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Oryza sativa
cluster # 2472 cluster # 2472       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2472#0 length = 1169 sequences # 2  

consensusID : consensus_2472#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1169
fasta sequence
                              [GCCACCACAAAGACGAGGCCCCCGTCCTCCGCCGCTCGTCGACGGCATGCAGCAGCAGGGCGCCGCCGCGCTCACGCCGGCGACCGGCCTCGGGAGCCGGCCATCCCTCACCGTCAAAACCAGCCGCGTGTGCACCACCGCTGCTCTCCCTCCCCTCTGCCGCTGTGGCCGGCGCCACCTCATCGGCTCCACCTCGGCCACCGCTCTCCTCCCCCTGCTCGCCCTCCCGTCGCCCGCCGCCTCGCCCGTCGACCCCGAAGTGATGCTTGAGCGGGTGCACCCTGCCAGGCCGGAGTGGTACGAGAAGTTCTATGCCACGGCCATGGACAAGTTCATGAAACCTTACGAGGCTGAGATTGCACAGTATAAATCAAAGCTCTTTTCCCAATTGATGACTGCTGGGAAGAACATTCTTGAACTTGGTGTTGGAACAGGCCCTAATCTCAAGTACTATGCAAATGCCGATGGCGTTAACATAGTTGGGGTGGATCCTAATAAACACATGGAGGAGTATGCCAGAGCAGCTGCAGTGTCTGCTGGAC-TTCCACCTTCGAACTTCACCTTCAGAAGAGGGGTTGGTGAAGCTTTGCCAGCTGAGGACAATTCAATGGATGCTGTTGTTGGCACTCTGGTAATGTGTTCTGTAAGTGACGTTGAAATGGCATTGAGAGAAATAAAACGAGTCCTGAAGCCTGGTGGTCTCTACATATTCATTGAGCATGTTGCTGCGCCTGATGGATCCTTCCTCCGATTCGTGCAAGGTGCCCTTAATCCTCTGCAGCAGTTTGTCTCTGACGGGTGCCACCTCACCAGAGAAACAGGCGAAATCATCAGGGATGCTGGGTTCTCGAGCTTGGACCTGAACACGACTCGCTTGTCTACTGCATTTATCCTCAGCCCCCATGTTTATGGAGTAGCATGTAAATGATATTTCCTCTCCTTTCGTTGTTCCATCTAATTGTGTAAATTGTTATTTGTCAGCAATATGAGCTACAGTATCACGCTAGGTTTCCAAGGCTGAATATTCCATGCCACACGTTAGATGGGCTGGTCTTCAGAAATGGCTGGATGCCTCGAAGATATTAAATGGGCCTTTTCTGTTAACATTTCGTTGCTGTTGGGCTGGGCCCGTGTCCTGTCTGCTGATTTCTTGCAAAAAAAAAAAAAGA]

[+] EMBL AK061274             [GCCACCACAAAGACGAGGCCCCCGTCCTCCGCCGCTCGTCGACGGCATGCAGCAGCAGGGCGCCGCCGCGCTCACGCCGGCGACCGGCCTCGGGAGCCGGCCATCCCTCACCGTCAAAACCAGCCGCGTGTGCACCACCGCTGCTCTCCCTCCCCTCTGCCGCTGTGGCCGGCGCCACCTCATCGGCTCCACCTCGGCCACCGCTCTCCTCCCCCTGCTCGCCCTCCCGTCGCCCGCCGCCTCGCCCGTCGACCCCGAAGTGATGCTTGAGCGGGTGCACCCTGCCAGGCCGGAGTGGTACGAGAAGTTCTATGCCACGGCCATGGACAAGTTCATGAAACCTTACGAGGCTGAGATTGCACAGTATAAATCAAAGCTCTTTTCCCAATTGATGACTGCTGGGAAGAACATTCTTGAACTTGGTGTTGGAACAGGCCCTAATCTCAAGTACTATGCAAATGCCGATGGCGTTAACATAGTTGGGGTGGATCCTAATAAACACATGGAGGAGTATGCCAGAGCAGCTGCAGTGTCTGCTGGAC TTCCACCTTCGAACTTCACCTTCAGAAGAGGGGTTGGTGAAGCTTTGCCAGCTGAGGACAATTCAATGGATGCTGTTGTTGGCACTCTGGTAATGTGTTCTGTAAGTGACGTTGAAATGGCATTGAGAGAAATAAAACGAGTCCTGAAGCCTGGTGGTCTCTACATATTCATTGAGCATGTTGCTGCGCCTGATGGATCCTTCCTCCGATTCGTGCAAGGTGCCCTTAATCCTCTGCAGCAGTTTGTCTCTGACGGGTGCCACCTCACCAGAGAAACAGGCGAAATCATCAGGGATGCTGGGTTCTCGAGCTTGGACCTGAACACGACTCGCTTGTCTACTGCATTTATCCTCAGCCCCCATGTTTATGGAGTAGCATGTAAATGATATTTCCTCTCCTTTCGTTGTTCCATCTAATTGTGTAAATTGTTATTTGTCAGCAATATGAGCTACAGTATCACG                                                                                                                                                                      ]
[-] EMBL CA762557             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TAG TGGGG GGGTCCTAAT AACCCATGGAGGAGT TGCCAGAGCAGCTCCAGTGTTTCCT GACGTTCCGCATGGGAAGTTCCCCTCCAGAAGAGGGGTGGGTGAAGCTTTGCCAGCGGAGGGCAATTCAATGGGTGCTGCTGTTGGCACTCTGGTAATGTGTTCTGTAAGTGACGTTGAAATGGCATTGAGAGAAATAAAACGAGTCCTGAAGCCTGGTGGTCTCTACATATTCATTGAGCATGTTGCTGCACCTGATGGACCCTTCCTCCGATTCGTGCAAGGTGCCCTTAATCCTCTGCAGCAGTTTGTCTCTGACGGGTGCCACCTCACCAGAGAAACAGGCGAAATCATCAGGGATGCTGGGTTCTCGAGCTTGGACCTGAACACGACTCGCCTGTCTACTGCATTTATCCTCAGCCCCCATGTTTATGGAGTAGCATGTAAATGATATTTCCTCTCCTTTCGTTGTTCCATCTAATTGTGTAAATTGTTATTTGTCAGCAATATGAGCTACAGTATCACGCTAGGTTTCCAAGGCTGAATATTCCATGCCACACGTTAGATGGGCTGGTCTTCAGAAATGGCTGGATGCCTCGAAGATATTAAATGGGCCTTTTCTGTTAACATTTCGTTGCTGTTGGGCTGGGCCCGTGTCCTGTCTGCTGATTTCTTGCAAAAAAAAAAAAAGA]


>consensus_2472#0 GCCACCACAAAGACGAGGCCCCCGTCCTCCGCCGCTCGTCGACGGCATGCAGCAGCAGGG CGCCGCCGCGCTCACGCCGGCGACCGGCCTCGGGAGCCGGCCATCCCTCACCGTCAAAAC CAGCCGCGTGTGCACCACCGCTGCTCTCCCTCCCCTCTGCCGCTGTGGCCGGCGCCACCT CATCGGCTCCACCTCGGCCACCGCTCTCCTCCCCCTGCTCGCCCTCCCGTCGCCCGCCGC CTCGCCCGTCGACCCCGAAGTGATGCTTGAGCGGGTGCACCCTGCCAGGCCGGAGTGGTA CGAGAAGTTCTATGCCACGGCCATGGACAAGTTCATGAAACCTTACGAGGCTGAGATTGC ACAGTATAAATCAAAGCTCTTTTCCCAATTGATGACTGCTGGGAAGAACATTCTTGAACT TGGTGTTGGAACAGGCCCTAATCTCAAGTACTATGCAAATGCCGATGGCGTTAACATAGT TGGGGTGGATCCTAATAAACACATGGAGGAGTATGCCAGAGCAGCTGCAGTGTCTGCTGG ACTTCCACCTTCGAACTTCACCTTCAGAAGAGGGGTTGGTGAAGCTTTGCCAGCTGAGGA CAATTCAATGGATGCTGTTGTTGGCACTCTGGTAATGTGTTCTGTAAGTGACGTTGAAAT GGCATTGAGAGAAATAAAACGAGTCCTGAAGCCTGGTGGTCTCTACATATTCATTGAGCA TGTTGCTGCGCCTGATGGATCCTTCCTCCGATTCGTGCAAGGTGCCCTTAATCCTCTGCA GCAGTTTGTCTCTGACGGGTGCCACCTCACCAGAGAAACAGGCGAAATCATCAGGGATGC TGGGTTCTCGAGCTTGGACCTGAACACGACTCGCTTGTCTACTGCATTTATCCTCAGCCC CCATGTTTATGGAGTAGCATGTAAATGATATTTCCTCTCCTTTCGTTGTTCCATCTAATT GTGTAAATTGTTATTTGTCAGCAATATGAGCTACAGTATCACGCTAGGTTTCCAAGGCTG AATATTCCATGCCACACGTTAGATGGGCTGGTCTTCAGAAATGGCTGGATGCCTCGAAGA TATTAAATGGGCCTTTTCTGTTAACATTTCGTTGCTGTTGGGCTGGGCCCGTGTCCTGTC TGCTGATTTCTTGCAAAAAAAAAAAAAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)