cluster # 2447

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Oryza sativa
cluster # 2447 cluster # 2447 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2447#0 length = 1161 sequences # 2

consensusID : consensus_2447#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1161
fasta sequence

                              [TTCGTCACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATGATGAACTGGCAATTGAAAGTATGAGGATGCTGGATCAAAATAATAGTGATGCGGAGAATTTGTATGTGGGACCGACATTTCAGGATCTTGATGAGAGCTTGCAGAAGGCCTTGCACCGGTATCTCGAAGTGAGGGGAATCAAGCACTCACTGCATGACTGGCTGTGCGAGTACATGATGAGCAAGGATGAGAAGGAGTATCTGGTTTGGTTGAAGAGCATGAAAGAATTCGTTGGGAATTGAGTGCCGGTGCGTAATGTTTGTCCCTCATAATTATCCAGAGCTACATTGCATAGAAGTCACGTTTGGTGAAAGACCATATGGTGGTTTTATTTGTCATAAATCCTTGCTGCTGTTACCCAGCACTGTTTGCTACTAGCTAGCTCGCCTTTTATTTAATCCCTTTGATCTTTGGATGATTGTGATTATTTTGCTCTTGTGCGTGGAGTTTTTGAGTACTTACTGTCGAAGTGTCATCATAATTTCAACGTGCTGTCTCCACACCTTCTCCAGAAATTATTCTGTTTTGTGCATTCGTGCACGCATTGTGCGTTCACAATGG]

[+] EMBL AK068142             [TTCGTCACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATGATGAACTGGCAATTGAAAGTATGAGGATGCTGGATCAAAATAATAGTGATGCGGAGAATTTGTATGTGGGACCGACATTTCAGGATCTTGATGAGAGCTTGCAGAAGGCCTTGCACCGGTATCTCGAAGTGAGGGGAATCAAGCACTCACTGCATGACTGGCTGTGCGAGTACATGATGAGCAAGGATGAGAAGGAGTATCTGGTTTGGTTGAAGAGCATGAAAGAATTCGTTGGGAATTGAGTGCCGGTGCGTAATGTTTGTCCCTCATAATTATCCAGAGCTACATTGCATAGAAGTCACGTTTGGTGAAAGACCATATGGTGGTTTTATTTGTCATAAATCCTTGCTGCTGTTACCCAGCACTGTTTGCTACTAGCTAGCTCGCCTTTTATTTAATCCCTTTGATCTTTGGATGATTGTGATTATTTTGCTCTTGTGCGTGGAGTTTTTGAGTACTTACTGTCGAAGTGTCATCATAATTTCAACGTGCTGTCTCCACACCTTCTCCAGAAATTATTCTGTTTTGTGCATTCGTGCACGCATTGTGCGTTCACAATGG]
[+] EMBL AK071483             [      ACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCAGCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCGCCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCTCCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGTCGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGATCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAGAAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAGAAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGAATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGGTCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_2447#0
TTCGTCACCGCCGAATCCCCCAGCAGCCAGCCATGTCGTCGTCGGCGTCGCGCGCCGCCA
GCCTCCTCCGCCGCACATCCTCCGCCCTGTCCCGCCGCTGCGCCCACTCCTCCTCCGCCG
CCGCGCCGTCCCGCCCGCCCGTTCCGCTCCCACGTTTCCGCGCCGCCGCCGCCGCCGCCT
CCTCCTCGCCGTCCTCTGGGATCACCTCCCGCCGCTTCCTCGCGTCGAAATCCCCGTCGT
CGTCGTCGCCCTCCAAGGCCTCCGCCGACGAGAACCTGGTGCGGGTCATCGACTCCGAGA
TCGAGTGCATTGTTCAGTCGGAGGAGGGCGCCGCCTCCGCGAAGCAAATTGATCTACCAG
AAGACTTCCCTTTTGAGATAATCGACAATCCTGGTGACCAATCCATAACACTCAAAAGAG
AAATTGCAGGAGAGACTATTAAAGCTACTGTCTACACAAACTTTGATACACAAGATTTGA
ATGAGGATGGCGATGATAATGAGAACAATGAGGAATCTTTTAAGCCAGCAATCCAGATGG
TCGTCACTGTTGAGAAACCAGAAGCCTCCATCTTGGAATTTGAATGCCACTTCAATGATG
ATGAACTGGCAATTGAAAGTATGAGGATGCTGGATCAAAATAATAGTGATGCGGAGAATT
TGTATGTGGGACCGACATTTCAGGATCTTGATGAGAGCTTGCAGAAGGCCTTGCACCGGT
ATCTCGAAGTGAGGGGAATCAAGCACTCACTGCATGACTGGCTGTGCGAGTACATGATGA
GCAAGGATGAGAAGGAGTATCTGGTTTGGTTGAAGAGCATGAAAGAATTCGTTGGGAATT
GAGTGCCGGTGCGTAATGTTTGTCCCTCATAATTATCCAGAGCTACATTGCATAGAAGTC
ACGTTTGGTGAAAGACCATATGGTGGTTTTATTTGTCATAAATCCTTGCTGCTGTTACCC
AGCACTGTTTGCTACTAGCTAGCTCGCCTTTTATTTAATCCCTTTGATCTTTGGATGATT
GTGATTATTTTGCTCTTGTGCGTGGAGTTTTTGAGTACTTACTGTCGAAGTGTCATCATA
ATTTCAACGTGCTGTCTCCACACCTTCTCCAGAAATTATTCTGTTTTGTGCATTCGTGCA
CGCATTGTGCGTTCACAATGG

clustalw multiple alignements is not computed in this case