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Oryza sativa
cluster # 2481 cluster # 2481       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2481#0 length = 1916 sequences # 1  
consensus_2481#1 length = 1495 sequences # 1  

consensusID : consensus_2481#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1916
fasta sequence
                              [CGAGGTTAAAGGGGAAGAACTGAAGAAGGAAGGGAACCCATCACCTCATCAAATCTGCCTGTCTTGATTGTGCATTTTGGACTCTTCGATCCATGTCTGCGTGAAGAATTTTCAGCTTCTACTCAGTAAGAGATCAAAACGCGATTTAAAAAAACTGGAATTCCGTCCGCGCAAATCCACGCGTGGATCAGCGAGGATGGTGATGCCAATGCCGACGGAGGGCAGCGAGCCACTTCTCCCGAGGAAGCAGAGGGACGGCGGTGACGACGGCGCCGCCTCGTCGCACGACCACTTCGACGGCGCGTCCTTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCGTCGGCGCCGGCATCATGGCGCTCCCGGCCACCATGAAGGTGCTCGGCCTCGTGCCGGGCCTCATCCTGGTGATGCTCGCCGCGGTGCTCACGGACGCCTCCATCGAGCTCCTCGTCCGGTTCAGCCGCGCCGTGGGCGCCACCTCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGCTCCTCCAGCTCTGCGTCGTCGTCAACAACGTCGGCGTGATGGTCGTCTACATGATCATCATCGGCGATGTGCTCTCTGGGAAGTCATCCAGCGGCGGCGTGCACCATCACGGCGTGATAGAAGGATGGTTCGGTCCAAACCGGTGGAACGGCCGCTTCTCCATCCTCGTCATCGTCACGCTCGGTGTGTTCACTCCACTGACATGCTTCAAGCGAGTCGATTCACTGAAATACACGTCGGCCTTATCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGCCGGAATCACCACCATCAAGCTGATGAGAGGGCAGATTCCGATGCCTAAACTGTTCCCTGATGTTCATGACTGGAGCTCCACCTGGAGACTTTTCACTGCAGCTCCAGTTCTTGTGACCGCCTACATTTGCCATTACAACGTGCACCCAATTCACAACGAGCTCAAGGACCACTCCCAGATCAGGCCAATAGTGCGGGCGTCGCTGCTGCTCTGCTTGGCCGTGTACACCACCACCAGCTTCTTCGGCTTCCTCCTCTTCGGCGAGGCAACGCTGGACGACGTGCTCGCAAACTTCGACTCCGACCTCGGCATCCCCTACAGCTTGGTGCTCGACGACGCCGTCAGGGTCAGCTACGTGCTCCACCTCATGCTCGTCTTCCCCATTGTGTTCCACGCGCTGCGGTTCAACATGGACGGCCTCCTCTTCCCCTCGGCGAGGCCCCTCTCTTCCGACAACCGGAGGTTCGGCGCGATCACGGCGGCGCTCCTCACGGTCATCTTCCTCGCCGCCAACTTCGTCCCCAACATTTGGGACGCGTTCCAGTTCACTGGCGCCACTGCCGCCGTCGCCATTGCCTACATTTTCCCTGCTGGAATGGCACTGAGGGATCGCCACGGCATAGCGACGAAGGGCGACAAGTATCTCGCGGTGTTCATGATTGTTCTTGCTTTGGTGGCAAATGGAGTGGCCGTGTACAGCGACGCTTGCTTGGGGACGTTTTAGTTGGCGATCGCACATCTCCGTGGTGATCTGTGCATTAGTTAGTGCGATATGAAAAATTCGTTGTTTGCACGTTGAACTCAACCATTTTGAGTTCCATTTATAATAAGTACATATGTACAAATTGCCTGCAGGTTCTGCAGAGATAGGTGTAGATAAGAATGCAGCGGTGAAAAAAAAATTCTAAACCGTGAATTTGTAGACCTTTTCTTGTTACTGACAAATTGGTTGTTCTATACATGTCCAAACGGTACTGGACAAGAACTGATCAGTTCATGTTGATTTTGGTGATAATTAAAGTCACTGGGATTCGATTGGTGTAGTTGGCATTTCTTTTACGTAAGGTAGTCTGCATAATCAGATATTCAGATGGTGC]

[+] EMBL AK069154             [CGAGGTTAAAGGGGAAGAACTGAAGAAGGAAGGGAACCCATCACCTCATCAAATCTGCCTGTCTTGATTGTGCATTTTGGACTCTTCGATCCATGTCTGCGTGAAGAATTTTCAGCTTCTACTCAGTAAGAGATCAAAACGCGATTTAAAAAAACTGGAATTCCGTCCGCGCAAATCCACGCGTGGATCAGCGAGGATGGTGATGCCAATGCCGACGGAGGGCAGCGAGCCACTTCTCCCGAGGAAGCAGAGGGACGGCGGTGACGACGGCGCCGCCTCGTCGCACGACCACTTCGACGGCGCGTCCTTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCGTCGGCGCCGGCATCATGGCGCTCCCGGCCACCATGAAGGTGCTCGGCCTCGTGCCGGGCCTCATCCTGGTGATGCTCGCCGCGGTGCTCACGGACGCCTCCATCGAGCTCCTCGTCCGGTTCAGCCGCGCCGTGGGCGCCACCTCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGCTCCTCCAGCTCTGCGTCGTCGTCAACAACGTCGGCGTGATGGTCGTCTACATGATCATCATCGGCGATGTGCTCTCTGGGAAGTCATCCAGCGGCGGCGTGCACCATCACGGCGTGATAGAAGGATGGTTCGGTCCAAACCGGTGGAACGGCCGCTTCTCCATCCTCGTCATCGTCACGCTCGGTGTGTTCACTCCACTGACATGCTTCAAGCGAGTCGATTCACTGAAATACACGTCGGCCTTATCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGCCGGAATCACCACCATCAAGCTGATGAGAGGGCAGATTCCGATGCCTAAACTGTTCCCTGATGTTCATGACTGGAGCTCCACCTGGAGACTTTTCACTGCAGCTCCAGTTCTTGTGACCGCCTACATTTGCCATTACAACGTGCACCCAATTCACAACGAGCTCAAGGACCACTCCCAGATCAGGCCAATAGTGCGGGCGTCGCTGCTGCTCTGCTTGGCCGTGTACACCACCACCAGCTTCTTCGGCTTCCTCCTCTTCGGCGAGGCAACGCTGGACGACGTGCTCGCAAACTTCGACTCCGACCTCGGCATCCCCTACAGCTTGGTGCTCGACGACGCCGTCAGGGTCAGCTACGTGCTCCACCTCATGCTCGTCTTCCCCATTGTGTTCCACGCGCTGCGGTTCAACATGGACGGCCTCCTCTTCCCCTCGGCGAGGCCCCTCTCTTCCGACAACCGGAGGTTCGGCGCGATCACGGCGGCGCTCCTCACGGTCATCTTCCTCGCCGCCAACTTCGTCCCCAACATTTGGGACGCGTTCCAGTTCACTGGCGCCACTGCCGCCGTCGCCATTGCCTACATTTTCCCTGCTGGAATGGCACTGAGGGATCGCCACGGCATAGCGACGAAGGGCGACAAGTATCTCGCGGTGTTCATGATTGTTCTTGCTTTGGTGGCAAATGGAGTGGCCGTGTACAGCGACGCTTGCTTGGGGACGTTTTAGTTGGCGATCGCACATCTCCGTGGTGATCTGTGCATTAGTTAGTGCGATATGAAAAATTCGTTGTTTGCACGTTGAACTCAACCATTTTGAGTTCCATTTATAATAAGTACATATGTACAAATTGCCTGCAGGTTCTGCAGAGATAGGTGTAGATAAGAATGCAGCGGTGAAAAAAAAATTCTAAACCGTGAATTTGTAGACCTTTTCTTGTTACTGACAAATTGGTTGTTCTATACATGTCCAAACGGTACTGGACAAGAACTGATCAGTTCATGTTGATTTTGGTGATAATTAAAGTCACTGGGATTCGATTGGTGTAGTTGGCATTTCTTTTACGTAAGGTAGTCTGCATAATCAGATATTCAGATGGTGC]


>consensus_2481#0 CGAGGTTAAAGGGGAAGAACTGAAGAAGGAAGGGAACCCATCACCTCATCAAATCTGCCT GTCTTGATTGTGCATTTTGGACTCTTCGATCCATGTCTGCGTGAAGAATTTTCAGCTTCT ACTCAGTAAGAGATCAAAACGCGATTTAAAAAAACTGGAATTCCGTCCGCGCAAATCCAC GCGTGGATCAGCGAGGATGGTGATGCCAATGCCGACGGAGGGCAGCGAGCCACTTCTCCC GAGGAAGCAGAGGGACGGCGGTGACGACGGCGCCGCCTCGTCGCACGACCACTTCGACGG CGCGTCCTTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCGTCGGCGCCGGCATCAT GGCGCTCCCGGCCACCATGAAGGTGCTCGGCCTCGTGCCGGGCCTCATCCTGGTGATGCT CGCCGCGGTGCTCACGGACGCCTCCATCGAGCTCCTCGTCCGGTTCAGCCGCGCCGTGGG CGCCACCTCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGCTCCT CCAGCTCTGCGTCGTCGTCAACAACGTCGGCGTGATGGTCGTCTACATGATCATCATCGG CGATGTGCTCTCTGGGAAGTCATCCAGCGGCGGCGTGCACCATCACGGCGTGATAGAAGG ATGGTTCGGTCCAAACCGGTGGAACGGCCGCTTCTCCATCCTCGTCATCGTCACGCTCGG TGTGTTCACTCCACTGACATGCTTCAAGCGAGTCGATTCACTGAAATACACGTCGGCCTT ATCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGCCGGAATCACCACCATCAAGCT GATGAGAGGGCAGATTCCGATGCCTAAACTGTTCCCTGATGTTCATGACTGGAGCTCCAC CTGGAGACTTTTCACTGCAGCTCCAGTTCTTGTGACCGCCTACATTTGCCATTACAACGT GCACCCAATTCACAACGAGCTCAAGGACCACTCCCAGATCAGGCCAATAGTGCGGGCGTC GCTGCTGCTCTGCTTGGCCGTGTACACCACCACCAGCTTCTTCGGCTTCCTCCTCTTCGG CGAGGCAACGCTGGACGACGTGCTCGCAAACTTCGACTCCGACCTCGGCATCCCCTACAG CTTGGTGCTCGACGACGCCGTCAGGGTCAGCTACGTGCTCCACCTCATGCTCGTCTTCCC CATTGTGTTCCACGCGCTGCGGTTCAACATGGACGGCCTCCTCTTCCCCTCGGCGAGGCC CCTCTCTTCCGACAACCGGAGGTTCGGCGCGATCACGGCGGCGCTCCTCACGGTCATCTT CCTCGCCGCCAACTTCGTCCCCAACATTTGGGACGCGTTCCAGTTCACTGGCGCCACTGC CGCCGTCGCCATTGCCTACATTTTCCCTGCTGGAATGGCACTGAGGGATCGCCACGGCAT AGCGACGAAGGGCGACAAGTATCTCGCGGTGTTCATGATTGTTCTTGCTTTGGTGGCAAA TGGAGTGGCCGTGTACAGCGACGCTTGCTTGGGGACGTTTTAGTTGGCGATCGCACATCT CCGTGGTGATCTGTGCATTAGTTAGTGCGATATGAAAAATTCGTTGTTTGCACGTTGAAC TCAACCATTTTGAGTTCCATTTATAATAAGTACATATGTACAAATTGCCTGCAGGTTCTG CAGAGATAGGTGTAGATAAGAATGCAGCGGTGAAAAAAAAATTCTAAACCGTGAATTTGT AGACCTTTTCTTGTTACTGACAAATTGGTTGTTCTATACATGTCCAAACGGTACTGGACA AGAACTGATCAGTTCATGTTGATTTTGGTGATAATTAAAGTCACTGGGATTCGATTGGTG TAGTTGGCATTTCTTTTACGTAAGGTAGTCTGCATAATCAGATATTCAGATGGTGC



consensusID : consensus_2481#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1495
fasta sequence
                              [ACCAGATATAAAGCATCCCTCAACTTATAAAACCAGTACAAATCTCTGGCGGTTTTAACTCCGGTTTTGTCTGATGTGACAGCTGACTCAGCATGGGACCCACGTGTGCCCCACGCGTCAGCCTCTTCTTCCCCCTCCCCTCTCCACCTCTCTTCCTCTCTCTCCTCTTTTCTTCACGGACGCCGGTGGGGGAGCAGCTGCACGGCCGGCAGGCGGCGGGGTGAGGAGCCGCGCGCGTCCTTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCATCGGCGCGGGCATCATGGCGCTCCCGGCCACCATGAAGGTGCTCAGTCTCGTGCCGGGCCTCATCCTGGTGATGCTCGCCGCAGTGCTCACGGACGCCTCCATCGAGCTCCTCGTCTGGTTCAGCCGCGCTGTGGGCGCCACCTCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGATCCTCTAGCTCTGCGTCATCGTCAACAACGTCGGCGTGATGGTCAGCTTCACTGAACATTTCGTTGTGACTCTAATGGCTTGTGTTCTTTTTCCCTGGGATGAGTTCAGATCCACTGAAATACACGCCGGCCGTGTCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGTCGGAATCGCCACCATCAAGCTGATGAAAGGGCAGATTCCGATGCCTAAGCTGTTCCCTGATGTTCATGACTGGAGCTCCACCTGGAGACTTCCCACTGCAGCTCCAGTTCTTGTGAGTTGTGACTGCCTACATTTTCCATTACAACGGTACATTTTAATTACCAGCTAAGTTTGCATTTTTCTGTGGGAATGTGATTAACTTGCCACTGCATTCAGTGCACACAATTCACAACGAGCTCAAGGACCACTCCCTGATCAGGCCAATAGTGCGGGCGTCACTGCTACTCGGCTTGGTCGTGTACACCACCACCAGCTTCTTCGGCTTCCTCCTCTTCGGCGAGGCGACGCTGGACGACATGCTCGTCTTCCCCATCGTGTTCCGCGCGCTGCGATTCAACATGGACGGCCTCCTCTTCCCCTCAGCGAGGCCCTTCTCCTGCGACAACCGGAGGTTCGGCGCGATCACGGCGGAGCTCCTCACGGTCATCTTCCTCGCCGCCAACTTCGTCCCCAACATCTGGGACGCGTTCCAGTTCACTGGGAGTAGCTGCACGGGCGACGACGTCGACTGCGGAGGCGGTGGCGACAGCTGCCTCACGGCCGTAATCCTTGTGGCGGCAGCCGTGTCTCCGATGAGGCCGCGCTCCTCCAGCGCGAGCTCGACGCCGGTGGCGGGGAAGAAGGAGAAAACGGCGACGCGGTGGTGCTCGCAATCCACCGCGCCCCGATGTGAAAAGGCTGCGGCGGGTCACGGAATGCCGCCGCCAGCGCCGCCAGCCCGCCACCACCAACGCCCAACTCTGTCTGGGCCATCGCTGGCGACGTGACCCCCCTAGCCCCACCACCAGTGGCT]

[-] EMBL AK109890             [ACCAGATATAAAGCATCCCTCAACTTATAAAACCAGTACAAATCTCTGGCGGTTTTAACTCCGGTTTTGTCTGATGTGACAGCTGACTCAGCATGGGACCCACGTGTGCCCCACGCGTCAGCCTCTTCTTCCCCCTCCCCTCTCCACCTCTCTTCCTCTCTCTCCTCTTTTCTTCACGGACGCCGGTGGGGGAGCAGCTGCACGGCCGGCAGGCGGCGGGGTGAGGAGCCGCGCGCGTCCTTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCATCGGCGCGGGCATCATGGCGCTCCCGGCCACCATGAAGGTGCTCAGTCTCGTGCCGGGCCTCATCCTGGTGATGCTCGCCGCAGTGCTCACGGACGCCTCCATCGAGCTCCTCGTCTGGTTCAGCCGCGCTGTGGGCGCCACCTCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGATCCTCTAGCTCTGCGTCATCGTCAACAACGTCGGCGTGATGGTCAGCTTCACTGAACATTTCGTTGTGACTCTAATGGCTTGTGTTCTTTTTCCCTGGGATGAGTTCAGATCCACTGAAATACACGCCGGCCGTGTCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGTCGGAATCGCCACCATCAAGCTGATGAAAGGGCAGATTCCGATGCCTAAGCTGTTCCCTGATGTTCATGACTGGAGCTCCACCTGGAGACTTCCCACTGCAGCTCCAGTTCTTGTGAGTTGTGACTGCCTACATTTTCCATTACAACGGTACATTTTAATTACCAGCTAAGTTTGCATTTTTCTGTGGGAATGTGATTAACTTGCCACTGCATTCAGTGCACACAATTCACAACGAGCTCAAGGACCACTCCCTGATCAGGCCAATAGTGCGGGCGTCACTGCTACTCGGCTTGGTCGTGTACACCACCACCAGCTTCTTCGGCTTCCTCCTCTTCGGCGAGGCGACGCTGGACGACATGCTCGTCTTCCCCATCGTGTTCCGCGCGCTGCGATTCAACATGGACGGCCTCCTCTTCCCCTCAGCGAGGCCCTTCTCCTGCGACAACCGGAGGTTCGGCGCGATCACGGCGGAGCTCCTCACGGTCATCTTCCTCGCCGCCAACTTCGTCCCCAACATCTGGGACGCGTTCCAGTTCACTGGGAGTAGCTGCACGGGCGACGACGTCGACTGCGGAGGCGGTGGCGACAGCTGCCTCACGGCCGTAATCCTTGTGGCGGCAGCCGTGTCTCCGATGAGGCCGCGCTCCTCCAGCGCGAGCTCGACGCCGGTGGCGGGGAAGAAGGAGAAAACGGCGACGCGGTGGTGCTCGCAATCCACCGCGCCCCGATGTGAAAAGGCTGCGGCGGGTCACGGAATGCCGCCGCCAGCGCCGCCAGCCCGCCACCACCAACGCCCAACTCTGTCTGGGCCATCGCTGGCGACGTGACCCCCCTAGCCCCACCACCAGTGGCT]


>consensus_2481#1 ACCAGATATAAAGCATCCCTCAACTTATAAAACCAGTACAAATCTCTGGCGGTTTTAACT CCGGTTTTGTCTGATGTGACAGCTGACTCAGCATGGGACCCACGTGTGCCCCACGCGTCA GCCTCTTCTTCCCCCTCCCCTCTCCACCTCTCTTCCTCTCTCTCCTCTTTTCTTCACGGA CGCCGGTGGGGGAGCAGCTGCACGGCCGGCAGGCGGCGGGGTGAGGAGCCGCGCGCGTCC TTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCATCGGCGCGGGCATCATGGCGCTC CCGGCCACCATGAAGGTGCTCAGTCTCGTGCCGGGCCTCATCCTGGTGATGCTCGCCGCA GTGCTCACGGACGCCTCCATCGAGCTCCTCGTCTGGTTCAGCCGCGCTGTGGGCGCCACC TCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGATCCTCTAGCTC TGCGTCATCGTCAACAACGTCGGCGTGATGGTCAGCTTCACTGAACATTTCGTTGTGACT CTAATGGCTTGTGTTCTTTTTCCCTGGGATGAGTTCAGATCCACTGAAATACACGCCGGC CGTGTCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGTCGGAATCGCCACCATCAA GCTGATGAAAGGGCAGATTCCGATGCCTAAGCTGTTCCCTGATGTTCATGACTGGAGCTC CACCTGGAGACTTCCCACTGCAGCTCCAGTTCTTGTGAGTTGTGACTGCCTACATTTTCC ATTACAACGGTACATTTTAATTACCAGCTAAGTTTGCATTTTTCTGTGGGAATGTGATTA ACTTGCCACTGCATTCAGTGCACACAATTCACAACGAGCTCAAGGACCACTCCCTGATCA GGCCAATAGTGCGGGCGTCACTGCTACTCGGCTTGGTCGTGTACACCACCACCAGCTTCT TCGGCTTCCTCCTCTTCGGCGAGGCGACGCTGGACGACATGCTCGTCTTCCCCATCGTGT TCCGCGCGCTGCGATTCAACATGGACGGCCTCCTCTTCCCCTCAGCGAGGCCCTTCTCCT GCGACAACCGGAGGTTCGGCGCGATCACGGCGGAGCTCCTCACGGTCATCTTCCTCGCCG CCAACTTCGTCCCCAACATCTGGGACGCGTTCCAGTTCACTGGGAGTAGCTGCACGGGCG ACGACGTCGACTGCGGAGGCGGTGGCGACAGCTGCCTCACGGCCGTAATCCTTGTGGCGG CAGCCGTGTCTCCGATGAGGCCGCGCTCCTCCAGCGCGAGCTCGACGCCGGTGGCGGGGA AGAAGGAGAAAACGGCGACGCGGTGGTGCTCGCAATCCACCGCGCCCCGATGTGAAAAGG CTGCGGCGGGTCACGGAATGCCGCCGCCAGCGCCGCCAGCCCGCCACCACCAACGCCCAA CTCTGTCTGGGCCATCGCTGGCGACGTGACCCCCCTAGCCCCACCACCAGTGGCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2481#0      CGAGGTTAAAGGGGAAGAACTGAAGAAGGAAGGGAACCCATCACCTCATCAAATCTGCCT 60
consensus_2481#1      ---------------------ACCAGATATAAAGCATCCCTCAACTTATAAAACCAGTAC 39
                                                *   *  * * ** *** ** ** *** * *   

consensus_2481#0      GTCTTGATTGTGCATTTTGGACTCTTCGATCCATGTCTG-CGTGAAGAATTTTCAGCTTC 119
consensus_2481#1      AAATC--TCTGGCGGTTTTAACTC--CGGTTT-TGTCTGATGTGA--------CAGCT-- 84
                         *   *   **  ***  ****  ** *   ******  ****        *****  

consensus_2481#0      TACTCAGTAAGAGATCAAAACGCGATTTAAAAAAACTGGAATTCCGTCCGCGCAAATCCA 179
consensus_2481#1      GACTCAGCATGGGACCCACGTGTGCCCCACGCGTCAGCCTCTTCTTCCCCCTCCCCTCTC 144
                       ****** * * ** * *   * *    *            ***   ** * *   **  

consensus_2481#0      CGCGTGGATCAGCGAGGATGGTGATGCCAATGCCGACGGAGGGCAGCGAGCCACTTCTCC 239
consensus_2481#1      CACCTCTCTTCCTCTCTCTCCTCTTTTCTTCACGGACGCCGGTGGGGGAGCAGCTGCAC- 203
                      * * *   *         *  *  *  *    * ****  **   * ****  ** * * 

consensus_2481#0      CGAGGAAGCAGAGGGACGGCGGTGACGACGGCGCCGCCTCGTCGCACGACCACTTCGACG 299
consensus_2481#1      ------GGCCGGCAGGCGGCGG-GGTGA-GGAGCCGC----------------------- 232
                             ** *   * ****** *  ** ** *****                       

consensus_2481#0      GCGCGTCCTTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCGTCGGCGCCGGCATCA 359
consensus_2481#1      GCGCGTCCTTCTCCGGCGCGGTGTTCAACCTGTCCACCACCATCATCGGCGCGGGCATCA 292
                      ******************************************** ******* *******

consensus_2481#0      TGGCGCTCCCGGCCACCATGAAGGTGCTCGGCCTCGTGCCGGGCCTCATCCTGGTGATGC 419
consensus_2481#1      TGGCGCTCCCGGCCACCATGAAGGTGCTCAGTCTCGTGCCGGGCCTCATCCTGGTGATGC 352
                      ***************************** * ****************************

consensus_2481#0      TCGCCGCGGTGCTCACGGACGCCTCCATCGAGCTCCTCGTCCGGTTCAGCCGCGCCGTGG 479
consensus_2481#1      TCGCCGCAGTGCTCACGGACGCCTCCATCGAGCTCCTCGTCTGGTTCAGCCGCGCTGTGG 412
                      ******* ********************************* ************* ****

consensus_2481#0      GCGCCACCTCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGCTCC 539
consensus_2481#1      GCGCCACCTCGTACGGCGAGGCCATGGGCGACGCCTTCGGTGCTTTCGGCAGGGGGATCC 472
                      ******************************************************** ***

consensus_2481#0      TCCAGCTCTGCGTCGTCGTCAACAACGTCGGCGTGATGGTCGTCTACATGATCATCATCG 599
consensus_2481#1      TCTAGCTCTGCGTCATCGTCAACAACGTCGGCGTGATGGTCAGCT---------TCACTG 523
                      ** *********** **************************  **         ***  *

consensus_2481#0      GCGATGTGCTCTCTGGGAAGTCATCCAGCGGCGGCGTGCACCATCACGGCGTGATAGAAG 659
consensus_2481#1      ---------------------------------------AACATTTCGTTGTGACTCTA- 543
                                                             * ***  **  ****    * 

consensus_2481#0      GATGGTTCGGTCCAAACCGGTGGAACGGCCGCTTCTCCATCCTCGTCATCGTCACGCTCG 719
consensus_2481#1      -ATGGCTTG--------------------TGTTCTTTTTCCCTGG--------------G 568
                       **** * *                     * *  *    *** *              *

consensus_2481#0      GTGTGTTCACTCCACTGACATGCTTCAAGCGAGTCGATTCACTGAAATACACGTCGGCCT 779
consensus_2481#1      ATGAGTTCA--------------------------GATCCACTGAAATACACGCCGGCCG 602
                       ** *****                          *** ************** ***** 

consensus_2481#0      TATCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGCCGGAATCACCACCATCAAGC 839
consensus_2481#1      TGTCGGTTGCTCTGGCCGTCGTGTTCGTGGTGATCACTGTCGGAATCGCCACCATCAAGC 662
                      * ************************************* ******* ************

consensus_2481#0      TGATGAGAGGGCAGATTCCGATGCCTAAACTGTTCCCTGATGTTCATGACTGGAGCTCCA 899
consensus_2481#1      TGATGAAAGGGCAGATTCCGATGCCTAAGCTGTTCCCTGATGTTCATGACTGGAGCTCCA 722
                      ****** ********************* *******************************

consensus_2481#0      CCTGGAGACTTTTCACTGCAGCTCCAGTTCTTGTGA-------CCGCCTACATTTGCCAT 952
consensus_2481#1      CCTGGAGACTTCCCACTGCAGCTCCAGTTCTTGTGAGTTGTGACTGCCTACATTTTCCAT 782
                      ***********  ***********************       * ********** ****

consensus_2481#0      TACAACGTGCACCCAATTCACAACGAGCTCAAGGACCACTCCCAGATCAGGCCAATAGTG 1012
consensus_2481#1      TACAACG-GTACATT-TTAATTACCAGCTAAGTTTGCATTTTTCTGTGGG---AATGTGA 837
                      ******* * **    ** *  ** **** *     ** *      *  *   ***    

consensus_2481#0      CGGGCGTCGCTGCTGCTCTGCTTGGCCGTGTACACCACCACCAGCTTCTTCGGCTTCCTC 1072
consensus_2481#1      TTAAC-TTGCCACTGCATT------CAGTGCACACAATTCACAACGAGCTCAAGGACCAC 890
                          * * **  ****  *      * *** **** *    ** *    **     ** *

consensus_2481#0      CTCTTCGGCGAGGCAACGCTGGACGACGTGCTCGCAAACTTCGACTCCGACCTCGGCATC 1132
consensus_2481#1      TCCCTGATCAGGCCAATAGTGCG-GGCGTCACTGCTA--CTCGGCTTGGTCGTGTACACC 947
                        * *   *  * ***   **   * ***    ** *   *** **  * * *   ** *

consensus_2481#0      CCCTACAGCTTGGTGCTCGACGACGCCGTCAGGGTCAGCTACGTGCTCCACCTCATGCTC 1192
consensus_2481#1      ACCACCAGCTTC---TTCGGCTTCCTCCTCTTCGGCGAGGCGACGCTGGACGACATGCTC 1004
                       **  ******     *** *  *  * **   * *        ***  **  *******

consensus_2481#0      GTCTTCCCCATTGTGTTCCACGCGCTGCGGTTCAACATGGACGGCCTCCTCTTCCCCTCG 1252
consensus_2481#1      GTCTTCCCCATCGTGTTCCGCGCGCTGCGATTCAACATGGACGGCCTCCTCTTCCCCTCA 1064
                      *********** ******* ********* ***************************** 

consensus_2481#0      GCGAGGCCCCTCTCTTCCGACAACCGGAGGTTCGGCGCGATCACGGCGGCGCTCCTCACG 1312
consensus_2481#1      GCGAGGCCCTTCTCCTGCGACAACCGGAGGTTCGGCGCGATCACGGCGGAGCTCCTCACG 1124
                      ********* **** * ******************************** **********

consensus_2481#0      GTCATCTTCCTCGCCGCCAACTTCGTCCCCAACATTTGGGACGCGTTCCAGTTCACTGGC 1372
consensus_2481#1      GTCATCTTCCTCGCCGCCAACTTCGTCCCCAACATCTGGGACGCGTTCCAGTTCACTGGG 1184
                      *********************************** *********************** 

consensus_2481#0      GCCACTGCCGCCGTCGCCATTGCCTACATTTTCCCTGCTGGAATGGCACTGAGGGAT-CG 1431
consensus_2481#1      AGTAGCTGCACGGGCGACGACGTCGAC--------TGCGGAGGCGGTGGCGACAGCTGCC 1236
                         *    * * * ** *   * * **        *** *    **    **  * * * 

consensus_2481#0      CCACGGCATAGCGACGAAGGGCGACAAGTATCTCGCGGTGTTCATGATTGTTCTTGCTTT 1491
consensus_2481#1      TCACGGCCGTAATCCTTGTGGCGGCAGCCGTGTCTCCGA---TGAGGCCGCGCTC-CTCC 1292
                       ******       *    **** **    * ** * *       *   *  **  **  

consensus_2481#0      GGTGGCAAATGGAG--TGGCCGTGTACAGCGACGCTTGCTTGGGGACGTTTTAGTTGGCG 1549
consensus_2481#1      AGCGCGAGCTCGACGCCGGTGGCGGGGAAGAAGGAGAAAACGGCGACGC----GGTGGTG 1348
                       * *  *  * **    **  * *   *   * *       ** ****     * *** *

consensus_2481#0      ATCGCACATCTCCGTGGTGATCTGTGCATTAGTTAGTGCGATATGAAAAAT-TCGTTGTT 1608
consensus_2481#1      CTCGCAATCCACCGCGCCCCGATGTGAAAAGGCTGCGGCGGGTCACGGAATGCCGCCGCC 1408
                       *****   * *** *      **** *   * *   ***        ***  **  *  

consensus_2481#0      TGCACGTTGAACTCAACCATTTTGAGTTCCATTTATAATAAGTACATATGT----ACAAA 1664
consensus_2481#1      AGCGCCGCCAGCCCGCCACCACCAACGCCCAACTCTGTCTGGGCCATCGCTGGCGACGTG 1468
                       ** *    * * *  *       *   ***  * *     *  ***   *    **   

consensus_2481#0      TTGCCTGCAGGTTCTGCAGAGATAGGTGTAGATAAGAATGCAGCGGTGAAAAAAAAATTC 1724
consensus_2481#1      ACCCCCCTAGCCCCACCACCAGTGGCT--------------------------------- 1495
                         **   **   *  **    * * *                                 

consensus_2481#0      TAAACCGTGAATTTGTAGACCTTTTCTTGTTACTGACAAATTGGTTGTTCTATACATGTC 1784
consensus_2481#1      ------------------------------------------------------------
                                                                                  

consensus_2481#0      CAAACGGTACTGGACAAGAACTGATCAGTTCATGTTGATTTTGGTGATAATTAAAGTCAC 1844
consensus_2481#1      ------------------------------------------------------------
                                                                                  

consensus_2481#0      TGGGATTCGATTGGTGTAGTTGGCATTTCTTTTACGTAAGGTAGTCTGCATAATCAGATA 1904
consensus_2481#1      ------------------------------------------------------------
                                                                                  

consensus_2481#0      TTCAGATGGTGC 1916
consensus_2481#1      ------------
                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)