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Oryza sativa
cluster # 2485 cluster # 2485       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2485#0 length = 1412 sequences # 2  

consensusID : consensus_2485#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1412
fasta sequence
                              [TATTCTGCTTCTTCAGGTAAGTCGGCGTCGAGCTGATTTGTTAACGGGTAGGACGACGTCAAGAGCGGTAGCTCGAGCTCCGTTCGCAGCCATGGCGGATGAGCATGAGTGGTGGAATAGCCCTTGCTCTGCGCGCACCGGCGACGACGAAGCCGCGTGCTCGACGGCGGACGCCGATGAGTCAGCGGTTGGGAGTACTCCGATGAGCTTCGGCCATGGCGGCCAGCCTGCTAGTTTATCTGACGCCGCCGCCTCCTCGTCGTCGTCATCGTTCCTTCTTGCCGGACAACACATGGATTATTGGACGCAGGACTTCATGGGAGGTAGAGCAGCGGCAGCGGCCACCGCGAGCTTCGACACGCTGCTCCAGCTCCAGCTCCAAGGCGGCGACGCGGCGAGCCGCCGCTTGCTGCTCGGCGACCACGCCGCAGCGCCGCCGCGTCACCTCGTCGTGCCAGGGGCGCCCTACGGCGGCGGCGGCGGTGATGACACGGCGGCGCCGCCGCGAGGCTTGTCACCGACACCGTACGAGGCGGCCGACAACCTGCAGCAGCAGCAATCGTTCCCCGGCGGCCACCACGTCGTCGTAGGCTCGTCGTCGGGGCTCTTCCGGCCGGCGACGACGGCGCCGCCGCCGCAGTTTCTCTTGCAGGCGTGACAATGATCTTAGTTATTAGTATCTACTTAGCTAGGGTTTCTTCTAAATTGGTTTCTGATGGTGCAGTCCAACACGGATCGCCTCCATGATCATCATCAAGACGCCGGCTCGCCGTCGCCGGCGACGAGAAGCTCTCCTGGCTCGCCGGCGGCAGCGAAGAAACCACGGATCGAGGCGCCGTCGCCGATGCCGACTTTCAAGGTGAGGAAAGAGAAGCTCGGGGACAGAATCACTGCGCTCCAGCAACTCGTCTCGCCTTTTGGAAAGACGGATACCGCATCGGTTCTTCACGAGGCCATCGAATACATCAAGTTCCTTCACGATCAAGTTGCCTCTCTGAGCTCACCGTACCTGAGGTGTGGGCGCCCTGTGCAGCTACAACACCAACAGGGTTCCCATAAGGTGAATGGTAACTGTGAGGGGAAGCAGCTGGACTTGCGCAGCCGAGGCTTGTGCCTTGTTCCGGTTGCGAGCACTTATACTGTGGCCAGTGAGACTGCGACAGAGTTTTGGCACCCTACCTTTGGAGGCACATTTCGGTAGTAATTAACTAGCTAGATACTAACTGTGGCCATGACAGTGGGAGATCTAGGAAATTTTTAGAGCCCAGCTTAGCTGATGAATTAACCCAACTACTACAGTGGTGCACATGCATGGTGCAAGGTGTCAGCTGCTCTCTCTTGCATGCATATGGTGAGCTCTAGCAGTTGCCACAGGATCATTTGGTCTAGTAGGGGCAGTCGCTTGAGATATA]

[+] EMBL CB668118             [TATTCTGCTTCTTCAGGTAAGTCGGCGTCGAGCTGATTTGTTAACGGGTAGGACGACGTCAAGAGCGGTAGCTCGAGCTCCGTTCGCAGCCATGGCGGATGAGCATGAGTGGTGGAATAGCCCTTGCTCTGCGCGCACCGGCGACGACGAAGCCGCGTGCTCGACGGCGGACGCCGATGAGTCAGCGGTTGGGAGTACTCCGATGAGCTTCGGCCATGGCGGCCAGCCTGCTAGTTTATCTGACGCCGCCGCCTCCTCGTCGTCGTCATCGTTCCTTCTTGCCGGACAACACATGGATTATTGGACGCAGGACTTCATGGGAGGTAGAGCAGCGGCAGCGGCCACCGCGAGCTTCGACACGCTGCTCCAGCTCCAGCTCCAAGGCGGCGACGCGGCGAGCCGCCGCTTGCTGCTCGGCGACCACGCCGCAGCGCCGCCGCGTCACCTCGTCGTGCCAGGGGCGCCCTACGGCGGCGGCGGCGGTGATGACACGGCGGCGCCGCCGCGAGGCTTGTCACCGACACCGTACGAGGCGGCCGACAACCTGCAGCAGCAGCAATCGTTCCCCGGCGGCCACCACGTCGTCGTAGGCTCGTCGTCGGGGCTCTTCCGGCCGGCGACGACGGCGCCGCCGCCGCAGTTTCTCTTGCAGGCGTGACAATGATCTTAGTTATTAGTATCTACTTAGCTAGGGTTTCTTCTAAATTGGTTTCTGATGGTGCAGTCCAACACGGATCGCCTCCATGATCATCATCAAGACGCCGGCTCGCCGTCGCCGGCGACGAGAAGCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB668119             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AATGATCTTAGTTATTAGTATCTACTTAGCTAGGGTTTCTTCTAAATTGGTTTCTGATGGTGCAGTCCAACACGGATCGCCTCCATGATCATCATCAGGACGCCGGCTCGCCGTCGCCGGCGACGAGAAGCTCTCCTGGCTCGCCGGCGGCAGCGAAGAAACCACGGATCGAGGCGCCGTCGCCGATGCCGACTTTCAAGGTGAGGAAAGAGAAGCTCGGGGACAGAATCACTGCGCTCCAGCAACTCGTCTCGCCTTTTGGAAAGACGGATACCGCATCGGTTCTTCACGAGGCCATCGAATACATCAAGTTCCTTCACGATCAAGTTGCCTCTCTGAGCTCACCGTACCTGAGGTGTGGGCGCCCTGTGCAGCTACAACACCAACAGGGTTCCCATAAGGTGAATGGTAACTGTGAGGGGAAGCAGCTGGACTTGCGCAGCCGAGGCTTGTGCCTTGTTCCGGTTGCGAGCACTTATACTGTGGCCAGTGAGACTGCGACAGAGTTTTGGCACCCTACCTTTGGAGGCACATTTCGGTAGTAATTAACTAGCTAGATACTAACTGTGGCCATGACAGTGGGAGATCTAGGAAATTTTTAGAGCCCAGCTTAGCTGATGAATTAACCCAACTACTACAGTGGTGCACATGCATGGTGCAAGGTGTCAGCTGCTCTCTCTTGCATGCATATGGTGAGCTCTAGCAGTTGCCACAGGATCATTTGGTCTAGTAGGGGCAGTCGCTTGAGATATA]


>consensus_2485#0 TATTCTGCTTCTTCAGGTAAGTCGGCGTCGAGCTGATTTGTTAACGGGTAGGACGACGTC AAGAGCGGTAGCTCGAGCTCCGTTCGCAGCCATGGCGGATGAGCATGAGTGGTGGAATAG CCCTTGCTCTGCGCGCACCGGCGACGACGAAGCCGCGTGCTCGACGGCGGACGCCGATGA GTCAGCGGTTGGGAGTACTCCGATGAGCTTCGGCCATGGCGGCCAGCCTGCTAGTTTATC TGACGCCGCCGCCTCCTCGTCGTCGTCATCGTTCCTTCTTGCCGGACAACACATGGATTA TTGGACGCAGGACTTCATGGGAGGTAGAGCAGCGGCAGCGGCCACCGCGAGCTTCGACAC GCTGCTCCAGCTCCAGCTCCAAGGCGGCGACGCGGCGAGCCGCCGCTTGCTGCTCGGCGA CCACGCCGCAGCGCCGCCGCGTCACCTCGTCGTGCCAGGGGCGCCCTACGGCGGCGGCGG CGGTGATGACACGGCGGCGCCGCCGCGAGGCTTGTCACCGACACCGTACGAGGCGGCCGA CAACCTGCAGCAGCAGCAATCGTTCCCCGGCGGCCACCACGTCGTCGTAGGCTCGTCGTC GGGGCTCTTCCGGCCGGCGACGACGGCGCCGCCGCCGCAGTTTCTCTTGCAGGCGTGACA ATGATCTTAGTTATTAGTATCTACTTAGCTAGGGTTTCTTCTAAATTGGTTTCTGATGGT GCAGTCCAACACGGATCGCCTCCATGATCATCATCAAGACGCCGGCTCGCCGTCGCCGGC GACGAGAAGCTCTCCTGGCTCGCCGGCGGCAGCGAAGAAACCACGGATCGAGGCGCCGTC GCCGATGCCGACTTTCAAGGTGAGGAAAGAGAAGCTCGGGGACAGAATCACTGCGCTCCA GCAACTCGTCTCGCCTTTTGGAAAGACGGATACCGCATCGGTTCTTCACGAGGCCATCGA ATACATCAAGTTCCTTCACGATCAAGTTGCCTCTCTGAGCTCACCGTACCTGAGGTGTGG GCGCCCTGTGCAGCTACAACACCAACAGGGTTCCCATAAGGTGAATGGTAACTGTGAGGG GAAGCAGCTGGACTTGCGCAGCCGAGGCTTGTGCCTTGTTCCGGTTGCGAGCACTTATAC TGTGGCCAGTGAGACTGCGACAGAGTTTTGGCACCCTACCTTTGGAGGCACATTTCGGTA GTAATTAACTAGCTAGATACTAACTGTGGCCATGACAGTGGGAGATCTAGGAAATTTTTA GAGCCCAGCTTAGCTGATGAATTAACCCAACTACTACAGTGGTGCACATGCATGGTGCAA GGTGTCAGCTGCTCTCTCTTGCATGCATATGGTGAGCTCTAGCAGTTGCCACAGGATCAT TTGGTCTAGTAGGGGCAGTCGCTTGAGATATA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)