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Oryza sativa
cluster # 2454 cluster # 2454       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2454#0 length = 997 sequences # 2  

consensusID : consensus_2454#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 997
fasta sequence
                              [CTCCTCCCCTCGGCAACGTAACACAAGAGAAGAAGAGATCGCCATGTCCAACGTGCCCACCTCCCTCCGCGACTCCTCCCTCACCGTCTTCCGCCTCGCCATCTCCAGCTCCGACCCCTGGCCCTTCTCCCTTTAACCCCATCAAACGCTTCTTCCTCTTCCAAGAAGATCACAAGCTTCTTCGTGTTCTTGTTCTTCTTCGGATCACTCGGTTGGTTTCTTGGTTTCTTGGTTTCTTGGATTGTTGCGAGATGCACGGGAAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGGGGGGGATGGTGGTGGTGGCGCCGAAGGGGTGCGTGACGGTGAGGGTGGGGGCGGAGGGGGAGGAGCAGCGGCGGTTCGCCGTGCCGCTCGCCCACCTCAAGCACCCGCTCTTCGGGGCGCTGCTCGAGGAGGCCGAGCGCGAGTACGGCTTCGCGCAGCGGGGCGCCATCGCCATCCCCTGCCGCGTCGACCGCTTCGTCCACGTCGAGCACCTCATCGTCCAGGACCTCCACGGCGCCGCCGCCTCCCACCTCCTCGACCTCGACTCCTCCTCCCACCACCACACCCAGATCCACCTCCACCTCCCCCGCTTCGCCGGTTGCTTCCGCGCCTGATCCTTCCATCATCTCCATGGATGCATCGCCATGGCGGTGGAGCGGAGCTCCCAGATTGCTCTTCTTCTTCTTCTTCAGGGTTGGTTGGTCGATTAATTACTTAGTTTAGCTAGTTTTTTGGTTTCCTTTTGCTTCGTCCTCCGATCTCTCGGTTTGTTGGGGATGGATTTCGATTGGGTTTGTGGACGGGAGAATCGGAGGACGGATTCGATGCTGATGACGACGAAAAATTGAGATCGATCTCAAAAGTGTAAAGACAGAGTAATTCTTCTTAGTAGCTTTATTCTAGTTTTATTTTTTTTATCTTTTTTCTTTGCTTGTACATCCACTTCTTGAAACACATCAATAATACAGTATACTTTGATCGA]

[+] EMBL AK068270             [CTCCTCCCCTCGGCAACGTAACACAAGAGAAGAAGAGATCGCCATGTCCAACGTGCCCACCTCCCTCCGCGACTCCTCCCTCACCGTCTTCCGCCTCGCCATCTCCAGCTCCGACCCCTGGCCCTTCTCCCTTTAACCCCATCAAACGCTTCTTCCTCTTCCAAGAAGATCACAAGCTTCTTCGTGTTCTTGTTCTTCTTCGGATCACTCGGTTGGTTTCTTGGTTTCTTGGTTTCTTGGATTGTTGCGAGATGCACGGGAAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGGGGGGGATGGTGGTGGTGGCGCCGAAGGGGTGCGTGACGGTGAGGGTGGGGGCGGAGGGGGAGGAGCAGCGGCGGTTCGCCGTGCCGCTCGCCCACCTCAAGCACCCGCTCTTCGGGGCGCTGCTCGAGGAGGCCGAGCGCGAGTACGGCTTCGCGCAGCGGGGCGCCATCGCCATCCCCTGCCGCGTCGACCGCTTCGTCCACGTCGAGCACCTCATCGTCCAGGACCTCCACGGCGCCGCCGCCTCCCACCTCCTCGACCTCGACTCCTCCTCCCACCACCACACCCAGATCCACCTCCACCTCCCCCGCTTCGCCGGTTGCTTCCGCGCCTGATCCTTCCATCATCTCCATGGATGCATCGCCATGGCGGTGGAGCGGAGCTCCCAGATTGCTCTTCTTCTTCTTCTTCAGGGTTGGTTGGTCGATTAATTACTTAGTTTAGCTAGTTTTTTGGTTTCCTTTTGCTTCGTCCTCCGATCTCTCGGTTTGTTGGGGATGGATTTCGATTGGGTTTGTGGACGGGAGAATCGGAGGACGGATTCGATGCTGATGACGACGAAAAATTGAGATCGATCTCAAAAGTGTAAAGACAGAGTAATTCTTCTTAGTAGCTTTATTCTAGTTTTATTTTTTTTATCTTTTTTCTTTGCTTGTACATCCACTTCTTGAAACACATCAATAATACAGTAT           ]
[+] EMBL AK109491             [  CCTCCCCTCGGCAACGTAACACAAGAGAAGAAGAGATCGCCATGTCCAACGTGCCCACCTCCCTCCGCGACTCCTCCCTCACCGTCTTCCGCCTCGCCATCTCCAGCTCCGACCCCTGGCCCTTCTCCCTTTAACCCCATCAAACGCTTCTTCCTCTTCCAAGAAGATCACAAGCTTCTTCGTGTTCTTGTTCTTCTTCGGATCACTCGGTTGGTTTCTTGGTTTCTTGGTTTCTTGGATTGTTGCGAGATGCACGGGAAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGGGGGGGATGGTGGTGGTGGCGCCGAAGGGGTGCGTGACGGTGAGGGTGGGGGCGGAGGGGGAGGAGCAGCGGCGGTTCGCCGTGCCGCTCGCCCACCTCAAGCACCCGCTCTTCGGGGCGCTGCTCGAGGAGGCCGAGCGCGAGTACGGCTTCGCGCAGCGGGGCGCCATCGCCATCCCCTGCCGCGTCGACCGCTTCGTCCACGTCGAGCACCTCATCGTCCAGGACCTCCACGGCGCCGCCGCCTCCCACCTCCTCGACCTCGACTCCTCCTCCCACCACCACACCCAGATCCACCTCCACCTCCCCCGCTTCGCCGGTTGCTTCCGCGCCTGATCCTTCCATCATCTCCATGGATGCATCGCCATGGCGGTGGAGCGGAGCTCCCAGATTGC   TCTTCTTCTTCTTCAGGGTTGGTTGGTCGATTAATTACTTAGTTTAGCTAGTTTTTTGGTTTCCTTTTGCTTCGTCCTCCGATCTCTCGGTTTGTTGGGGATGGATTTCGATTGGGTTTGTGGACGGGAGAATCGGAGGACGGATTCGATGCTGATGACGACGAAAAATTGAGATCGATCTCAAAAGTGTAAAGACAGAGTAATTCTTCTTAGTAGCTTTATTCTAGTTTTATTTTTTTTATCTTTTTTCTTTGCTTGTACATCCACTTCTTGAAACACATCAATAATACAGTATACTTTGATCGA]


>consensus_2454#0 CTCCTCCCCTCGGCAACGTAACACAAGAGAAGAAGAGATCGCCATGTCCAACGTGCCCAC CTCCCTCCGCGACTCCTCCCTCACCGTCTTCCGCCTCGCCATCTCCAGCTCCGACCCCTG GCCCTTCTCCCTTTAACCCCATCAAACGCTTCTTCCTCTTCCAAGAAGATCACAAGCTTC TTCGTGTTCTTGTTCTTCTTCGGATCACTCGGTTGGTTTCTTGGTTTCTTGGTTTCTTGG ATTGTTGCGAGATGCACGGGAAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGGGGGGGA TGGTGGTGGTGGCGCCGAAGGGGTGCGTGACGGTGAGGGTGGGGGCGGAGGGGGAGGAGC AGCGGCGGTTCGCCGTGCCGCTCGCCCACCTCAAGCACCCGCTCTTCGGGGCGCTGCTCG AGGAGGCCGAGCGCGAGTACGGCTTCGCGCAGCGGGGCGCCATCGCCATCCCCTGCCGCG TCGACCGCTTCGTCCACGTCGAGCACCTCATCGTCCAGGACCTCCACGGCGCCGCCGCCT CCCACCTCCTCGACCTCGACTCCTCCTCCCACCACCACACCCAGATCCACCTCCACCTCC CCCGCTTCGCCGGTTGCTTCCGCGCCTGATCCTTCCATCATCTCCATGGATGCATCGCCA TGGCGGTGGAGCGGAGCTCCCAGATTGCTCTTCTTCTTCTTCTTCAGGGTTGGTTGGTCG ATTAATTACTTAGTTTAGCTAGTTTTTTGGTTTCCTTTTGCTTCGTCCTCCGATCTCTCG GTTTGTTGGGGATGGATTTCGATTGGGTTTGTGGACGGGAGAATCGGAGGACGGATTCGA TGCTGATGACGACGAAAAATTGAGATCGATCTCAAAAGTGTAAAGACAGAGTAATTCTTC TTAGTAGCTTTATTCTAGTTTTATTTTTTTTATCTTTTTTCTTTGCTTGTACATCCACTT CTTGAAACACATCAATAATACAGTATACTTTGATCGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)