cluster # 2409

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Oryza sativa
cluster # 2409 cluster # 2409 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2409#0 length = 1266 sequences # 2
consensusID : consensus_2409#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1266
fasta sequence
                              [TTAGTCCCTCGAAGTAGTCGCTTCTTCTTCTCGTAGCCTCTTCAGATCGATCGCTTCGTCGTCATGGCTAGTTTCTCGACGGTTTTCCTGCTCCTCAGCCTTGTCTGCCTAGCTTCGCCGTGCGCCGCGCAGCGCGTGATCTGCGAAGCCCCACCGTGCACCACCGCGTCGCAGGTGAAGACAACCCCGACAAATCGCGCCTCCCACGTCCGCCTCCCCGAAGGCGTCACCGGCGCCGAGAGCCTCGCCTTCGACTCCAGCAACCGTGGCCCCTTCACCGGCGTCTCCGATGGCCGCGTCCTCAAGTGGGGCGGCGACTCCGCCGGCTGGACTACCTTCGCGTACAACCGGAATTACCGGAGCAACCCTACGTGCGCGTCGTCATCTGAGGAGACGGAGAGCACATGCGGGCGTCCGCTGGGTCTTGCGTTCCACCTCAAGACGGGGATCCTCTACTTCGCCGACGCCTACAAGGGCCTGATGCGGGTTGGGCCGCGGGGTGGCCAGGCCGACGTGCTCGCCACGGAGGCCGACGGCGTGCCGTTCAATTACCTCAACGGCGTCGACGTCGACCAGGACACCGGTGACGTCTACTTCACCGACAGCAGCACCACCATCACACGCCGATACCAAGAGAACATCATGAGGAACCGCGACGCGACGGCTCGGCTGATGAAGTACGACGCGAAGACGAAGCAGGTGACGGTGCTGAAGGACCGGTTGCCGTACGCCAACGGCGTGGCCGTCAGCCACGACGGGAGGTACCTCGTGGTGGCGCACACGGGGCCGGCACAGGTGTTCAGGTATTGGCTCAAGGGGGCCAAGGCCGGCCAGTACGAGCTCTTCGCCGACCTGCCCGGGTACCCCGACAACGTCCGGCGAGACGCCAAGGGGGGCTACTGGGTGGGGCTCAACCGGGAGAAGATTACGTTCAACGTGCCGGCGGCGGCTTCTCCGGCCAAGCACCTGGTCGGCGTCCGGCTCAACGGCGACGGCGTCGAGGTGGAGGAGCTGACGGCTGCTAGTAGGGCTGTGACGCTGAGCGAGGTTGTGGAGAGGGACCGCAAGTTGTGGCTCGGCTCCGTCGATCTCGACTACGTCGGCCTACTGCAGTAGAAAGAAGTTATCTGTTTAGTGGTGTTAGGAATAATAAAGGCAGGCTAATTAGGTATTTAGCAGTAGAATCAGGATTGGTACAACTCTTTTTTGCTGGCAGCTATATTAATTAGACGTTTTAGTAGTCTTTTTTCAGTGTGTGCTTGATAT]

[+] EMBL AK073494             [TTAGTCCCTCGAAGTAGTCGCTTCTTCTTCTCGTAGCCTCTTCAGATCGATCGCTTCGTCGTCATGGCTAGTTTCTCGACGGTTTTCCTGCTCCTCAGCCTTGTCTGCCTAGCTTCGCCGTGCGCCGCGCAGCGCGTGATCTGCGAAGCCCCACCGTGCACCACCGCGTCGCAGGTGAAGACAACCCCGACAAATCGCGCCTCCCACGTCCGCCTCCCCGAAGGCGTCACCGGCGCCGAGAGCCTCGCCTTCGACTCCAGCAACCGTGGCCCCTTCACCGGCGTCTCCGATGGCCGCGTCCTCAAGTGGGGCGGCGACTCCGCCGGCTGGACTACCTTCGCGTACAACCGGAATTACCGGAGCAACCCTACGTGCGCGTCGTCATCTGAGGAGACGGAGAGCACATGCGGGCGTCCGCTGGGTCTTGCGTTCCACCTCAAGACGGGGATCCTCTACTTCGCCGACGCCTACAAGGGCCTGATGCGGGTTGGGCCGCGGGGTGGCCAGGCCGACGTGCTCGCCACGGAGGCCGACGGCGTGCCGTTCAATTACCTCAACGGCGTCGACGTCGACCAGGACACCGGTGACGTCTACTTCACCGACAGCAGCACCACCATCACACGCCGATACCAAGAGAACATCATGAGGAACCGCGACGCGACGGCTCGGCTGATGAAGTACGACGCGAAGACGAAGCAGGTGACGGTGCTGAAGGACCGGTTGCCGTACGCCAACGGCGTGGCCGTCAGCCACGACGGGAGGTACCTCGTGGTGGCGCACACGGGGCCGGCACAGGTGTTCAGGTATTGGCTCAAGGGGGCCAAGGCCGGCCAGTACGAGCTCTTCGCCGACCTGCCCGGGTACCCCGACAACGTCCGGCGAGACGCCAAGGGGGGCTACTGGGTGGGGCTCAACCGGGAGAAGATTACGTTCAACGTGCCGGCGGCGGCTTCTCCGGCCAAGCACCTGGTCGGCGTCCGGCTCAACGGCGACGGCGTCGAGGTGGAGGAGCTGACGGCTGCTAGTAGGGCTGTGACGCTGAGCGAGGTTGTGGAGAGGGACCGCAAGTTGTGGCTCGGCTCCGTCGATCTCGACTACGTCGGCCTACTGCAGTAGAAAGAAGTTATCTGTTTAGTGGTGTTAGGAATAATAAAGGCAGGCTAATTAGGTATTTAGCAGTAGAATCAGGATTGGTACAACTCTTTTTTGCTGGCAGCTATATTAATTAGACGTTTTAGTAGTCTTTTTTCAGTGTGTGCTTGATAT]
[+] EMBL AK066840             [                                                                                                                                                                                                                                                                                                                                                                                                 CTGAGGAGACGGAGAGCACATGCGGGCGTCCGCTGGGTCTTGCGTTCCACCTCAAGACGGGGATCCTCTACTTCGCCGACGCCTACAAGGGCCTGATGCGGGTTGGGCCGCGGGGTGGCCAGGCCGACGTGCTCGCCACGGAGGCCGACGGCGTGCCGTTCAATTACCTCAACGGCGTCGACGTCGACCAGGACACCGGTGACGTCTACTTCACCGACAGCAGCACCACCATCACACGCCGATACCAAGAGAACATCATGAGGAACCGCGACGCGACGGCTCGGCTGATGAAGTACGACGCGAAGACGAAGCAGGTGACGGTGCTGAAGGACCGGTTGCCGTACGCCAACGGCGTGGCCGTCAGCCACGACGGGAGGTACCTCGTGGTGGCGCACACGGGGCCGGCACAGGTGTTCAGGTATTGGCTCAAGGGGGCCAAGGCCGGCCAGTACGAGCTCTTCGCCGACCTGCCCGGGTACCCCGACAACGTCCGGCGAGACGCCAAGGGGGGCTACTGGGTGGGGCTCAACCGGGAGAAGATTACGTTCAACGTGCCGGCGGCGGCTTCTCCGGCCAAGCACCTGGTCGGCGTCCGGCTCAACGGCGACGGCGTCGAGGTGGAGGAGCTGACGGCTGCTAGTAGGGCTGTGACGCTGAGCGAGGTTGTGGAGAGGGACCGCAAGTTGTGGCTCGGCTCCGTCGATCTCGACTACGTCGGCCTACTGCAGTAGAAGGAAGTTATCTGTTTAGTGGTGTTAGGAATAATAAAGGCAGGCTAATTAGGTATTTAGCAGTAGAATCAGGATTGGTACAACTCTTTTTTGCTGGCAGCTATATTAATTAGAC                                   ]




>consensus_2409#0
TTAGTCCCTCGAAGTAGTCGCTTCTTCTTCTCGTAGCCTCTTCAGATCGATCGCTTCGTC
GTCATGGCTAGTTTCTCGACGGTTTTCCTGCTCCTCAGCCTTGTCTGCCTAGCTTCGCCG
TGCGCCGCGCAGCGCGTGATCTGCGAAGCCCCACCGTGCACCACCGCGTCGCAGGTGAAG
ACAACCCCGACAAATCGCGCCTCCCACGTCCGCCTCCCCGAAGGCGTCACCGGCGCCGAG
AGCCTCGCCTTCGACTCCAGCAACCGTGGCCCCTTCACCGGCGTCTCCGATGGCCGCGTC
CTCAAGTGGGGCGGCGACTCCGCCGGCTGGACTACCTTCGCGTACAACCGGAATTACCGG
AGCAACCCTACGTGCGCGTCGTCATCTGAGGAGACGGAGAGCACATGCGGGCGTCCGCTG
GGTCTTGCGTTCCACCTCAAGACGGGGATCCTCTACTTCGCCGACGCCTACAAGGGCCTG
ATGCGGGTTGGGCCGCGGGGTGGCCAGGCCGACGTGCTCGCCACGGAGGCCGACGGCGTG
CCGTTCAATTACCTCAACGGCGTCGACGTCGACCAGGACACCGGTGACGTCTACTTCACC
GACAGCAGCACCACCATCACACGCCGATACCAAGAGAACATCATGAGGAACCGCGACGCG
ACGGCTCGGCTGATGAAGTACGACGCGAAGACGAAGCAGGTGACGGTGCTGAAGGACCGG
TTGCCGTACGCCAACGGCGTGGCCGTCAGCCACGACGGGAGGTACCTCGTGGTGGCGCAC
ACGGGGCCGGCACAGGTGTTCAGGTATTGGCTCAAGGGGGCCAAGGCCGGCCAGTACGAG
CTCTTCGCCGACCTGCCCGGGTACCCCGACAACGTCCGGCGAGACGCCAAGGGGGGCTAC
TGGGTGGGGCTCAACCGGGAGAAGATTACGTTCAACGTGCCGGCGGCGGCTTCTCCGGCC
AAGCACCTGGTCGGCGTCCGGCTCAACGGCGACGGCGTCGAGGTGGAGGAGCTGACGGCT
GCTAGTAGGGCTGTGACGCTGAGCGAGGTTGTGGAGAGGGACCGCAAGTTGTGGCTCGGC
TCCGTCGATCTCGACTACGTCGGCCTACTGCAGTAGAAAGAAGTTATCTGTTTAGTGGTG
TTAGGAATAATAAAGGCAGGCTAATTAGGTATTTAGCAGTAGAATCAGGATTGGTACAAC
TCTTTTTTGCTGGCAGCTATATTAATTAGACGTTTTAGTAGTCTTTTTTCAGTGTGTGCT
TGATAT
clustalw multiple alignements is not computed in this case