cluster # 2422

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Oryza sativa
cluster # 2422 cluster # 2422 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2422#0 length = 1313 sequences # 2
consensusID : consensus_2422#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1313
fasta sequence
                              [GCCCCTCCACATCACACACACGACGCCATCGCCATGGCCAACTCCAGCTGCCCCTCCACCTCTCCCGCCGCGCTACGCCTCGCGCGCCCCAAGCTCCCGGACTCCGCCATGATCATGCAGCTCCAGCTCCAGCTCCAGCACGCGCCCCTGTTCCCCCGCCCGCCCGCGGCGCGCGCGCACCACCACCACCACCACCAGCGACGCCTCCTGCTCGCGGTCTCCGACCACGTCGCCGCCAAGCCCGTCACCGTGCCGGTGGGGAGGATGCGCATGCGCGCGGCGACGGCGATGGTCTCGCAGGAGGAGGCCGCGGCCACGGCTGTGGAGGAGCAACAGGAGGAGGAGGTCGAAGAGGAGCAGTTGCAAGAGGAAGACGGAGCAGCTGTGCAGGAGGAGGAGCAGGGCGGCGTCCTGGAGGGCAGCTCGGGCGGCGGCGAGGCGGAGGCGGAGGCAGCGGGCATCACCACCAAGCTCTACTTCGGGAACCTGCCGTACAACTGCGACAGCGCGCAGCTCGCCGGCATTGTGCAGGACTACGCCACCCCGGAGATGGTGGAGGTGTTGTACGATCGGGCGACAGGGAGGAGCCGAGGCTTCGCGTTCGTGACGATGAGCACCATCGAAGACTGCGAGCAAGTGATCAAGAACCTCGACGGCAGCCTGTACAGTGGGCGCACGATGAGGGTGAACTTCGCGGACAAGCCCAAGCCGAAGCTGCCGCTGTACCCGGAGACTGAGCACAAGCTGTTCGTCGGCAACCTGTCGTGGACGGTCACCTCGGAGATGCTGACGGAGATGTTCCAGAAGTGCGGCAACGTGGTCGGCGCCCGGGTGCTCTACGACGGCGAGACCGGCCGGTCCCGTGGCTACGGCTTCGTCTGCTACTCCACCAAGGAGGAGATGGATGAAGCTCTTTCCTCGCTCAATGGAACGGAACTAGAAGGCAGGGAGATCCGGGTCAACCTCGCCCTTGGAAAGAAATAATCAAAGAGTAATAGATTTACTTCACATGCACAGGAGAAACTTGCAATACAATGCAATGCTGCCTTCAGATGCGATTTTCAGGCAACCATGGATGCAGCGATTACTTGTTTGAGCGCATCGCAAGACGGCAAGAGCAGGCACAGGAAGAATGTATTGTTCTGAGTTACAGCAGATGTATCTC-TTTTTTTTAACGAATCAGATGTATCTTTTGTATGCATGGGAAATTTATTAGTTTCTATCAGTCGTTTATCTGATAGAAGCTTGACTGAACATTGAACAGTTTTAGTCTGCTGGGGTTATCAGTCAGTTCCATTCTCTTGGAGCTGCAT]

[+] EMBL AK067252             [GCCCCTCCACATCACACACACGACGCCATCGCCATGGCCAACTCCAGCTGCCCCTCCACCTCTCCCGCCGCGCTACGCCTCGCGCGCCCCAAGCTCCCGGACTCCGCCATGATCATGCAGCTCCAGCTCCAGCTCCAGCACGCGCCCCTGTTCCCCCGCCCGCCCGCGGCGCGCGCGCACCACCACCACCACCACCAGCGACGCCTCCTGCTCGCGGTCTCCGACCACGTCGCCGCCAAGCCCGTCACCGTGCCGGTGGGGAGGATGCGCATGCGCGCGGCGACGGCGATGGTCTCGCAGGAGGAGGCCGCGGCCACGGCTGTGGAGGAGCAACAGGAGGAGGAGGTCGAAGAGGAGCAGTTGCAAGAGGAAGACGGAGCAGCTGTGCAGGAGGAGGAGCAGGGCGGCGTCCTGGAGGGCAGCTCGGGCGGCGGCGAGGCGGAGGCGGAGGCAGCGGGCATCACCACCAAGCTCTACTTCGGGAACCTGCCGTACAACTGCGACAGCGCGCAGCTCGCCGGCATTGTGCAGGACTACGCCACCCCGGAGATGGTGGAGGTGTTGTACGATCGGGCGACAGGGAGGAGCCGAGGCTTCGCGTTCGTGACGATGAGCACCATCGAAGACTGCGAGCAAGTGATCAAGAACCTCGACGGCAGCCTGTACAGTGGGCGCACGATGAGGGTGAACTTCGCGGACAAGCCCAAGCCGAAGCTGCCGCTGTACCCGGAGACTGAGCACAAGCTGTTCGTCGGCAACCTGTCGTGGACGGTCACCTCGGAGATGCTGACGGAGATGTTCCAGAAGTGCGGCAACGTGGTCGGCGCCCGGGTGCTCTACGACGGCGAGACCGGCCGGTCCCGTGGCTACGGCTTCGTCTGCTACTCCACCAAGGAGGAGATGGATGAAGCTCTTTCCTCGCTCAATGGAACGGAACTAGAAGGCAGGGAGATCCGGGTCAACCTCGCCCTTGGAAAGAAATAATCAAAGAGTAATAGATTTACTTCACATGCACAGGAGAAACTTGCAATACAATGCAATGCTGCCTTCAGATGCGATTTTCAGGCAACCATGGATGCAGCGATTACTTGTTTGAGCGCATCGCAAGACGGCAAGAGCAGGCACAGGAAGAATGTATTGTTCTGAGTTACAGCAGATGTATCTC TTTTTTTTAACGAATCAGATGTATCTTTTGTATGCATGGGAAATTTATTAGTTTCTATCAGTCGTTTATCTGATAGAAGCTTGACTGAACATTGAACAGTTTTAGTCTGCTGGGGTTATCAGTCAGTTCCATTCTCTTGGAGCTGCAT]
[+] EMBL AK104489             [ CCCCTCCACATCACACACACGACGCCATCGCCATGGCCAACTCCAGCTGCCCCTCCACCTCTCCCGCCGCGCTACGCCTCGCGCGCCCCAAGCTCCCGGACTCCGCCATGATCATGCAGCTCCAGCTCCAGCTCCAGCACGCGCCCCTGTTCCCCCGCCCGCCCGCGGCGCGCGCGCACCACCACCACCACCACCAGCGACGCCTCCTGCTCGCGGTCTCCGACCACGTCGCCGCCAAGCCCGTCACCGTGCCGGTGGGGAGGATGCGCATGCGCGCGGCGACGGCGATGGTCTCGCAGGAGGAGGCCGCGGCCACGGCTGTGGAGGAGCAACAGGAGGAGGAGGTCGAAGAGGAGCAGTTGCAAGAGGAAGACGGAGCAGCTGTGCAGGAGGAGGAGCAGGGCGGCGTCCTGGAGGGCAGCTCGGGCGGCGGCGAGGCGGAGGCGGAGGCAGCGGGCATCACCACCAAGCTCTACTTCGGGAACCTGCCGTACAACTGCGACAGCGCGCAGCTCGCCGGCATTGTGCAGGACTACGCCACCCCGGAGATGGTGGAGGTGTTGTACGATCGGGCGACAGGGAGGAGCCGAGGCTTCGCGTTCGTGACGATGAGCACCATCGAAGACTGCGAGCAAGTGATCAAGAACCTCGACGGCAGCCTGTACAGTGGGCGCACGATGAGGGTGAACTTCGCGGACAAGCCCAAGCCGAAGCTGCCGCTGTACCCGGAGACTGAGCACAAGCTGTTCGTCGGCAACCTGTCGTGGACGGTCACCTCGGAGATGCTGACGGAGATGTTCCAGAAGTGCGGCAACGTGGTCGGCGCCCGGGTGCTCTACGACGGCGAGACCGGCCGGTCCCGTGGCTACGGCTTCGTCTGCTACTCCACCAAGGAGGAGATGGATGAAGCTCTTTCCTCGCTCAATGGAACGGAACTAGAAGGCAGGGAGATCCGGGTCAACCTCGCCCTTGGAAAGAAATAATCAAAGAGTAATAGATTTACTTCACATGCACAGGAGAAACTTGCAATACAATGCAATGCTGCCTTCAGATGCGATTTTCAGGCAACCATGGATGCAGCGATTACTTGTTTGAGCGCATCGCAAGACGGCAAGAGCAGGCACAGGAAGAATGTATTGTTCTGAGTTACAGCAGATGTATCTCTTTTTTTTTAACGAATCAGATGTATCTTTTGTATGCATGGGAAATTTATTAGTTTCTATCAGTCGTTTATCTGATAGAAGCTTGACTGAACATTGAACAGTTTTAGTCTGCTGGGGTTATCAGTCAGTTCCATTCTCTTGGAGCT    ]




>consensus_2422#0
GCCCCTCCACATCACACACACGACGCCATCGCCATGGCCAACTCCAGCTGCCCCTCCACC
TCTCCCGCCGCGCTACGCCTCGCGCGCCCCAAGCTCCCGGACTCCGCCATGATCATGCAG
CTCCAGCTCCAGCTCCAGCACGCGCCCCTGTTCCCCCGCCCGCCCGCGGCGCGCGCGCAC
CACCACCACCACCACCAGCGACGCCTCCTGCTCGCGGTCTCCGACCACGTCGCCGCCAAG
CCCGTCACCGTGCCGGTGGGGAGGATGCGCATGCGCGCGGCGACGGCGATGGTCTCGCAG
GAGGAGGCCGCGGCCACGGCTGTGGAGGAGCAACAGGAGGAGGAGGTCGAAGAGGAGCAG
TTGCAAGAGGAAGACGGAGCAGCTGTGCAGGAGGAGGAGCAGGGCGGCGTCCTGGAGGGC
AGCTCGGGCGGCGGCGAGGCGGAGGCGGAGGCAGCGGGCATCACCACCAAGCTCTACTTC
GGGAACCTGCCGTACAACTGCGACAGCGCGCAGCTCGCCGGCATTGTGCAGGACTACGCC
ACCCCGGAGATGGTGGAGGTGTTGTACGATCGGGCGACAGGGAGGAGCCGAGGCTTCGCG
TTCGTGACGATGAGCACCATCGAAGACTGCGAGCAAGTGATCAAGAACCTCGACGGCAGC
CTGTACAGTGGGCGCACGATGAGGGTGAACTTCGCGGACAAGCCCAAGCCGAAGCTGCCG
CTGTACCCGGAGACTGAGCACAAGCTGTTCGTCGGCAACCTGTCGTGGACGGTCACCTCG
GAGATGCTGACGGAGATGTTCCAGAAGTGCGGCAACGTGGTCGGCGCCCGGGTGCTCTAC
GACGGCGAGACCGGCCGGTCCCGTGGCTACGGCTTCGTCTGCTACTCCACCAAGGAGGAG
ATGGATGAAGCTCTTTCCTCGCTCAATGGAACGGAACTAGAAGGCAGGGAGATCCGGGTC
AACCTCGCCCTTGGAAAGAAATAATCAAAGAGTAATAGATTTACTTCACATGCACAGGAG
AAACTTGCAATACAATGCAATGCTGCCTTCAGATGCGATTTTCAGGCAACCATGGATGCA
GCGATTACTTGTTTGAGCGCATCGCAAGACGGCAAGAGCAGGCACAGGAAGAATGTATTG
TTCTGAGTTACAGCAGATGTATCTCTTTTTTTTAACGAATCAGATGTATCTTTTGTATGC
ATGGGAAATTTATTAGTTTCTATCAGTCGTTTATCTGATAGAAGCTTGACTGAACATTGA
ACAGTTTTAGTCTGCTGGGGTTATCAGTCAGTTCCATTCTCTTGGAGCTGCAT
clustalw multiple alignements is not computed in this case