGAA CAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAGGCAGCTTCTTGAAGAAGG CTTTTTCCATGCAGACCCCCATCCAGGTAATCTGGTTGCAACTGAAGGTGGATCACTCGC GTATTTTGATTTTGGTATGATGGGGGATATTCCAAGGCACTATCGTGTAGGGCTTATACA AATGCTTGTGCACTATGTTAACCGTGACTCCTTGGGCTTGGCAAATGACTTCCATTCACT TGGGTTTGTCCCTGAGGGAACAGACCTACATGGGGTTGCTGATGCATTACGTGTTTCCTT TGGTGATGGAAGGAGGCAATCAAATGATTTTCAGGGGGTGATGAGCCATCTGTATGATGT CATGTATGAGTTTAATTTCTCTCTTCCTCCGGATTACGCACTGGTGATAAGAGCACTGGG TTCTTTAGAAGGGACTGCAAAAGCATTGGATCCTGACTTCAAAGTTATTGAAAGTGCATA CCCATTTGTCATTGGGAGGCTACTTGAAGACCCCAGCCCTGATATGAGGAAAATATTGAG GCAGCTCTTGATATGCGATGATGGATCCATCAGATGGAATCGACTGGAGCGGCTGATTGC AGCTATATCCGAACAGTCAGAATCTTCAAATAAGTCTGAAGATAGATCTGGTGAAAATGC TGCCAACAAACCTGGGTGGAGATCATTCGACATGCATTCTGTGGTTGCAGCTACAGAAGA CCTTTTTCATTTCATTTTATCAAGGAAAGGCTGGAGGGTTCGTGTTTTTCTTGTTCAGGA CATTGTAAAAGCTTCAGATGCATTCCTACAAGAAGCAACATTTCCAGGTATATTCGATGA AGAGGGGACTACAGGGGAGCTACATCCAGAGAGAAGTAAAATGATAAGAAGGGTGGTACA TGGTGTTCAATCATTCCGTCAAGCTATCAGTTTGGCCCCAGATGCCTGGACTGCTATGCT ATTCCGTACCTTGTTGAAACCTGAATCCCAGAAATTTATTCTTGATGTCTTTCTAGCCTT GGCAATGCATTCCTGTTACAAGATTCCAGAAACAAGCTGGATTTGTATGTCGAGATTCCT GAATTACTTGGACAGGCAGGGTAGGTAACACAGATAATGGAAATGCAGTCTAA



consensusID : consensus_2407#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2198
fasta sequence
                              [TCCCTCCCCAAGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCCGGGGCGGCGGAGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCCTCCTCGTCGCCCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCGACGGACTCGTCCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCACCACCGCTTCCCGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATGGGGAGAGACCGTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTGGAAGGATCTTGGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCCTTGCAATGTACAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATTTATTGCTCAGTGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGGGGCCTTTTTACATCAAGCTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATGCATATTGTCAAGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCGCAATCAGGACTATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCAGCCCAGAGCCAGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAGTCATGCAGCTCATCTACACTCTGGAGAGCTTGTCGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGACTCTAGATGCACTTTTGTTCCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCGCAAAGATTTACTGGTAGCAGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTATGTTTTAGAGGGAAGGAATGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGGGAATAGCTCCGGAGATGGGACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACGTAAATCTATATTAACTCTAGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCATTGGCAAAGCCAATCTGAACAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAGGCAGCTTCTTGAAGAAGGCTTTTTCCATGCAGACCCCCATCCAGCTTGTGCACTATGTTAACCGTGACTCCTTGGGCTTGGCAAATGACTTCCATTCACTTGGGTTTGTCCCTGAGGGAACAGACCTACATGGGGTTGCTGATGCATTACGTGTTTCCTTTGGTGATGGAAGGAGGCAATCAAATGATTTTCAGGGGGTGATGAGCCATCTGTATGATGTCATGTATGAGTTTAATTTCTCTCTTCCTCCGGATTACGCACTGGTGATAAGAGCACTGGGTTCTTTAGAAGGGACTGCAAAAGCATTGGATCCTGACTTCAAAGTTATTGAAAGTGCATACCCATTTGTCATTGGGAGGCTACTTGAAGACCCCAGCCCTGATATGAGGAAAATATTGAGGCAGCTCTTGATATGCGATGATGGATCCATCAGATGGAATCGACTGGAGCGGCTGATTGCAGCTATATCCGAACAGTCAGAATCTTCAAATAAGTCTGAAGATAGATCTGGTGAAAATGCTGCCAACAAACCTGGGTGGAGATCATTCGACATGCATTCTGTGGTTGCAGCTACAGAAGACCTTTTTCATTTCATTTTATCAAGGAAAGGCTGGAGGGTTCGTGTTTTTCTTGTTCAGGACATTGTAAAAGCTTCAGATGCATTCCTACAAGAAGCAACATTTCCAGGTATATTCGATGAAGAGGGGACTACAGGGGAGCTACATCCAGAGAGAAGTAAAATGATAAGAAGGGTGGTACATGGTGTTCAATCATTCCGTCAAGCTATCAGTTTGGCCCCAGATGCCTGGACTGCTATGCTATTCCGTACCTTGTTGAAACCTGAATCCCAGAAATTTATTCTTGATGTCTTTCTAGCCTTGGCAATGCATTCCTGTTACAAGATTCCAGAAACAAGCTGGATTTGTATGTCGAGATTCCTGAATTACTTGGACAGGCAGGGTAGGTAACACAGATAATGGAAATGCAGTCTAATTATC]

[+] EMBL AK102099             [TCCCTCCCCAAGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCCGGGGCGGCGGAGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCCTCCTCGTCGCCCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCGACGGACTCGTCCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCACCACCGCTTCCCGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATGGGGAGAGACCGTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTGGAAGGATCTTGGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCCTTGCAATGTACAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATTTATTGCTCAGTGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGGGGCCTTTTTACATCAAGCTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATGCATATTGTCAAGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCGCAATCAGGACTATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCAGCCCAGAGCCAGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAGTCATGCAGCTCATCTACACTCTGGAGAGCTTGTCGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGACTCTAGATGCACTTTTGTTCCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCGCAAAGATTTACTGGTAGCAGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTATGTTTTAGAGGGAAGGAATGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGGGAATAGCTCCGGAGATGGGACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACGTAAATCTATATTAACTCTAGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCATTGGCAAAGCCAATCTGAACAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAGGCAGCTTCTTGAAGAAGGCTTTTTCCATGCAGACCCCCATCCAGCTTGTGCACTATGTTAACCGTGACTCCTTGGGCTTGGCAAATGACTTCCATTCACTTGGGTTTGTCCCTGAGGGAACAGACCTACATGGGGTTGCTGATGCATTACGTGTTTCCTTTGGTGATGGAAGGAGGCAATCAAATGATTTTCAGGGGGTGATGAGCCATCTGTATGATGTCATGTATGAGTTTAATTTCTCTCTTCCTCCGGATTACGCACTGGTGATAAGAGCACTGGGTTCTTTAGAAGGGACTGCAAAAGCATTGGATCCTGACTTCAAAGTTATTGAAAGTGCATACCCATTTGTCATTGGGAGGCTACTTGAAGACCCCAGCCCTGATATGAGGAAAATATTGAGGCAGCTCTTGATATGCGATGATGGATCCATCAGATGGAATCGACTGGAGCGGCTGATTGCAGCTATATCCGAACAGTCAGAATCTTCAAATAAGTCTGAAGATAGATCTGGTGAAAATGCTGCCAACAAACCTGGGTGGAGATCATTCGACATGCATTCTGTGGTTGCAGCTACAGAAGACCTTTTTCATTTCATTTTATCAAGGAAAGGCTGGAGGGTTCGTGTTTTTCTTGTTCAGGACATTGTAAAAGCTTCAGATGCATTCCTACAAGAAGCAACATTTCCAGGTATATTCGATGAAGAGGGGACTACAGGGGAGCTACATCCAGAGAGAAGTAAAATGATAAGAAGGGTGGTACATGGTGTTCAATCATTCCGTCAAGCTATCAGTTTGGCCCCAGATGCCTGGACTGCTATGCTATTCCGTACCTTGTTGAAACCTGAATCCCAGAAATTTATTCTTGATGTCTTTCTAGCCTTGGCAATGCATTCCTGTTACAAGATTCCAGAAACAAGCTGGATTTGTATGTCGAGATTCCTGAATTACTTGGACAGGCAGGGTAGGTAACACAGATAATGGAAATGCAGTCTAATTATC]


>consensus_2407#1 TCCCTCCCCAAGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCC GGGGCGGCGGAGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCC TCCTCGTCGCCCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCG ACGGACTCGTCCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCAC CACCGCTTCCCGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATG GGGAGAGACCGTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTG GAAGGATCTTGGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCC TTGCAATGTACAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATT TATTGCTCAGTGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGG GGCCTTTTTACATCAAGCTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATG CATATTGTCAAGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCG CAATCAGGACTATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCA GCCCAGAGCCAGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAGTCATGCAGCTCATCT ACACTCTGGAGAGCTTGTCGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGAC TCTAGATGCACTTTTGTTCCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCG CAAAGATTTACTGGTAGCAGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTA TGTTTTAGAGGGAAGGAATGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGG GAATAGCTCCGGAGATGGGACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACG TAAATCTATATTAACTCTAGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCAT TGGCAAAGCCAATCTGAACAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAG GCAGCTTCTTGAAGAAGGCTTTTTCCATGCAGACCCCCATCCAGCTTGTGCACTATGTTA ACCGTGACTCCTTGGGCTTGGCAAATGACTTCCATTCACTTGGGTTTGTCCCTGAGGGAA CAGACCTACATGGGGTTGCTGATGCATTACGTGTTTCCTTTGGTGATGGAAGGAGGCAAT CAAATGATTTTCAGGGGGTGATGAGCCATCTGTATGATGTCATGTATGAGTTTAATTTCT CTCTTCCTCCGGATTACGCACTGGTGATAAGAGCACTGGGTTCTTTAGAAGGGACTGCAA AAGCATTGGATCCTGACTTCAAAGTTATTGAAAGTGCATACCCATTTGTCATTGGGAGGC TACTTGAAGACCCCAGCCCTGATATGAGGAAAATATTGAGGCAGCTCTTGATATGCGATG ATGGATCCATCAGATGGAATCGACTGGAGCGGCTGATTGCAGCTATATCCGAACAGTCAG AATCTTCAAATAAGTCTGAAGATAGATCTGGTGAAAATGCTGCCAACAAACCTGGGTGGA GATCATTCGACATGCATTCTGTGGTTGCAGCTACAGAAGACCTTTTTCATTTCATTTTAT CAAGGAAAGGCTGGAGGGTTCGTGTTTTTCTTGTTCAGGACATTGTAAAAGCTTCAGATG CATTCCTACAAGAAGCAACATTTCCAGGTATATTCGATGAAGAGGGGACTACAGGGGAGC TACATCCAGAGAGAAGTAAAATGATAAGAAGGGTGGTACATGGTGTTCAATCATTCCGTC AAGCTATCAGTTTGGCCCCAGATGCCTGGACTGCTATGCTATTCCGTACCTTGTTGAAAC CTGAATCCCAGAAATTTATTCTTGATGTCTTTCTAGCCTTGGCAATGCATTCCTGTTACA AGATTCCAGAAACAAGCTGGATTTGTATGTCGAGATTCCTGAATTACTTGGACAGGCAGG GTAGGTAACACAGATAATGGAAATGCAGTCTAATTATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2407#0      ----------AGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCC 50
consensus_2407#1      TCCCTCCCCAAGCAAAGCATCGGCATCTCTCCTCCCTAAAACCCCACCTCCCGTCTCCCC 60
                                **************************************************

consensus_2407#0      GGGGCGGCGGAGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCC 110
consensus_2407#1      GGGGCGGCGGAGCCGATGAGATCCCGGCCATGGCGGGCCCCACCTCGCGCCGCCTCCTCC 120
                      ************************************************************

consensus_2407#0      TCCTCGTCGCCCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCG 170
consensus_2407#1      TCCTCGTCGCCCGCCGCGCTGGTCACCTCTGCCGCCACCACCACCACCACCACCACCGCG 180
                      ************************************************************

consensus_2407#0      ACGGACTCGTCCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCAC 230
consensus_2407#1      ACGGACTCGTCCTGGCCCGCTCGCTCCAGGCCGCTGCCGCTGCCGCCGCCTCGTCGCCAC 240
                      ************************************************************

consensus_2407#0      CACCGCTTCCCGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATG 290
consensus_2407#1      CACCGCTTCCCGCCTCGCCCCCGGCCAGGAGCTTTTCTAGTGCATTCTCAAGTGTTCATG 300
                      ************************************************************

consensus_2407#0      GGGAGAGACCGTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTG 350
consensus_2407#1      GGGAGAGACCGTCCTCAGAATATGCAAAGATCAGAAAGGAGTCGTTAGAAAGCCAGTTTG 360
                      ************************************************************

consensus_2407#0      GAAGGATCTTGGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCC 410
consensus_2407#1      GAAGGATCTTGGGTTCAAGCTCACGTACACTATTTGCAGATCGTGGCTTTGGTCCATTCC 420
                      ************************************************************

consensus_2407#0      TTGCAATGTACAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATT 470
consensus_2407#1      TTGCAATGTACAGGGCAGCAATTATCTCTTTTCATGTTATGAAGCTCACTATTTGGCATT 480
                      ************************************************************

consensus_2407#0      TATTGCTCAGTGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGG 530
consensus_2407#1      TATTGCTCAGTGATGTGCACAAACGGGCTGAGAAGTTCCAGGAGACCTTGATCCGGTTGG 540
                      ************************************************************

consensus_2407#0      GGCCTTTTTACATCAAGTTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATG 590
consensus_2407#1      GGCCTTTTTACATCAAGCTTGGACAAGCATTGAGCACACGCCCTGATATATTGCCGAATG 600
                      ***************** ******************************************

consensus_2407#0      CATATTGTCAAGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCG 650
consensus_2407#1      CATATTGTCAAGAGCTCTCTAAGCTACAGGACCAGATACCACCATTTCCTACTCGTATCG 660
                      ************************************************************

consensus_2407#0      CAATCAGGACTATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCA 710
consensus_2407#1      CAATCAGGACTATTGAGTCTCAACTGGGTTCTCGAATTTCTGATCTATTTGCTGATATCA 720
                      ************************************************************

consensus_2407#0      GCCCAGAGCCAGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAG--------CTCATCT 762
consensus_2407#1      GCCCAGAGCCAGTTGCTGCAGCATCGCTGGGGCAAGTATATAAAGTCATGCAGCTCATCT 780
                      *********************************************        *******

consensus_2407#0      ACACTCTGGAGAGCTTGTCGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGAC 822
consensus_2407#1      ACACTCTGGAGAGCTTGTCGCAGTCAAAGTTCAGAGGCCTGGAATGACTCCCTTGCTGAC 840
                      ************************************************************

consensus_2407#0      TCTAGATGCACTTTTGTTCCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCG 882
consensus_2407#1      TCTAGATGCACTTTTGTTCCATATGATCGGAGGACAGTTGAAACGGTTTGCAAAGGCTCG 900
                      ************************************************************

consensus_2407#0      CAAAGATTTACTGGTAGCAGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTA 942
consensus_2407#1      CAAAGATTTACTGGTAGCAGTCAATGAGATTGTCAGGCACATGTTTGATGAGATTGATTA 960
                      ************************************************************

consensus_2407#0      TGTTTTAGAGGGAAGGAATGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGG 1002
consensus_2407#1      TGTTTTAGAGGGAAGGAATGCTGAAAGATTTGCGAGACTTTATTCTCATGATTTAGGTGG 1020
                      ************************************************************

consensus_2407#0      GAATAGCTCCGGAGATGGGACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACG 1062
consensus_2407#1      GAATAGCTCCGGAGATGGGACAAGTATCAAAGTCCCAAAGGTCTACTGGAATTTTACACG 1080
                      ************************************************************

consensus_2407#0      TAAATCTATATTAACTCTAGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCAT 1122
consensus_2407#1      TAAATCTATATTAACTCTAGAATGGATTGATGGGATCAAGCTCACTGATGCTGAGCGCAT 1140
                      ************************************************************

consensus_2407#0      TGGCAAAGCCAATCTGAACAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAG 1182
consensus_2407#1      TGGCAAAGCCAATCTGAACAGGAAAAGGATGATCGATGAGGGTCTCTATTGTTCATTGAG 1200
                      ************************************************************

consensus_2407#0      GCAGCTTCTTGAAGAAGGCTTTTTCCATGCAGACCCCCATCCAGGTAATCTGGTTGCAAC 1242
consensus_2407#1      GCAGCTTCTTGAAGAAGGCTTTTTCCATGCAGACCCCCATCCAG---------------- 1244
                      ********************************************                

consensus_2407#0      TGAAGGTGGATCACTCGCGTATTTTGATTTTGGTATGATGGGGGATATTCCAAGGCACTA 1302
consensus_2407#1      ------------------------------------------------------------
                                                                                  

consensus_2407#0      TCGTGTAGGGCTTATACAAATGCTTGTGCACTATGTTAACCGTGACTCCTTGGGCTTGGC 1362
consensus_2407#1      ----------------------CTTGTGCACTATGTTAACCGTGACTCCTTGGGCTTGGC 1282
                                            **************************************

consensus_2407#0      AAATGACTTCCATTCACTTGGGTTTGTCCCTGAGGGAACAGACCTACATGGGGTTGCTGA 1422
consensus_2407#1      AAATGACTTCCATTCACTTGGGTTTGTCCCTGAGGGAACAGACCTACATGGGGTTGCTGA 1342
                      ************************************************************

consensus_2407#0      TGCATTACGTGTTTCCTTTGGTGATGGAAGGAGGCAATCAAATGATTTTCAGGGGGTGAT 1482
consensus_2407#1      TGCATTACGTGTTTCCTTTGGTGATGGAAGGAGGCAATCAAATGATTTTCAGGGGGTGAT 1402
                      ************************************************************

consensus_2407#0      GAGCCATCTGTATGATGTCATGTATGAGTTTAATTTCTCTCTTCCTCCGGATTACGCACT 1542
consensus_2407#1      GAGCCATCTGTATGATGTCATGTATGAGTTTAATTTCTCTCTTCCTCCGGATTACGCACT 1462
                      ************************************************************

consensus_2407#0      GGTGATAAGAGCACTGGGTTCTTTAGAAGGGACTGCAAAAGCATTGGATCCTGACTTCAA 1602
consensus_2407#1      GGTGATAAGAGCACTGGGTTCTTTAGAAGGGACTGCAAAAGCATTGGATCCTGACTTCAA 1522
                      ************************************************************

consensus_2407#0      AGTTATTGAAAGTGCATACCCATTTGTCATTGGGAGGCTACTTGAAGACCCCAGCCCTGA 1662
consensus_2407#1      AGTTATTGAAAGTGCATACCCATTTGTCATTGGGAGGCTACTTGAAGACCCCAGCCCTGA 1582
                      ************************************************************

consensus_2407#0      TATGAGGAAAATATTGAGGCAGCTCTTGATATGCGATGATGGATCCATCAGATGGAATCG 1722
consensus_2407#1      TATGAGGAAAATATTGAGGCAGCTCTTGATATGCGATGATGGATCCATCAGATGGAATCG 1642
                      ************************************************************

consensus_2407#0      ACTGGAGCGGCTGATTGCAGCTATATCCGAACAGTCAGAATCTTCAAATAAGTCTGAAGA 1782
consensus_2407#1      ACTGGAGCGGCTGATTGCAGCTATATCCGAACAGTCAGAATCTTCAAATAAGTCTGAAGA 1702
                      ************************************************************

consensus_2407#0      TAGATCTGGTGAAAATGCTGCCAACAAACCTGGGTGGAGATCATTCGACATGCATTCTGT 1842
consensus_2407#1      TAGATCTGGTGAAAATGCTGCCAACAAACCTGGGTGGAGATCATTCGACATGCATTCTGT 1762
                      ************************************************************

consensus_2407#0      GGTTGCAGCTACAGAAGACCTTTTTCATTTCATTTTATCAAGGAAAGGCTGGAGGGTTCG 1902
consensus_2407#1      GGTTGCAGCTACAGAAGACCTTTTTCATTTCATTTTATCAAGGAAAGGCTGGAGGGTTCG 1822
                      ************************************************************

consensus_2407#0      TGTTTTTCTTGTTCAGGACATTGTAAAAGCTTCAGATGCATTCCTACAAGAAGCAACATT 1962
consensus_2407#1      TGTTTTTCTTGTTCAGGACATTGTAAAAGCTTCAGATGCATTCCTACAAGAAGCAACATT 1882
                      ************************************************************

consensus_2407#0      TCCAGGTATATTCGATGAAGAGGGGACTACAGGGGAGCTACATCCAGAGAGAAGTAAAAT 2022
consensus_2407#1      TCCAGGTATATTCGATGAAGAGGGGACTACAGGGGAGCTACATCCAGAGAGAAGTAAAAT 1942
                      ************************************************************

consensus_2407#0      GATAAGAAGGGTGGTACATGGTGTTCAATCATTCCGTCAAGCTATCAGTTTGGCCCCAGA 2082
consensus_2407#1      GATAAGAAGGGTGGTACATGGTGTTCAATCATTCCGTCAAGCTATCAGTTTGGCCCCAGA 2002
                      ************************************************************

consensus_2407#0      TGCCTGGACTGCTATGCTATTCCGTACCTTGTTGAAACCTGAATCCCAGAAATTTATTCT 2142
consensus_2407#1      TGCCTGGACTGCTATGCTATTCCGTACCTTGTTGAAACCTGAATCCCAGAAATTTATTCT 2062
                      ************************************************************

consensus_2407#0      TGATGTCTTTCTAGCCTTGGCAATGCATTCCTGTTACAAGATTCCAGAAACAAGCTGGAT 2202
consensus_2407#1      TGATGTCTTTCTAGCCTTGGCAATGCATTCCTGTTACAAGATTCCAGAAACAAGCTGGAT 2122
                      ************************************************************

consensus_2407#0      TTGTATGTCGAGATTCCTGAATTACTTGGACAGGCAGGGTAGGTAACACAGATAATGGAA 2262
consensus_2407#1      TTGTATGTCGAGATTCCTGAATTACTTGGACAGGCAGGGTAGGTAACACAGATAATGGAA 2182
                      ************************************************************

consensus_2407#0      ATGCAGTCTAA----- 2273
consensus_2407#1      ATGCAGTCTAATTATC 2198
                      ***********     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)