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Oryza sativa
cluster # 2417 cluster # 2417       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2417#0 length = 2863 sequences # 1  
consensus_2417#1 length = 832 sequences # 1  

consensusID : consensus_2417#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2863
fasta sequence
                              [ACTGCTACTCTCTCCATCAGTCCACAAAGAGGAAGGTGGAGGAAGAAGACCTGCAAGGTGAGAGGAGGCCAATGGTGAAGTTCTCCAAGCAGTTCGAGGGCCAGCTTGTGCCCGAATGGAAGGACGCCTTCGTGGACTACTGGCAGCTCAAGAAGGACATCAAGAGGCTGCAGGCTGCGGAGGCGGAGGCGGCCGGGGTGGCGGCGACGACGCCGCTGTCGCAGTGCCAGGCGCCGGTGGCGGCGGCTCACTGGGTCATGAGGCTGCCGTTCTTGCACCCCCATGGACACCACCACAAGGAGCATGGTGCCATCCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGGCGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGCGCCGGGTTCGCGGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAACCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCAGCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCGCCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGTCTCCTGCTCCATCCTCCACGGAGATCAGTCCCTCAGAGGCACTTCTGAGCAAGAACAGGAAGGCCAGGAAAAGCTCACCAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGATGATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAAGAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAAGGCAGAAGCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGTCACCGCCATCCGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGTACAAAATGCGGCGACAAGCTGAGCATCAACAAGAGGAAGGTGCATCAGGCAGAGAAGATGATAAGGGGTGCCCTGATTGAGCTGTACAAGGGATTGGGGTATCTCAAGACATACCGGAGCTTAAACATGATGGCGTTTGTGAAGATTTTGAAGAAATTTGACAAGGTTACAGCAAAGGAAGCTCAGTCAATATACCTTAAAGTAGTGGAGAGCTCCTACTTCAATGTCTCTGACAAGGTAATTAGGCTAATGGACGATGTGGATGAGCTGTTTGTGAGGCATTTTGCAGAAGGTGACAAACGGAAAGCAATGAAGTATCTTAAGCCAAATCAGAGGGAAGAATCACACACCACAACATTTTTCATAGGGCTATTCACTGGTGGCTTTGCAGCATTATTCATTGGTTATTGTATCATGGCACACATTGCTGGGATGTACACCCAGCAGTCAAACAAGGTCTACATGGCAACATCATATCCTGTCCTGAGCATGTTCAGCCTCTTCTTTCTGCATCTCTTCCTCTACGGATGCAACATCTTCATGTGGAGAAAGACACGCATAAACTACACATTCATATTTGAATTCACGCCTACCAAAGAGCTGAAGTATCGTGATGTGTTCCTGATTTGCACTACTTCCATGACAATTGTCATTGGTGTTATGTTTGCACACCTGACACTCATTGTCAAAGGGTATTCGTCATGTGCAGTCCAAGCAATACCAGGAGCTCTACTTCTGGTTTTCTTGCTAATATTGGTCTGCCCTTTCAACATACTCTACCGATCATGTCGTTACCACTTCCTAACAGTGATCAGAAACATCATTCTAACCCCTTTCTACAAGGTTGTCATGGTTGATTTCTTCATGGCTGATCAGCTTTGCAGCCAGGTACCACTGCTTAGGAGCCTAGAGTATCTGGCGTGCTATTACATAACCAGCAGGCTACAAGACACAAGACTATGGCTACTGCACCAGAGTGAAGCACTTTAGAGATTTGGCTTATGCAGTATCCTTCCTACCTTACTACTGGAGGGCCATGCAGTGCGCAAGGAGATGGTTTGACGAGGGGGACATAAATCACATTGTCAACCTTGGGAAGTATGTGTCAGCAATGCTTGCTGCTGGAACAAAAGTGGCATACGAGAATGATAACAGTGCTGGATGGCTGTCACTTGTTGTCATTGTGTCGAGTCTCGCCACTATCTACCAACTATACTGGGACTTTGTCAAGGATTGGGGTCTTCTGCAGTTTAACTCCAAGAACCCTTGGCTCCGTAATGATCTGATACTCAAACAAAAGTACATCTATTTCCTTTCCATGGGTCTGAACATTATCTTGAGGCTGGCATGGCTTCAGACCGTCATCCACCCTAACATCGGAAGCCTGGATTCCAGAGTAACTTTGTTCATCTTGGCAGCTCTTGAGGTGATTCGACGAGGCCACTGGAACTTCTACAGGTTGGAAAACGAGCACCTAAACAATGCAGGGAAATTCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTGGAAGAGGACTAACAAAATAGGGCATCATCATCATCATTGCAGCAGATTCTAGGGATTCAGAACTCTAAGCAGTTCAGATGTAACACCAACTAATGTTAGAAAGCCTGCACTACCCTATTATGATTCAATTAAATTTTTTGGTGTGAGGAATAATGGGCATTTAACATGTTCAGTTTGGAGAAGATACAAGCAAAAGGCAAACACTATATAGATGTAGAATACAGGGGTTCCAATTAGTTTACCAAGATCGAATACTAATCTCGTGGAGTTGAAGCGAATTCACTTGTGGAAAAATCCAATCAATCACAATTGTTCT]

[+] EMBL AK067110             [ACTGCTACTCTCTCCATCAGTCCACAAAGAGGAAGGTGGAGGAAGAAGACCTGCAAGGTGAGAGGAGGCCAATGGTGAAGTTCTCCAAGCAGTTCGAGGGCCAGCTTGTGCCCGAATGGAAGGACGCCTTCGTGGACTACTGGCAGCTCAAGAAGGACATCAAGAGGCTGCAGGCTGCGGAGGCGGAGGCGGCCGGGGTGGCGGCGACGACGCCGCTGTCGCAGTGCCAGGCGCCGGTGGCGGCGGCTCACTGGGTCATGAGGCTGCCGTTCTTGCACCCCCATGGACACCACCACAAGGAGCATGGTGCCATCCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGGCGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGCGCCGGGTTCGCGGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAACCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCAGCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCGCCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGTCTCCTGCTCCATCCTCCACGGAGATCAGTCCCTCAGAGGCACTTCTGAGCAAGAACAGGAAGGCCAGGAAAAGCTCACCAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGATGATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAAGAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAAGGCAGAAGCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGTCACCGCCATCCGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGTACAAAATGCGGCGACAAGCTGAGCATCAACAAGAGGAAGGTGCATCAGGCAGAGAAGATGATAAGGGGTGCCCTGATTGAGCTGTACAAGGGATTGGGGTATCTCAAGACATACCGGAGCTTAAACATGATGGCGTTTGTGAAGATTTTGAAGAAATTTGACAAGGTTACAGCAAAGGAAGCTCAGTCAATATACCTTAAAGTAGTGGAGAGCTCCTACTTCAATGTCTCTGACAAGGTAATTAGGCTAATGGACGATGTGGATGAGCTGTTTGTGAGGCATTTTGCAGAAGGTGACAAACGGAAAGCAATGAAGTATCTTAAGCCAAATCAGAGGGAAGAATCACACACCACAACATTTTTCATAGGGCTATTCACTGGTGGCTTTGCAGCATTATTCATTGGTTATTGTATCATGGCACACATTGCTGGGATGTACACCCAGCAGTCAAACAAGGTCTACATGGCAACATCATATCCTGTCCTGAGCATGTTCAGCCTCTTCTTTCTGCATCTCTTCCTCTACGGATGCAACATCTTCATGTGGAGAAAGACACGCATAAACTACACATTCATATTTGAATTCACGCCTACCAAAGAGCTGAAGTATCGTGATGTGTTCCTGATTTGCACTACTTCCATGACAATTGTCATTGGTGTTATGTTTGCACACCTGACACTCATTGTCAAAGGGTATTCGTCATGTGCAGTCCAAGCAATACCAGGAGCTCTACTTCTGGTTTTCTTGCTAATATTGGTCTGCCCTTTCAACATACTCTACCGATCATGTCGTTACCACTTCCTAACAGTGATCAGAAACATCATTCTAACCCCTTTCTACAAGGTTGTCATGGTTGATTTCTTCATGGCTGATCAGCTTTGCAGCCAGGTACCACTGCTTAGGAGCCTAGAGTATCTGGCGTGCTATTACATAACCAGCAGGCTACAAGACACAAGACTATGGCTACTGCACCAGAGTGAAGCACTTTAGAGATTTGGCTTATGCAGTATCCTTCCTACCTTACTACTGGAGGGCCATGCAGTGCGCAAGGAGATGGTTTGACGAGGGGGACATAAATCACATTGTCAACCTTGGGAAGTATGTGTCAGCAATGCTTGCTGCTGGAACAAAAGTGGCATACGAGAATGATAACAGTGCTGGATGGCTGTCACTTGTTGTCATTGTGTCGAGTCTCGCCACTATCTACCAACTATACTGGGACTTTGTCAAGGATTGGGGTCTTCTGCAGTTTAACTCCAAGAACCCTTGGCTCCGTAATGATCTGATACTCAAACAAAAGTACATCTATTTCCTTTCCATGGGTCTGAACATTATCTTGAGGCTGGCATGGCTTCAGACCGTCATCCACCCTAACATCGGAAGCCTGGATTCCAGAGTAACTTTGTTCATCTTGGCAGCTCTTGAGGTGATTCGACGAGGCCACTGGAACTTCTACAGGTTGGAAAACGAGCACCTAAACAATGCAGGGAAATTCAGAGCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTGGAAGAGGACTAACAAAATAGGGCATCATCATCATCATTGCAGCAGATTCTAGGGATTCAGAACTCTAAGCAGTTCAGATGTAACACCAACTAATGTTAGAAAGCCTGCACTACCCTATTATGATTCAATTAAATTTTTTGGTGTGAGGAATAATGGGCATTTAACATGTTCAGTTTGGAGAAGATACAAGCAAAAGGCAAACACTATATAGATGTAGAATACAGGGGTTCCAATTAGTTTACCAAGATCGAATACTAATCTCGTGGAGTTGAAGCGAATTCACTTGTGGAAAAATCCAATCAATCACAATTGTTCT]


>consensus_2417#0 ACTGCTACTCTCTCCATCAGTCCACAAAGAGGAAGGTGGAGGAAGAAGACCTGCAAGGTG AGAGGAGGCCAATGGTGAAGTTCTCCAAGCAGTTCGAGGGCCAGCTTGTGCCCGAATGGA AGGACGCCTTCGTGGACTACTGGCAGCTCAAGAAGGACATCAAGAGGCTGCAGGCTGCGG AGGCGGAGGCGGCCGGGGTGGCGGCGACGACGCCGCTGTCGCAGTGCCAGGCGCCGGTGG CGGCGGCTCACTGGGTCATGAGGCTGCCGTTCTTGCACCCCCATGGACACCACCACAAGG AGCATGGTGCCATCCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGGCGGCG CGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGCGCCGGGTTCGCGGACG GCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAACCGCT TCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCAGCTGC AGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCGCCGCC GCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGTCTCCT GCTCCATCCTCCACGGAGATCAGTCCCTCAGAGGCACTTCTGAGCAAGAACAGGAAGGCC AGGAAAAGCTCACCAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGATGATCAGC TCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAAGAAGCCG CCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAAGGCAGAA GCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGTCACCGCCATCCGTGAGC TTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGTACAAAAT GCGGCGACAAGCTGAGCATCAACAAGAGGAAGGTGCATCAGGCAGAGAAGATGATAAGGG GTGCCCTGATTGAGCTGTACAAGGGATTGGGGTATCTCAAGACATACCGGAGCTTAAACA TGATGGCGTTTGTGAAGATTTTGAAGAAATTTGACAAGGTTACAGCAAAGGAAGCTCAGT CAATATACCTTAAAGTAGTGGAGAGCTCCTACTTCAATGTCTCTGACAAGGTAATTAGGC TAATGGACGATGTGGATGAGCTGTTTGTGAGGCATTTTGCAGAAGGTGACAAACGGAAAG CAATGAAGTATCTTAAGCCAAATCAGAGGGAAGAATCACACACCACAACATTTTTCATAG GGCTATTCACTGGTGGCTTTGCAGCATTATTCATTGGTTATTGTATCATGGCACACATTG CTGGGATGTACACCCAGCAGTCAAACAAGGTCTACATGGCAACATCATATCCTGTCCTGA GCATGTTCAGCCTCTTCTTTCTGCATCTCTTCCTCTACGGATGCAACATCTTCATGTGGA GAAAGACACGCATAAACTACACATTCATATTTGAATTCACGCCTACCAAAGAGCTGAAGT ATCGTGATGTGTTCCTGATTTGCACTACTTCCATGACAATTGTCATTGGTGTTATGTTTG CACACCTGACACTCATTGTCAAAGGGTATTCGTCATGTGCAGTCCAAGCAATACCAGGAG CTCTACTTCTGGTTTTCTTGCTAATATTGGTCTGCCCTTTCAACATACTCTACCGATCAT GTCGTTACCACTTCCTAACAGTGATCAGAAACATCATTCTAACCCCTTTCTACAAGGTTG TCATGGTTGATTTCTTCATGGCTGATCAGCTTTGCAGCCAGGTACCACTGCTTAGGAGCC TAGAGTATCTGGCGTGCTATTACATAACCAGCAGGCTACAAGACACAAGACTATGGCTAC TGCACCAGAGTGAAGCACTTTAGAGATTTGGCTTATGCAGTATCCTTCCTACCTTACTAC TGGAGGGCCATGCAGTGCGCAAGGAGATGGTTTGACGAGGGGGACATAAATCACATTGTC AACCTTGGGAAGTATGTGTCAGCAATGCTTGCTGCTGGAACAAAAGTGGCATACGAGAAT GATAACAGTGCTGGATGGCTGTCACTTGTTGTCATTGTGTCGAGTCTCGCCACTATCTAC CAACTATACTGGGACTTTGTCAAGGATTGGGGTCTTCTGCAGTTTAACTCCAAGAACCCT TGGCTCCGTAATGATCTGATACTCAAACAAAAGTACATCTATTTCCTTTCCATGGGTCTG AACATTATCTTGAGGCTGGCATGGCTTCAGACCGTCATCCACCCTAACATCGGAAGCCTG GATTCCAGAGTAACTTTGTTCATCTTGGCAGCTCTTGAGGTGATTCGACGAGGCCACTGG AACTTCTACAGGTTGGAAAACGAGCACCTAAACAATGCAGGGAAATTCAGAGCTGTGAAG GTTGTTCCACTTCCTTTTCATGAAGTGGAAGAGGACTAACAAAATAGGGCATCATCATCA TCATTGCAGCAGATTCTAGGGATTCAGAACTCTAAGCAGTTCAGATGTAACACCAACTAA TGTTAGAAAGCCTGCACTACCCTATTATGATTCAATTAAATTTTTTGGTGTGAGGAATAA TGGGCATTTAACATGTTCAGTTTGGAGAAGATACAAGCAAAAGGCAAACACTATATAGAT GTAGAATACAGGGGTTCCAATTAGTTTACCAAGATCGAATACTAATCTCGTGGAGTTGAA GCGAATTCACTTGTGGAAAAATCCAATCAATCACAATTGTTCT



consensusID : consensus_2417#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 832
fasta sequence
                              [TCAAGGGAAATTTTCAGCAATTTTCATGGTTACGGGTGTTCGTAAAAGTAATAACTGTATCTGTTCTGCTGTTGGCACGTGTGCAATGCAATGCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGGCGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGCGCCGGGTTCGCGGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAACCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCAGCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCGCCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGTCTCCTGCTCCATCCTCCACGGTACGTGCGTACATACTCTCCAGTCTCCATCTCTCTTCTGCTAACACCTGCACGTACAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGATGATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAAGAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAAGGCAGAAGCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGTCACCGCCATCCGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGTACAAAATGCGGCGACAAGCGGTAAGTGTAACTGACATGTAAT]

[-] EMBL AK109204             [TCAAGGGAAATTTTCAGCAATTTTCATGGTTACGGGTGTTCGTAAAAGTAATAACTGTATCTGTTCTGCTGTTGGCACGTGTGCAATGCAATGCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGGCGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGCGCCGGGTTCGCGGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAACCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCAGCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCGCCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGTCTCCTGCTCCATCCTCCACGGTACGTGCGTACATACTCTCCAGTCTCCATCTCTCTTCTGCTAACACCTGCACGTACAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGATGATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAAGAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAAGGCAGAAGCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGTCACCGCCATCCGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGTACAAAATGCGGCGACAAGCGGTAAGTGTAACTGACATGTAAT]


>consensus_2417#1 TCAAGGGAAATTTTCAGCAATTTTCATGGTTACGGGTGTTCGTAAAAGTAATAACTGTAT CTGTTCTGCTGTTGGCACGTGTGCAATGCAATGCAGGTGCATAGGAAGCTGGCCAGCGGC GGAGGCGGCGGCGGCGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGC GGCGCCGGGTTCGCGGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAG CTCAACAAGGTGAACCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAG TCGCTCCGCCGCCAGCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAG CAGCGCGACGGGCGCCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACG GAGGATCCCTCCGTCTCCTGCTCCATCCTCCACGGTACGTGCGTACATACTCTCCAGTCT CCATCTCTCTTCTGCTAACACCTGCACGTACAAAGACATGATTGCAAGGAGCCCTGACGA AGGAGACGATGATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAG GCCAAGAGAAGAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGT CACCTGCCAAGGCAGAAGCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGT CACCGCCATCCGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAG CGCCAACGGTACAAAATGCGGCGACAAGCGGTAAGTGTAACTGACATGTAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2417#0      ACTGCTACTCTCTCCATCAGTCCACAAAGAGGAAGGTGGAGGAAGAAGACCTGCAAGGTG 60
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      AGAGGAGGCCAATGGTGAAGTTCTCCAAGCAGTTCGAGGGCCAGCTTGTGCCCGAATGGA 120
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      AGGACGCCTTCGTGGACTACTGGCAGCTCAAGAAGGACATCAAGAGGCTGCAGGCTGCGG 180
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      AGGCGGAGGCGGCCGGGGTGGCGGCGACGACGCCGCTGTCGCAGTGCCAGGCGCCGGTGG 240
consensus_2417#1      ----------------------------------------------TCAAGGGAAATTTT 14
                                                                     ** * *    *  

consensus_2417#0      CGGCGGCTCACTGGGTCATGAGGCT--GCCGTTCTTGCACCCCCATGGACACCACCACAA 298
consensus_2417#1      CAGCAATTTTCATGGTTACGGGTGTTCGTAAAAGTAATAACTGTATCTGTTCTGCTGTTG 74
                      * **   *  *  *** * * *  *  *      *   * *   **     *  *     

consensus_2417#0      GGA---GCATGGTGCCATCCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGG 355
consensus_2417#1      GCACGTGTGCAATGCAATGCAGGTGCATAGGAAGCTGGCCAGCGGCGGAGGCGGCGGCGG 134
                      * *   *     *** ** *****************************************

consensus_2417#0      CGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGCGCCGGGTTCGC 415
consensus_2417#1      CGGCGCGGTGGCCGGAGAGGTGTACGAAACGGAGCTCGTGGACGGCGGCGCCGGGTTCGC 194
                      ************************************************************

consensus_2417#0      GGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAA 475
consensus_2417#1      GGACGGCGAGGCGGCGAGGGCCTTCTTCGCGAGGCTGGACGAGCAGCTCAACAAGGTGAA 254
                      ************************************************************

consensus_2417#0      CCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCA 535
consensus_2417#1      CCGCTTCTACGAGCGGAAGGAGGCCGAGTTCGTGGAGCGCGGCGAGTCGCTCCGCCGCCA 314
                      ************************************************************

consensus_2417#0      GCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCG 595
consensus_2417#1      GCTGCAGATCCTCGCCGAGCTCCGGGCCGCCGTCGTCGCCGAGCAGCAGCGCGACGGGCG 374
                      ************************************************************

consensus_2417#0      CCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGT 655
consensus_2417#1      CCGCCGCCGATGCGGCAACGGCGGCGACTCCTCGCCGCCGGACACGGAGGATCCCTCCGT 434
                      ************************************************************

consensus_2417#0      CTCCTGCTCCATCCTCCACGGAGATCAGTCCCTCAGAGGCACTTCTGAG-CAAGAACAGG 714
consensus_2417#1      CTCCTGCTCCATCCTCCACGG----TACGTGCGTACATACTCTCCAGTCTCCATCTCTCT 490
                      *********************     *    *  * *  * ** * *   * *   *   

consensus_2417#0      AAGGCCAGGAAAAGCTCAC-CAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGAT 773
consensus_2417#1      TCTGCTAACACCTGCACGTACAAAGACATGATTGCAAGGAGCCCTGACGAAGGAGACGAT 550
                         ** *  *   ** *   ****************************************

consensus_2417#0      GATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAA 833
consensus_2417#1      GATCAGCTCACCATCCCTCAAGAATTGGGCGATTCAGGGAGGCTTGGCAGGCCAAGAGAA 610
                      ************************************************************

consensus_2417#0      GAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAA 893
consensus_2417#1      GAAGCCGCCAACACCAGGCCGAGGACGACGCTCCCAGGAGGCAGGGCGGTCACCTGCCAA 670
                      ************************************************************

consensus_2417#0      GGCAGAAGCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGTCACCGCCATC 953
consensus_2417#1      GGCAGAAGCGTCAGGATCAACATCCCGGTGACCACGCCGACGAGGACCGTCACCGCCATC 730
                      ************************************************************

consensus_2417#0      CGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGT 1013
consensus_2417#1      CGTGAGCTTCTGTTCGACGACATGCTAAGCCAGTCGAGGAGGAGCGGTAGCGCCAACGGT 790
                      ************************************************************

consensus_2417#0      ACAAAATGCGGCGACAAGC--TGAGCATCAACAAGAGGAAGGTGCATCAGGCAGAGAAGA 1071
consensus_2417#1      ACAAAATGCGGCGACAAGCGGTAAGTGTAACTGACATGTAAT------------------ 832
                      *******************  * **  * *   * * * *                    

consensus_2417#0      TGATAAGGGGTGCCCTGATTGAGCTGTACAAGGGATTGGGGTATCTCAAGACATACCGGA 1131
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      GCTTAAACATGATGGCGTTTGTGAAGATTTTGAAGAAATTTGACAAGGTTACAGCAAAGG 1191
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      AAGCTCAGTCAATATACCTTAAAGTAGTGGAGAGCTCCTACTTCAATGTCTCTGACAAGG 1251
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TAATTAGGCTAATGGACGATGTGGATGAGCTGTTTGTGAGGCATTTTGCAGAAGGTGACA 1311
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      AACGGAAAGCAATGAAGTATCTTAAGCCAAATCAGAGGGAAGAATCACACACCACAACAT 1371
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TTTTCATAGGGCTATTCACTGGTGGCTTTGCAGCATTATTCATTGGTTATTGTATCATGG 1431
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      CACACATTGCTGGGATGTACACCCAGCAGTCAAACAAGGTCTACATGGCAACATCATATC 1491
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      CTGTCCTGAGCATGTTCAGCCTCTTCTTTCTGCATCTCTTCCTCTACGGATGCAACATCT 1551
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TCATGTGGAGAAAGACACGCATAAACTACACATTCATATTTGAATTCACGCCTACCAAAG 1611
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      AGCTGAAGTATCGTGATGTGTTCCTGATTTGCACTACTTCCATGACAATTGTCATTGGTG 1671
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TTATGTTTGCACACCTGACACTCATTGTCAAAGGGTATTCGTCATGTGCAGTCCAAGCAA 1731
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TACCAGGAGCTCTACTTCTGGTTTTCTTGCTAATATTGGTCTGCCCTTTCAACATACTCT 1791
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      ACCGATCATGTCGTTACCACTTCCTAACAGTGATCAGAAACATCATTCTAACCCCTTTCT 1851
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      ACAAGGTTGTCATGGTTGATTTCTTCATGGCTGATCAGCTTTGCAGCCAGGTACCACTGC 1911
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TTAGGAGCCTAGAGTATCTGGCGTGCTATTACATAACCAGCAGGCTACAAGACACAAGAC 1971
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TATGGCTACTGCACCAGAGTGAAGCACTTTAGAGATTTGGCTTATGCAGTATCCTTCCTA 2031
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      CCTTACTACTGGAGGGCCATGCAGTGCGCAAGGAGATGGTTTGACGAGGGGGACATAAAT 2091
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      CACATTGTCAACCTTGGGAAGTATGTGTCAGCAATGCTTGCTGCTGGAACAAAAGTGGCA 2151
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TACGAGAATGATAACAGTGCTGGATGGCTGTCACTTGTTGTCATTGTGTCGAGTCTCGCC 2211
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      ACTATCTACCAACTATACTGGGACTTTGTCAAGGATTGGGGTCTTCTGCAGTTTAACTCC 2271
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      AAGAACCCTTGGCTCCGTAATGATCTGATACTCAAACAAAAGTACATCTATTTCCTTTCC 2331
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      ATGGGTCTGAACATTATCTTGAGGCTGGCATGGCTTCAGACCGTCATCCACCCTAACATC 2391
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      GGAAGCCTGGATTCCAGAGTAACTTTGTTCATCTTGGCAGCTCTTGAGGTGATTCGACGA 2451
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      GGCCACTGGAACTTCTACAGGTTGGAAAACGAGCACCTAAACAATGCAGGGAAATTCAGA 2511
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      GCTGTGAAGGTTGTTCCACTTCCTTTTCATGAAGTGGAAGAGGACTAACAAAATAGGGCA 2571
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TCATCATCATCATTGCAGCAGATTCTAGGGATTCAGAACTCTAAGCAGTTCAGATGTAAC 2631
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      ACCAACTAATGTTAGAAAGCCTGCACTACCCTATTATGATTCAATTAAATTTTTTGGTGT 2691
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      GAGGAATAATGGGCATTTAACATGTTCAGTTTGGAGAAGATACAAGCAAAAGGCAAACAC 2751
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      TATATAGATGTAGAATACAGGGGTTCCAATTAGTTTACCAAGATCGAATACTAATCTCGT 2811
consensus_2417#1      ------------------------------------------------------------
                                                                                  

consensus_2417#0      GGAGTTGAAGCGAATTCACTTGTGGAAAAATCCAATCAATCACAATTGTTCT 2863
consensus_2417#1      ----------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)